Contacts of the helix formed by residues 552 - 640 (chain B) in PDB entry 1X79
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with GLU 552 (chain B).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
274A ASP* 3.7 18.2 - - - +
278A ALA* 5.1 8.0 - - - +
553B THR* 1.3 58.8 + - - +
554B ARG* 3.2 16.1 - - - +
555B ASP* 3.1 15.4 + - - +
556B GLN* 2.8 53.5 + - - +
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Residues in contact with THR 553 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
274A ASP* 5.4 1.7 + - - -
552B GLU* 1.3 79.3 + - - +
554B ARG* 1.3 63.4 + - + +
556B GLN* 2.8 13.2 + - + +
557B VAL* 2.6 46.2 + - + +
553C THR* 3.5 36.8 + - - +
554C ARG* 4.8 10.0 + - - -
556C GLN* 5.1 2.7 - - - +
557C VAL* 4.7 4.2 - - + +
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Residues in contact with ARG 554 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
552B GLU 3.2 10.7 - - - +
553B THR* 1.3 81.7 - - + +
555B ASP* 1.3 62.4 + - - +
557B VAL* 3.9 5.1 - - - +
558B LYS* 3.0 27.4 + - - +
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Residues in contact with ASP 555 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
552B GLU* 3.1 14.8 + - - +
553B THR 3.0 0.6 - - - -
554B ARG* 1.3 81.0 - - - +
556B GLN* 1.3 66.5 + - - +
558B LYS* 4.2 19.7 + - - +
559B LYS* 3.1 54.2 + - - +
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Residues in contact with GLN 556 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
274A ASP* 3.6 34.5 + - - +
277A LEU* 4.0 23.1 - - + +
278A ALA* 4.6 8.4 - - - +
281A LEU* 3.9 18.6 - - + +
552B GLU* 2.8 31.9 + - - +
553B THR* 3.0 20.9 - - - +
555B ASP* 1.3 78.8 - - - +
557B VAL* 1.3 64.2 + - - +
559B LYS* 3.2 4.5 + - - +
560B LEU* 3.1 27.7 + - + +
554C ARG* 5.8 3.1 - - - +
557C VAL* 4.0 15.7 - - + -
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Residues in contact with VAL 557 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
553B THR* 2.6 29.5 + - + +
554B ARG* 3.9 4.9 - - - +
556B GLN* 1.3 74.4 - - - +
558B LYS* 1.3 63.5 + - - +
559B LYS 3.1 0.3 + - - -
560B LEU* 3.3 2.2 + - - +
561B GLN* 2.8 48.6 + - - +
556C GLN* 3.6 44.9 - - + +
557C VAL* 3.7 17.0 - - + +
560C LEU* 4.0 14.4 - - + -
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Residues in contact with LYS 558 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
554B ARG 3.0 20.7 + - - +
555B ASP* 3.9 22.5 + - - +
556B GLN 3.3 0.4 - - - -
557B VAL* 1.3 75.1 - - - +
559B LYS* 1.3 64.1 + - - +
561B GLN* 3.2 17.2 + - - +
562B LEU* 3.0 25.3 + - - +
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Residues in contact with LYS 559 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
281A LEU* 4.0 37.5 - - + -
282A GLN* 5.2 2.2 + - - +
284A ASN* 5.1 1.6 + - - +
285A ASP* 2.7 37.8 + - - +
555B ASP* 3.1 47.7 + - - +
556B GLN* 3.9 4.7 - - - +
558B LYS* 1.3 82.0 - - + +
560B LEU* 1.3 60.8 + - - +
562B LEU* 3.1 11.3 + - + +
563B MET* 2.9 30.5 + - - +
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Residues in contact with LEU 560 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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267A ALA* 4.4 15.7 - - + -
277A LEU* 4.5 10.1 - - + -
281A LEU* 4.1 22.0 - - + +
556B GLN 3.1 15.3 + - - +
557B VAL 3.6 7.4 - - - +
559B LYS* 1.3 72.6 - - - +
561B GLN* 1.3 67.1 + - - +
563B MET* 3.0 6.6 + - - +
564B LEU* 2.9 22.2 + - - +
557C VAL* 3.8 47.8 - - + +
560C LEU* 3.7 20.0 - - + -
561C GLN* 4.0 12.3 - - + -
564C LEU* 4.5 17.6 - - + +
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Residues in contact with GLN 561 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
557B VAL* 2.8 36.0 + - - +
558B LYS* 3.2 21.8 + - + +
560B LEU* 1.3 72.3 - - - +
562B LEU* 1.3 62.5 + - - +
564B LEU* 3.2 9.1 + - - +
565B ARG* 3.1 21.5 + - - +
556C GLN* 5.4 2.6 + - - -
560C LEU* 3.8 23.4 - - + +
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Residues in contact with LEU 562 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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284A ASN* 4.2 10.1 - - - +
285A ASP* 5.2 7.9 - - - +
288A THR* 4.4 8.3 - - + +
558B LYS 3.0 13.1 + - - +
559B LYS* 3.3 13.9 - - + +
560B LEU 3.0 0.2 - - - -
561B GLN* 1.3 75.8 - - - +
563B MET* 1.3 65.4 + - - +
565B ARG* 3.2 12.5 + - + -
566B GLN* 3.0 53.2 + - + +
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Residues in contact with MET 563 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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263A LEU* 3.9 26.5 - - + +
