Contacts of the helix formed by residues 118 - 211 (chain A) in PDB entry 1IK9
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with ASN 118 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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116A VAL* 2.8 19.1 - - - +
117A GLU* 1.3 79.6 + - + +
119A PRO* 1.3 68.0 - - - +
120A ALA* 3.3 2.7 - - - -
121A GLU* 3.0 54.3 + - + +
122A VAL* 3.2 15.8 + - - +
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Residues in contact with PRO 119 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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40A HIS 3.1 28.5 - - - +
41A SER* 3.9 18.4 - - - +
42A ALA* 4.5 8.7 - - + +
115A LYS* 6.0 2.0 - - - -
116A VAL* 3.7 18.7 - - + +
117A GLU 3.3 9.6 - - - +
118A ASN* 1.3 87.1 - - - +
120A ALA* 1.3 54.0 + - + +
122A VAL* 2.9 5.8 + - + +
123A ILE* 2.7 39.7 + - + +
40B HIS* 5.8 4.5 - - + -
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Residues in contact with ALA 120 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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118A ASN 3.3 0.6 - - - -
119A PRO* 1.3 81.3 - - + +
121A GLU* 1.3 58.6 + - - +
123A ILE* 3.9 1.0 - - - +
124A ARG* 2.8 56.6 + - - +
38B ASP* 3.9 6.3 - - - +
39B GLY 4.0 12.3 + - - -
40B HIS* 4.1 23.2 - - + -
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Residues in contact with GLU 121 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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118A ASN* 3.0 41.1 + - + +
120A ALA* 1.3 77.4 - - - +
122A VAL* 1.3 63.8 + - - +
124A ARG* 3.6 25.1 - - - +
125A GLU* 3.1 25.1 + - - +
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Residues in contact with VAL 122 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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21A GLN* 5.2 9.4 + - - +
35A THR* 4.0 27.8 - - + +
37A THR* 6.0 1.3 - - - -
42A ALA* 4.3 10.3 - - + -
44A THR* 5.5 1.3 - - - +
116A VAL* 4.0 22.9 - - + -
118A ASN* 3.5 20.4 - - - +
119A PRO 2.9 7.9 + - - +
121A GLU* 1.3 74.9 - - - +
123A ILE* 1.3 66.4 + - + +
125A GLU* 3.4 5.9 + - - +
126A LEU* 3.1 25.4 + - + +
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Residues in contact with ILE 123 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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37A THR* 3.7 24.2 - - + +
39A GLY* 3.7 26.0 - - - -
40A HIS 3.9 11.7 - - - +
41A SER 4.6 0.4 - - - +
42A ALA* 5.4 0.7 - - + -
119A PRO* 2.7 28.4 + - + +
120A ALA 3.9 3.1 - - - +
122A VAL* 1.3 74.7 - - + +
124A ARG* 1.3 64.2 + - - +
126A LEU* 3.1 9.6 + - - +
127A ILE* 2.9 43.9 + - + +
39B GLY* 3.6 25.1 - - - +
123B ILE* 3.6 18.2 - - + -
127B ILE* 4.5 5.4 - - + -
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Residues in contact with ARG 124 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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120A ALA* 2.8 38.5 + - - +
121A GLU* 3.6 32.2 - - - +
123A ILE* 1.3 74.5 - - - +
125A GLU* 1.3 56.9 + - - +
127A ILE* 4.6 0.7 - - - -
128A ALA* 2.8 30.4 + - - +
16B ILE* 3.6 35.6 - - - +
17B THR* 3.0 34.1 - - - +
19B PHE* 3.3 24.9 - - + -
38B ASP* 2.7 50.0 + - - +
39B GLY* 4.4 1.1 - - - -
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Residues in contact with GLU 125 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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3A ARG* 2.9 42.5 + - - -
21A GLN* 4.5 3.1 + - - -
121A GLU 3.1 17.9 + - - +
122A VAL* 3.7 5.8 - - - +
124A ARG* 1.3 72.9 - - - +
126A LEU* 1.3 62.5 + - - +
128A ALA* 3.2 7.5 + - + +
129A TYR* 2.8 30.7 + - - +
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Residues in contact with LEU 126 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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5A ILE* 3.5 27.2 - - + +
19A PHE* 5.1 3.6 - - + -
20A LEU 6.0 0.2 - - - -
21A GLN* 3.4 38.6 - - + +
35A THR* 6.0 2.0 - - + -
37A THR* 4.4 23.1 - - + -
122A VAL* 3.1 17.3 + - + +
123A ILE* 3.4 9.9 - - - +
125A GLU* 1.3 75.9 + - - +
127A ILE* 1.3 71.3 + - + +
129A TYR* 3.1 6.4 + - - +
130A ALA* 3.0 22.0 + - + +
127B ILE* 4.0 32.5 - - + -
131B LEU* 5.9 0.2 - - + -
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Residues in contact with ILE 127 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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123A ILE* 2.9 39.1 + - + +
124A ARG* 3.8 4.0 - - - +
126A LEU* 1.3 77.1 - - - +
128A ALA* 1.3 63.9 + - - +
130A ALA* 3.2 7.0 + - + +
131A LEU* 2.9 30.2 + - + +
19B PHE* 3.8 36.6 - - + -
37B THR* 5.5 4.3 - - + -
39B GLY* 5.2 4.3 - - - -
123B ILE* 4.3 8.3 - - + -
126B LEU* 3.8 27.6 - - + -
127B ILE* 3.7 28.3 - - + -
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Residues in contact with ALA 128 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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124A ARG 2.8 19.4 + - - +
125A GLU* 3.4 11.7 - - - +
126A LEU 3.1 0.2 - - - -
127A ILE* 1.3 77.4 - - - +
129A TYR* 1.3 61.6 + - - +
131A LEU* 3.4 2.0 + - - +
132A ASP* 3.0 22.8 + - - +
7B ARG* 3.4 35.5 + - - +
17B THR* 6.1 0.7 - - + -
19B PHE* 4.1 13.5 - - + -
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Residues in contact with TYR 129 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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2A GLU* 5.6 0.3 - - - -
3A ARG* 3.3 76.5 + - + +
5A ILE* 3.9 14.1 - - + -
125A GLU* 2.8 16.5 + - - +
126A LEU 3.4 7.4 - - - +
128A ALA* 1.3 75.7 - - - +
130A ALA* 1.3 64.8 + - - +
132A ASP* 3.3 11.7 + - + +
133A THR* 2.8 47.7 + - + +
134B ILE* 5.9 2.2 - - + -
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Residues in contact with ALA 130 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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5A ILE* 4.9 8.1 - - + -
126A LEU* 3.0 14.8 + - + +
127A ILE* 3.2 11.9 + - - +
129A TYR* 1.3 80.7 - - - +
131A LEU* 1.3 56.7 + - - +
133A THR* 3.1 4.4 + - - -
134A ILE* 2.9 34.3 + - - +
127B ILE* 6.3 0.7 - - + -
130B ALA* 3.8 25.1 - - + -
131B LEU* 5.0 4.7 - - + -
134B ILE* 3.8 17.3 - - + +
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Residues in contact with LEU 131 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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127A ILE* 2.9 24.3 + - + +
128A ALA 3.8 4.5 - - - +
130A ALA* 1.3 76.5 - - - +
132A ASP* 1.3 64.0 + - - +
134A ILE* 3.4 21.9 + - + +
135A ALA* 3.0 23.0 + - - +
5B ILE* 3.7 58.1 - - + +
6B SER 4.6 4.9 - - - -
7B ARG* 4.5 11.2 - - + +
19B PHE* 3.9 24.5 - - + -
130B ALA* 4.7 5.6 - - + -
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Residues in contact with ASP 132 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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128A ALA* 3.0 13.4 + - - +
129A TYR* 3.6 14.2 - - + +
130A ALA 3.2 0.2 - - - -
131A LEU* 1.3 76.3 - - - +
133A THR* 1.3 58.5 + - - +
135A ALA* 3.2 7.9 + - - +
136A GLU* 2.9 40.6 + - + +
7B ARG* 2.7 33.9 + - - -
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Residues in contact with THR 133 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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129A TYR* 2.8 42.5 + - + +
130A ALA 3.1 8.0 + - - -
132A ASP* 1.3 74.5 - - - +
134A ILE* 1.3 65.5 + - - +
136A GLU* 3.3 16.9 + - - +
137A ASN* 3.0 32.7 + - - +
134B ILE* 3.8 33.7 - - + -
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Residues in contact with ILE 134 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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130A ALA 2.9 19.0 + - - +
131A LEU* 3.6 20.6 - - + +
133A THR* 1.3 75.4 - - - +
135A ALA* 1.3 60.7 + - - +
137A ASN* 3.6 7.0 + - - +
138A GLN* 3.1 48.4 + - - +
4B LYS* 5.9 3.1 - - - +
129B TYR* 5.1 5.4 - - + -
130B ALA* 3.8 34.5 - - + +
133B THR* 3.8 27.8 - - + +
134B ILE* 3.6 17.7 - - + +
137B ASN* 4.0 4.2 + - - +
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Residues in contact with ALA 135 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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131A LEU 3.0 13.3 + - - +
132A ASP* 3.3 13.2 - - - +
133A THR 3.0 0.2 - - - -
134A ILE* 1.3 76.2 - - - +
136A GLU* 1.3 65.3 + - + +
138A GLN* 3.2 14.4 + - - +
139A ALA* 3.2 21.7 + - - +
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Residues in contact with GLU 136 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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132A ASP* 2.9 29.9 + - + +
133A THR* 3.8 19.5 + - - +
135A ALA* 1.3 72.1 - - + +
137A ASN* 1.3 64.7 + - - +
139A ALA* 3.5 7.8 + - - +
140A LYS* 3.2 21.7 + - - +
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Residues in contact with ASN 137 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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133A THR* 3.0 36.2 + - - +
134A ILE* 3.7 5.7 - - - +
136A GLU* 1.3 77.1 - - - +
138A GLN* 1.3 61.8 + - - +
140A LYS* 3.0 12.8 + - - +
141A ASN* 2.8 34.0 + - - +
134B ILE* 4.0 16.8 + - - +
137B ASN* 3.9 31.4 - - + +
138B GLN* 3.7 21.3 + - - +
141B ASN* 5.7 4.4 + - - +
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Residues in contact with GLN 138 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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134A ILE* 3.1 28.0 + - - +
135A ALA* 3.2 13.7 + - - +
137A ASN* 1.3 75.3 - - - +
139A ALA* 1.3 65.4 + - - +
141A ASN* 3.1 8.3 + - - +
142A GLU* 2.8 37.2 + - + +
4B LYS* 4.4 17.1 + - - +
133B THR* 6.1 0.6 - - - +
137B ASN* 3.7 16.5 - - - +
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Residues in contact with ALA 139 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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135A ALA 3.2 9.3 + - - +
136A GLU* 3.6 11.9 - - - +
137A ASN 3.2 0.2 - - - -
138A GLN* 1.3 78.7 - - - +
140A LYS* 1.3 57.9 + - - +
142A GLU* 3.2 13.9 + - - +
143A HIS* 2.9 28.6 + - - +
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Residues in contact with LYS 140 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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136A GLU 3.2 10.2 + - - +
137A ASN* 3.0 13.8 + - - +
139A ALA* 1.3 79.8 - - - +
141A ASN* 1.3 57.9 + - - +
143A HIS* 3.2 9.1 + - + +
144A LEU* 3.0 37.7 + - + +
141B ASN* 3.1 35.6 + - - +
145B GLN* 3.7 18.2 + - - -
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Residues in contact with ASN 141 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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137A ASN* 2.8 22.4 + - - +
138A GLN* 3.7 6.2 - - - +
140A LYS* 1.3 73.0 - - - +
142A GLU* 1.3 58.3 + - + +
144A LEU* 3.5 7.0 + - - +
145A GLN* 2.9 28.4 + - - +
137B ASN* 3.4 36.7 + - - +
140B LYS* 4.1 13.4 - - - +
141B ASN* 3.1 39.3 + - - +
144B LEU* 4.0 12.9 - - + +
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Residues in contact with GLU 142 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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138A GLN* 2.8 26.7 + - + +
139A ALA* 3.5 12.8 - - - +
141A ASN* 1.3 76.6 - - + +
143A HIS* 1.3 65.2 + - - +
145A GLN* 3.2 7.2 + - - +
146A LYS* 3.1 42.1 + - - +
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Residues in contact with HIS 143 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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139A ALA 2.9 12.9 + - - +
140A LYS* 3.5 12.5 + - + +
142A GLU* 1.3 76.7 - - - +
144A LEU* 1.3 64.4 + - + +
146A LYS* 3.8 9.7 + - - +
147A GLU* 3.3 42.7 + - + +
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Residues in contact with LEU 144 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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140A LYS* 3.0 27.0 + - + +
141A ASN* 3.8 6.7 - - - +
143A HIS* 1.3 83.8 - - + +
145A GLN* 1.3 58.7 + - - +
146A LYS 3.3 0.4 - - - -
147A GLU* 3.8 4.5 - - + +
148A ASN* 2.9 27.0 + - - +
141B ASN* 3.5 44.4 - - - +
144B LEU* 4.4 29.4 - - + +
145B GLN* 3.8 24.2 - - - +
148B ASN* 4.5 17.7 + - - +
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Residues in contact with GLN 145 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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141A ASN 2.9 18.2 + - - +
142A GLU* 3.2 9.4 + - - +
144A LEU* 1.3 75.7 - - - +
146A LYS* 1.3 62.1 + - + +
148A ASN* 3.4 17.2 - - - +
149A GLU* 3.0 53.2 + - - +
144B LEU* 4.0 25.5 - - - +
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Residues in contact with LYS 146 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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142A GLU* 3.1 29.1 + - - +
143A HIS* 4.0 8.7 - - - +
145A GLN* 1.3 75.9 - - + +
147A GLU* 1.3 61.5 + - + +
148A ASN 3.0 1.6 - - - -
149A GLU* 3.2 15.5 + - - +
150A ARG* 2.8 31.0 + - - +
153A ARG* 5.3 0.9 + - - -
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Residues in contact with GLU 147 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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143A HIS* 3.3 38.2 + - + +
144A LEU* 3.8 7.4 - - + +
145A GLN 3.4 0.2 - - - -
146A LYS* 1.3 81.8 - - + +
148A ASN* 1.3 58.5 + - - +
150A ARG* 3.5 38.4 + - - +
151A LEU* 3.1 33.6 + - - +
148B ASN* 3.8 21.6 + - - +
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Residues in contact with ASN 148 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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144A LEU 2.9 17.6 + - - +
145A GLN* 3.4 21.8 - - - +
146A LYS 3.0 0.2 - - - -
147A GLU* 1.3 77.8 - - - +
149A GLU* 1.3 62.3 + - - +
151A LEU* 3.1 5.6 + - - +
152A LEU* 2.9 30.7 + - - +
144B LEU* 4.9 13.9 + - + +
147B GLU* 3.9 25.3 + - - +
148B ASN* 4.7 5.0 - - + +
151B LEU* 3.7 24.4 - - - +
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Residues in contact with GLU 149 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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145A GLN* 3.0 40.2 + - - +
146A LYS* 3.2 15.4 + - - +
148A ASN* 1.3 84.0 - - - +
150A ARG* 1.3 61.9 + - - +
152A LEU* 3.5 10.8 + - + +
153A ARG* 3.3 46.0 + - - +
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Residues in contact with ARG 150 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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146A LYS 2.8 17.6 + - - +
147A GLU* 3.5 35.4 + - - +
148A ASN 3.2 0.2 - - - -
149A GLU* 1.3 75.8 - - - +
151A LEU* 1.3 79.4 + - - +
153A ARG* 3.4 17.7 + - - +
154A ASP* 2.9 65.0 + - - +
152B LEU* 6.2 1.0 - - - +
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Residues in contact with LEU 151 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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147A GLU* 3.1 19.7 - - - +
148A ASN* 3.1 5.2 + - - +
150A ARG* 1.3 105.0 - - - +
152A LEU* 1.3 65.7 + - - +
153A ARG 3.1 0.2 - - - -
154A ASP* 4.0 8.2 - - + +
155A TRP* 3.0 26.5 + - - +
148B ASN* 3.7 39.5 - - - +
151B LEU* 3.7 26.3 - - + +
152B LEU* 4.2 22.2 - - + +
155B TRP* 5.0 9.3 - - + +
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Residues in contact with LEU 152 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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148A ASN* 2.9 18.0 + - - +
149A GLU* 3.7 15.0 - - + +
150A ARG 3.4 0.2 - - - -
151A LEU* 1.3 77.2 - - - +
153A ARG* 1.3 60.5 + - + +
155A TRP* 3.8 7.8 - - + +
156A ASN* 2.7 44.9 + - - +
150B ARG* 6.1 1.3 - - - +
151B LEU* 4.1 17.2 - - + +
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Residues in contact with ARG 153 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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146A LYS 5.3 0.6 + - - -
149A GLU* 3.3 34.6 + - - +
150A ARG* 3.7 20.6 - - - +
151A LEU 3.1 0.4 - - - -
152A LEU* 1.3 79.1 - - + +
154A ASP* 1.3 56.7 + - - +
155A TRP 2.9 5.9 + - - -
156A ASN* 2.9 10.8 + - - +
157A ASP* 2.8 36.0 + - - +
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Residues in contact with ASP 154 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
150A ARG* 2.9 54.1 + - - +
151A LEU* 3.4 10.0 + - + +
153A ARG* 1.3 74.7 - - - +
155A TRP* 1.3 58.4 + - - +
157A ASP* 4.0 8.0 - - - +
158A VAL* 3.5 15.8 + - - +
155B TRP* 2.8 36.5 + - + +
----------------------------------------------------------
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Residues in contact with TRP 155 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
151A LEU 3.0 16.8 + - - +
152A LEU* 3.8 8.5 - - + +
153A ARG 3.0 1.0 - - - -
154A ASP* 1.3 75.4 - - - +
156A ASN* 1.3 75.9 + - - +
157A ASP 3.1 1.7 + - - -
158A VAL* 3.2 2.6 + - + +
159A GLN* 2.7 59.5 + - + +
151B LEU* 5.0 7.6 - - + +
154B ASP* 3.4 34.7 + - + +
155B TRP* 3.7 22.9 - + + -
158B VAL* 3.3 32.7 - - + +
161B ARG* 5.8 0.9 - - - -
----------------------------------------------------------
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Residues in contact with ASN 156 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
152A LEU* 2.7 38.3 + - - +
153A ARG* 2.9 10.7 + - - +
155A TRP* 1.3 97.3 - - - +
157A ASP* 1.3 61.5 + - - +
159A GLN* 3.6 4.5 - - - +
160A GLY* 3.1 18.9 + - - -
----------------------------------------------------------
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Residues in contact with ASP 157 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
153A ARG 2.8 16.2 + - - +
154A ASP* 4.0 9.9 - - - +
156A ASN* 1.3 74.8 - - - +
158A VAL* 1.3 62.1 + - + +
160A GLY* 3.3 3.1 + - - -
161A ARG* 3.0 42.1 + - - +
164A LYS* 5.4 0.2 + - - -
----------------------------------------------------------
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Residues in contact with VAL 158 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
154A ASP 3.5 14.9 + - - +
155A TRP* 3.2 3.6 + - + +
157A ASP* 1.3 79.0 - - + +
159A GLN* 1.3 59.6 + - - +
161A ARG* 3.1 19.3 + - - +
162A PHE* 2.7 27.9 + - - +
155B TRP* 4.1 17.7 - - + +
158B VAL* 3.3 25.1 - - + +
159B GLN* 3.6 35.9 - - + +
162B PHE* 4.6 7.4 - - + -
----------------------------------------------------------
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Residues in contact with GLN 159 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
155A TRP* 2.7 48.6 + - + +
156A ASN* 3.6 11.2 - - - +
157A ASP 3.2 0.2 - - - -
158A VAL* 1.3 73.7 - - - +
160A GLY* 1.3 62.8 + - - +
162A PHE* 3.1 18.6 + - - +
163A GLU* 3.0 48.2 + - - +
158B VAL* 3.4 29.3 - - + +
161B ARG* 4.7 2.3 + - - -
----------------------------------------------------------
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Residues in contact with GLY 160 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
156A ASN 3.1 11.3 + - - -
157A ASP 3.8 2.9 - - - -
158A VAL 3.2 0.2 - - - -
159A GLN* 1.3 77.1 - - - +
161A ARG* 1.3 65.7 + - - +
162A PHE 2.9 1.0 + - - -
163A GLU* 3.0 15.6 + - - +
164A LYS* 2.9 45.8 + - - +
----------------------------------------------------------
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Residues in contact with ARG 161 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
157A ASP* 3.0 31.5 + - - +
158A VAL* 3.3 24.5 - - - +
160A GLY* 1.3 74.3 - - - +
162A PHE* 1.3 59.4 + - - +
164A LYS* 3.6 14.7 + - + +
165A ALA* 3.2 15.1 + - - +
162B PHE* 3.2 51.3 - - + -
----------------------------------------------------------
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Residues in contact with PHE 162 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
158A VAL 2.7 12.8 + - - +
159A GLN* 3.1 31.2 - - - +
160A GLY 2.9 0.2 - - - -
161A ARG* 1.3 73.9 - - - +
163A GLU* 1.3 72.5 + - + +
164A LYS 3.0 1.3 - - - -
165A ALA* 2.9 15.6 + - - +
166A VAL* 3.0 29.4 + - + +
158B VAL* 4.3 6.7 - - + -
161B ARG* 3.2 49.8 - - + -
162B PHE* 3.6 28.9 - - + -
165B ALA* 4.0 13.0 - - + -
----------------------------------------------------------
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Residues in contact with GLU 163 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
159A GLN* 3.0 35.9 + - - +
160A GLY* 3.0 17.8 + - - +
162A PHE* 1.3 86.4 - - + +
164A LYS* 1.3 55.6 + - + +
166A VAL* 3.4 6.4 + - - +
167A SER* 2.8 40.1 + - - +
----------------------------------------------------------
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Residues in contact with LYS 164 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
160A GLY* 2.9 39.5 + - - +
161A ARG* 3.7 11.4 - - + +
163A GLU* 1.3 77.9 + - + +
165A ALA* 1.3 59.0 + - - +
167A SER* 3.5 5.5 + - - -
168A ALA* 2.9 31.2 + - - +
----------------------------------------------------------
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Residues in contact with ALA 165 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
161A ARG 3.2 11.2 + - - +
162A PHE 2.9 8.8 + - - +
164A LYS* 1.3 77.7 - - - +
166A VAL* 1.3 62.7 + - - +
168A ALA* 3.4 7.0 + - - +
169A LYS* 3.1 22.0 + - - +
162B PHE* 4.4 3.6 - - + -
165B ALA* 4.3 15.7 - - + +
166B VAL* 3.8 31.2 - - + +
169B LYS* 4.5 8.8 - - + +
----------------------------------------------------------
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Residues in contact with VAL 166 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
162A PHE* 3.0 45.0 + - + +
163A GLU* 3.7 9.4 - - - +
165A ALA* 1.3 74.9 - - - +
167A SER* 1.3 67.7 + - - +
169A LYS* 3.1 23.4 + - - +
170A GLU* 3.2 33.0 + - + +
165B ALA* 4.3 10.3 - - + -
----------------------------------------------------------
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Residues in contact with SER 167 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
163A GLU* 2.8 26.8 + - - +
164A LYS* 3.9 6.1 - - - -
166A VAL* 1.3 78.4 - - - +
168A ALA* 1.3 62.2 + - - +
170A GLU* 3.4 11.9 + - - +
171A ALA* 3.1 24.0 + - - +
----------------------------------------------------------
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Residues in contact with ALA 168 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
164A LYS 2.9 19.1 + - - +
165A ALA* 3.6 6.5 - - - +
166A VAL 3.2 0.2 - - - -
167A SER* 1.3 76.6 - - - +
169A LYS* 1.3 62.3 + - - +
171A ALA* 3.6 6.2 + - - +
172A LEU* 3.2 23.4 + - - +
169B LYS* 3.7 29.7 - - + +
----------------------------------------------------------
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Residues in contact with LYS 169 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
165A ALA 3.1 13.4 + - - +
166A VAL* 3.1 19.0 + - - +
168A ALA* 1.3 75.6 - - - +
170A GLU* 1.3 59.6 + - + +
172A LEU* 3.1 5.1 + - - +
173A GLU* 2.8 46.4 + - + +
165B ALA* 4.7 6.5 - - - +
168B ALA* 4.2 18.5 - - + +
169B LYS* 4.1 35.2 - - + +
172B LEU* 3.8 20.8 - - + +
----------------------------------------------------------
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Residues in contact with GLU 170 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
166A VAL* 3.2 29.3 + - + +
167A SER* 3.4 11.7 + - - +
169A LYS* 1.3 81.1 - - + +
171A ALA* 1.3 62.5 + - - +
173A GLU* 3.6 11.1 - - - +
174A THR* 3.1 34.6 + - + +
----------------------------------------------------------
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Residues in contact with ALA 171 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
167A SER 3.1 16.8 + - - +
168A ALA* 3.9 7.2 - - - +
170A GLU* 1.3 76.5 - - - +
172A LEU* 1.3 59.2 + - - +
174A THR* 3.2 7.2 + - - -
175A ASP* 3.1 29.1 + - - +
----------------------------------------------------------
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Residues in contact with LEU 172 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
168A ALA 3.2 17.8 + - - +
169A LYS 3.1 3.7 + - - +
171A ALA* 1.3 75.4 - - - +
173A GLU* 1.3 60.2 + - - +
175A ASP* 3.5 8.3 - - + +
176A LEU* 3.0 48.3 + - + +
169B LYS* 3.8 34.8 - - + +
172B LEU* 4.1 13.9 - - + -
173B GLU* 3.8 35.7 - - + +
----------------------------------------------------------
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Residues in contact with GLU 173 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
169A LYS* 2.8 28.2 + - - +
170A GLU* 3.6 11.9 - - - +
172A LEU* 1.3 74.0 - - - +
174A THR* 1.3 68.6 + - + +
176A LEU* 3.1 3.8 + - - +
177A TYR* 3.0 44.8 + - + -
172B LEU* 3.7 27.7 - - + +
176B LEU* 4.0 10.6 - - + +
775C LYS* 2.9 29.5 + - - +
----------------------------------------------------------
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Residues in contact with THR 174 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
170A GLU* 3.1 16.8 + - + +
171A ALA* 3.2 12.6 + - - -
173A GLU* 1.3 80.0 - - + +
175A ASP* 1.3 61.3 + - - +
177A TYR* 3.8 7.5 - - - +
178A LYS* 2.9 36.9 + - - +
771C LEU* 4.4 18.5 - - + +
775C LYS* 5.7 7.6 - - - +
----------------------------------------------------------
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Residues in contact with ASP 175 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
171A ALA 3.1 17.1 + - - +
172A LEU* 3.5 13.5 - - + +
173A GLU 3.1 0.2 - - - -
174A THR* 1.3 84.9 + - - +
176A LEU* 1.3 63.3 + - + +
178A LYS* 3.6 19.9 + - - +
179A ARG* 3.4 50.2 + - - +
----------------------------------------------------------
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Residues in contact with LEU 176 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
172A LEU* 3.0 36.9 + - + +
173A GLU 3.6 4.5 - - - +
175A ASP* 1.3 75.7 - - + +
177A TYR* 1.3 66.5 + - - +
179A ARG* 2.9 29.8 + - - +
180A PHE* 3.0 36.8 + - + -
172B LEU* 4.5 1.8 - - + -
173B GLU* 3.7 40.8 - - + +
176B LEU* 3.7 26.7 - - + -
177B TYR* 6.5 0.4 - - + -
----------------------------------------------------------
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Residues in contact with TYR 177 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
173A GLU* 3.0 41.7 + - + +
174A THR* 3.8 4.7 - - - +
176A LEU* 1.3 76.1 - - - +
178A LYS* 1.3 58.1 + - - +
180A PHE* 3.0 7.8 + + - +
181A ILE* 2.8 36.9 + - + +
176B LEU* 3.7 24.5 - - + +
771C LEU* 3.9 19.3 - - + -
774C LEU* 3.7 23.3 - - + -
775C LYS* 3.6 49.1 + - + +
778C PHE* 3.0 49.1 - + - +
----------------------------------------------------------
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Residues in contact with LYS 178 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
174A THR* 2.9 23.7 + - - +
175A ASP* 3.6 19.2 + - - +
176A LEU 3.1 0.2 + - - -
177A TYR* 1.3 77.8 - - - +
179A ARG* 1.3 64.1 + - + +
181A ILE* 3.6 12.5 + - - +
182A LEU* 3.4 30.2 + - + +
771C LEU* 4.7 4.0 - - + +
----------------------------------------------------------
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Residues in contact with ARG 179 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
175A ASP* 3.4 43.8 + - - +
176A LEU* 2.9 22.3 + - - +
178A LYS* 1.3 75.9 - - + +
180A PHE* 1.3 70.9 + - + +
182A LEU* 3.4 12.4 + - + +
183A VAL* 3.3 25.6 + - + +
----------------------------------------------------------
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Residues in contact with PHE 180 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
176A LEU* 3.0 33.5 + - + -
177A TYR* 3.0 14.1 + + - +
179A ARG* 1.3 78.8 - - + +
181A ILE* 1.3 67.1 + - - +
183A VAL* 3.1 3.1 + - - +
184A LEU* 2.8 30.1 + - + +
173B GLU 5.6 0.2 - - - -
176B LEU* 3.7 34.3 - - + -
177B TYR* 4.0 25.1 - + + -
180B PHE* 3.5 49.4 - + + -
774C LEU* 3.9 11.7 - - + -
778C PHE* 3.9 18.4 - + - -
----------------------------------------------------------
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Residues in contact with ILE 181 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
177A TYR* 2.8 30.3 + - + +
178A LYS* 3.7 9.4 - - - +
179A ARG 3.4 0.2 - - - -
180A PHE* 1.3 71.0 - - - +
182A LEU* 1.3 63.4 + - + +
184A LEU* 4.0 4.7 - - - +
185A ASN* 2.9 56.4 + - - +
769C THR* 3.7 14.8 - - + +
770C ASP* 3.7 9.9 - - + +
771C LEU* 3.3 42.2 - - + +
774C LEU* 4.3 12.5 - - + +
----------------------------------------------------------
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Residues in contact with LEU 182 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
178A LYS* 3.4 20.7 + - + +
179A ARG* 3.6 12.6 - - + +
180A PHE 3.2 0.6 - - - -
181A ILE* 1.3 84.9 - - + +
183A VAL* 1.3 63.7 + - + +
185A ASN* 3.4 4.6 + - + +
186A GLU* 3.0 36.1 + - + +
----------------------------------------------------------
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Residues in contact with VAL 183 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
179A ARG* 3.3 10.7 + - + +
180A PHE 3.1 6.3 + - - +
182A LEU* 1.3 76.3 - - + +
184A LEU* 1.3 65.0 + - - +
186A GLU* 3.2 25.3 + - - +
187A LYS* 3.3 21.5 + - - +
180B PHE* 3.7 27.1 - - + -
184B LEU* 3.9 17.5 - - + -
----------------------------------------------------------
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Residues in contact with LEU 184 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
180A PHE 2.8 20.4 + - - +
181A ILE 4.0 2.7 - - - +
183A VAL* 1.3 73.0 - - - +
185A ASN* 1.3 63.2 + - - +
187A LYS* 3.1 9.2 + - - +
188A LYS* 3.1 34.8 + - - +
180B PHE* 4.0 17.9 - - + -
183B VAL* 3.8 18.6 - - + -
184B LEU* 3.8 37.9 - - + +
187B LYS* 4.2 9.2 - - + +
763C ASP* 4.6 3.4 - - - +
769C THR* 4.7 7.6 - - + -
774C LEU* 3.8 39.3 - - + -
778C PHE* 5.6 0.7 - - + -
----------------------------------------------------------
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Residues in contact with ASN 185 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
181A ILE* 2.9 42.0 + - - +
182A LEU* 4.0 4.8 - - - +
184A LEU* 1.3 73.0 - - - +
186A GLU* 1.3 65.9 + - - +
188A LYS* 3.3 11.1 + - - +
189A THR* 3.1 22.7 + - - -
768C ASP* 3.2 31.7 + - - +
769C THR* 2.8 40.4 + - - +
----------------------------------------------------------
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Residues in contact with GLU 186 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
182A LEU* 3.0 32.7 + - + +
183A VAL* 3.6 22.0 - - - +
184A LEU 3.2 0.4 - - - -
185A ASN* 1.3 76.8 - - - +
187A LYS* 1.3 66.4 + - + +
189A THR* 3.1 23.9 + - - +
190A LYS* 3.3 7.3 + - - +
----------------------------------------------------------
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Residues in contact with LYS 187 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
183A VAL* 3.5 19.3 - - - +
184A LEU* 3.1 7.1 + - - +
186A GLU* 1.3 77.9 - - + +
188A LYS* 1.3 65.1 + - - +
190A LYS* 2.9 18.7 + - + +
191A ILE* 2.9 17.9 + - - +
184B LEU* 4.1 27.6 - - + -
187B LYS* 3.9 21.8 - - + -
188B LYS* 4.7 17.6 - - + +
191B ILE* 3.9 20.2 - - + +
----------------------------------------------------------
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Residues in contact with LYS 188 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
184A LEU* 3.1 18.1 + - - +
185A ASN* 3.3 30.7 - - - +
186A GLU 3.3 0.2 - - - -
187A LYS* 1.3 76.6 - - - +
189A THR* 1.3 58.2 + - - +
191A ILE* 3.8 2.7 - - - +
192A ARG* 3.0 46.7 + - - +
187B LYS* 4.3 8.7 - - + -
763C ASP* 2.6 36.9 + - - -
764C SER 2.6 23.4 + - - +
765C TYR 3.8 21.7 - - - +
766C PHE 4.2 2.2 - - - +
767C ILE 3.2 23.0 + - - +
768C ASP* 4.0 2.7 - - - +
769C THR* 4.1 10.4 - - - +
----------------------------------------------------------
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Residues in contact with THR 189 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
185A ASN 3.1 12.0 + - - -
186A GLU* 3.1 17.3 + - - -
187A LYS 3.0 0.2 - - - -
188A LYS* 1.3 79.2 - - - +
190A LYS* 1.3 61.4 + - + +
192A ARG* 3.2 27.2 + - - +
193A SER* 3.1 24.1 + - - -
768C ASP* 5.1 0.3 + - - -
----------------------------------------------------------
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Residues in contact with LYS 190 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
186A GLU 3.3 5.4 + - - +
187A LYS* 2.9 14.5 + - + +
189A THR* 1.3 81.0 - - + +
191A ILE* 1.3 57.2 + - - +
193A SER* 3.1 9.5 + - - +
194A LEU* 2.8 51.7 + - + +
191B ILE* 4.0 21.1 - - + +
195B HIS* 3.9 25.0 - - - -
----------------------------------------------------------
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Residues in contact with ILE 191 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
187A LYS 2.9 18.1 + - - +
188A LYS 3.8 0.9 - - - +
190A LYS* 1.3 75.7 - - - +
192A ARG* 1.3 57.7 + - - +
194A LEU* 4.7 0.4 - - - -
195A HIS* 2.8 32.9 + - - +
187B LYS* 3.6 42.0 - - + +
190B LYS* 4.1 17.5 - - + -
191B ILE* 3.4 25.4 - - + +
194B LEU* 3.6 17.4 - - + +
765C TYR* 3.4 31.4 - - + +
766C PHE* 3.8 17.7 - - + -
----------------------------------------------------------
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Residues in contact with ARG 192 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
188A LYS* 3.0 23.2 + - - +
189A THR* 3.2 33.4 + - - +
191A ILE* 1.3 76.7 - - - +
193A SER* 1.3 62.7 + - - +
195A HIS* 3.4 5.9 + - - +
196A ASN* 3.0 37.9 + - - +
766C PHE* 2.8 56.6 + - + +
767C ILE* 4.6 5.3 - - - +
768C ASP* 3.6 25.3 + - - +
----------------------------------------------------------
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Residues in contact with SER 193 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
189A THR* 3.1 15.9 + - - -
190A LYS* 3.3 15.1 - - - +
192A ARG* 1.3 79.4 - - - +
194A LEU* 1.3 65.6 + - - +
196A ASN* 3.4 4.7 + - - +
197A LYS* 3.1 47.0 + - - +
----------------------------------------------------------
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Residues in contact with LEU 194 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
190A LYS* 2.8 34.9 + - + +
193A SER* 1.3 72.8 - - - +
195A HIS* 1.3 67.4 + - - +
197A LYS* 3.1 8.7 + - + +
198A LEU* 3.0 23.3 + - - +
191B ILE* 3.7 38.1 - - + +
194B LEU* 3.8 25.3 - - + +
195B HIS* 3.8 29.6 - - + +
198B LEU* 3.8 24.2 - - + +
----------------------------------------------------------
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Residues in contact with HIS 195 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
191A ILE 2.8 18.4 + - - +
192A ARG* 3.5 4.5 - - - +
194A LEU* 1.3 76.6 - - - +
196A ASN* 1.3 79.3 + - - +
198A LEU* 3.1 19.9 + - - +
199A LEU* 3.1 35.4 + - + +
190B LYS* 5.6 0.8 + - - -
194B LEU* 3.8 15.5 - - + +
755C ALA* 4.6 17.0 - - + +
766C PHE* 3.6 37.0 - + + -
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Residues in contact with ASN 196 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
192A ARG* 3.0 25.6 + - - +
193A SER* 3.9 4.9 - - - +
195A HIS* 1.3 90.6 - - - +
197A LYS* 1.3 68.0 + - + +
199A LEU* 3.4 14.9 + - - +
200A ASN* 3.1 22.7 + - - +
----------------------------------------------------------
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Residues in contact with LYS 197 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
193A SER* 3.1 42.2 + - - +
194A LEU* 3.1 10.9 + - + +
196A ASN* 1.3 79.5 - - - +
198A LEU* 1.3 57.7 + - - +
200A ASN* 3.4 16.5 + - + +
201A ALA* 3.0 26.7 + - - +
198B LEU* 3.9 19.9 - - + +
----------------------------------------------------------
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Residues in contact with LEU 198 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
194A LEU 3.0 11.3 + - - +
195A HIS* 3.3 12.8 - - - +
197A LYS* 1.3 76.4 - - - +
199A LEU* 1.3 64.4 + - + +
201A ALA* 3.2 8.2 + - + +
202A ALA* 2.9 21.6 + - + +
194B LEU* 4.5 13.0 - - + -
197B LYS* 3.7 54.1 - - + +
198B LEU* 3.7 22.4 - - + +
201B ALA* 5.8 3.4 - - + -
----------------------------------------------------------
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Residues in contact with LEU 199 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
195A HIS* 3.1 44.5 + - + +
196A ASN* 3.8 16.2 - - - +
197A LYS 3.3 0.2 - - - -
198A LEU* 1.3 73.1 - - + +
200A ASN* 1.3 68.3 + - - +
202A ALA* 2.8 21.4 + - + +
203A GLN* 2.9 30.5 + - + +
----------------------------------------------------------
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Residues in contact with ASN 200 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
196A ASN 3.1 10.5 + - - +
197A LYS* 3.4 21.9 + - + +
199A LEU* 1.3 80.2 - - - +
201A ALA* 1.3 61.3 + - - +
203A GLN* 3.2 16.9 + - - +
204A GLU* 3.0 35.2 + - - +
----------------------------------------------------------
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Residues in contact with ALA 201 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
197A LYS 3.0 14.7 + - - +
198A LEU* 3.5 14.4 - - + +
200A ASN* 1.3 81.9 - - - +
202A ALA* 1.3 60.2 + - - +
204A GLU* 3.4 8.7 + - - +
205A ARG* 3.2 28.1 + - - +
198B LEU* 4.9 7.4 - - + -
201B ALA* 4.8 17.7 - - + -
----------------------------------------------------------
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Residues in contact with ALA 202 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
198A LEU* 2.9 12.7 + - + +
199A LEU* 2.8 19.6 + - + +
201A ALA* 1.3 75.8 - - - +
203A GLN* 1.3 66.7 + - + +
205A ARG* 3.3 10.5 + - - +
206A GLU* 3.1 27.3 + - + +
----------------------------------------------------------
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Residues in contact with GLN 203 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
199A LEU* 2.9 38.2 + - + +
200A ASN* 3.2 14.1 - - - +
202A ALA* 1.3 75.4 - - + +
204A GLU* 1.3 67.0 + - - +
206A GLU* 3.4 8.9 + - - +
207A LYS* 3.1 38.2 + - - +
----------------------------------------------------------
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Residues in contact with GLU 204 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
200A ASN* 3.0 21.2 + - - +
201A ALA* 3.4 13.7 - - - +
203A GLN* 1.3 75.3 - - - +
205A ARG* 1.3 65.6 + - + +
207A LYS* 3.2 27.8 + - - +
208A ASP* 3.2 32.8 + - - +
----------------------------------------------------------
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Residues in contact with ARG 205 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
201A ALA 3.2 14.0 + - - +
202A ALA* 3.3 10.7 + - - +
204A GLU* 1.3 80.9 - - - +
206A GLU* 1.3 62.9 + - + +
208A ASP* 3.2 13.1 + - - +
209A ILE* 3.2 49.8 + - + +
201B ALA* 4.9 17.3 - - + -
----------------------------------------------------------
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Residues in contact with GLU 206 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
202A ALA 3.1 19.2 + - - +
203A GLN* 3.7 9.4 - - - +
204A GLU 3.2 0.2 - - - -
205A ARG* 1.3 79.7 + - - +
207A LYS* 1.3 62.0 + - + +
209A ILE* 3.4 22.8 + - - +
210A LYS* 3.0 52.9 + - + +
----------------------------------------------------------
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Residues in contact with LYS 207 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
203A GLN* 3.1 28.2 + - - +
204A GLU* 3.2 26.3 + - - +
206A GLU* 1.3 77.4 - - + +
208A ASP* 1.3 62.0 + - - +
210A LYS* 3.4 4.8 + - - -
211A GLN* 3.0 44.4 + - - +
----------------------------------------------------------
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Residues in contact with ASP 208 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
204A GLU* 3.2 24.3 + - - +
205A ARG* 3.2 14.3 + - - +
207A LYS* 1.3 80.0 - - - +
209A ILE* 1.3 61.0 + - + +
211A GLN* 4.0 14.9 + - - +
----------------------------------------------------------
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Residues in contact with ILE 209 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
205A ARG* 3.2 38.7 + - - +
206A GLU* 3.7 28.3 - - - +
207A LYS 3.2 0.2 - - - -
208A ASP* 1.3 81.0 - - + +
210A LYS* 1.3 70.5 + - + +
211A GLN 3.7 0.5 + - - -
----------------------------------------------------------
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Residues in contact with LYS 210 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
206A GLU* 3.0 36.7 + - + +
207A LYS* 3.4 6.7 + - - +
209A ILE* 1.3 87.5 - - + +
211A GLN* 1.3 61.8 + - + +
----------------------------------------------------------
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Residues in contact with GLN 211 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
207A LYS* 3.0 30.9 + - - +
208A ASP* 4.3 11.9 - - - +
209A ILE 3.4 2.5 - - - -
210A LYS* 1.3 84.4 - - - +
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il