264A PHE* 3.8 20.8 - - + -
267A ALA* 3.8 22.2 - - + -
280A ILE* 4.3 4.0 - - + -
281A LEU* 3.9 20.2 - - + -
284A ASN* 3.4 47.6 - - + +
559B LYS 2.9 13.0 + - - +
560B LEU* 3.5 8.5 - - - +
562B LEU* 1.3 77.8 - - - +
564B LEU* 1.3 52.3 + - - +
566B GLN* 2.9 10.9 + - - +
567B ALA* 2.7 34.7 + - - +
564C LEU* 4.0 15.7 - - + -
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Residues in contact with LEU 564 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
560B LEU 2.9 12.2 + - - +
561B GLN* 3.5 10.1 - - - +
562B LEU 3.2 0.2 - - - -
563B MET* 1.3 76.5 - - - +
565B ARG* 1.3 63.1 + - - +
567B ALA* 3.2 2.6 + - - +
568B ASN* 2.9 22.3 + - - +
560C LEU* 4.2 17.3 - - + +
563C MET* 3.9 35.2 - - + +
564C LEU* 3.8 41.3 - - + +
567C ALA* 4.6 7.6 - - + +
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Residues in contact with ARG 565 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
561B GLN 3.1 13.6 + - - +
562B LEU* 3.7 15.9 - - + +
563B MET 3.2 0.2 - - - -
564B LEU* 1.3 75.5 - - - +
566B GLN* 1.3 59.6 + - + +
568B ASN* 3.2 18.7 + - - +
569B ASP* 2.8 53.7 + - - +
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Residues in contact with GLN 566 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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260A ARG* 2.8 39.3 + - - +
264A PHE* 3.8 13.8 - - + -
284A ASN* 3.1 24.9 + - - +
288A THR* 3.2 21.8 + - - +
562B LEU* 3.0 33.0 + - + +
563B MET* 2.9 13.5 + - - +
565B ARG* 1.3 75.0 - - + +
567B ALA* 1.3 65.9 + - - +
569B ASP* 3.3 6.9 + - - +
570B GLN* 2.9 24.8 + - - +
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Residues in contact with ALA 567 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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264A PHE* 3.6 28.6 - - + -
563B MET 2.7 14.8 + - - +
564B LEU 3.6 6.3 - - - +
566B GLN* 1.3 72.9 - - - +
568B ASN* 1.3 53.9 + - - +
570B GLN* 3.2 1.9 + - - +
571B LEU* 2.7 38.1 + - - +
564C LEU* 4.3 7.2 - - + -
567C ALA* 3.9 28.0 - - + -
571C LEU* 4.4 6.9 - - + +
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Residues in contact with ASN 568 (chain B).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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564B LEU 2.9 12.9 + - - +
565B ARG* 3.3 27.7 - - - +
567B ALA* 1.3 77.4 - - - +
569B ASP* 1.3 85.5 + - - +
571B LEU* 3.3 8.7 + - - +
572B GLU* 3.0 32.5 + - - +
567C ALA* 5.5 1.2 - - - +
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Residues in contact with ASP 569 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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565B ARG* 2.8 44.9 + - - +
566B GLN* 3.9 6.1 - - - +
568B ASN* 1.3 92.2 + - - +
570B GLN* 1.3 57.9 + - - +
572B GLU* 3.2 13.1 + - - +
573B LYS* 3.0 27.4 + - - +
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Residues in contact with GLN 570 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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257A GLU* 4.0 21.9 + - - +
258A ARG* 5.2 0.2 - - - +
260A ARG* 3.8 31.0 - - - +
261A PRO* 4.0 5.9 - - - +
264A PHE* 4.3 5.0 - - - -
566B GLN 2.9 15.8 + - - +
567B ALA* 3.8 2.0 - - - +
569B ASP* 1.3 75.0 - - - +
571B LEU* 1.3 66.7 + - - +
572B GLU 3.0 1.6 - - - -
573B LYS* 3.3 16.0 + - - +
574B THR* 2.8 35.6 + - - +
571C LEU* 4.1 12.9 - - + +
575C MET* 3.6 28.1 - - - -
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Residues in contact with LEU 571 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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567B ALA 2.7 22.0 + - - +
568B ASN* 3.7 8.1 - - - +
570B GLN* 1.3 72.6 - - - +
572B GLU* 1.3 57.7 + - - +
574B THR* 3.8 0.4 - - - -
575B MET* 2.9 57.2 + - + +
567C ALA* 5.0 5.2 - - + +
570C GLN* 4.3 20.6 - - + +
571C LEU* 3.9 31.5 - - + +
574C THR* 3.8 22.9 - - + +
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Residues in contact with GLU 572 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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568B ASN* 3.0 24.2 + - - +
569B ASP* 3.4 15.1 - - - +
571B LEU* 1.3 76.0 - - - +
573B LYS* 1.3 65.7 + - - +
575B MET* 3.3 8.7 + - - +
576B LYS* 3.0 23.5 + - + +
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Residues in contact with LYS 573 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
257A GLU* 3.4 27.3 + - - -
569B ASP 3.0 15.7 + - - +
570B GLN* 3.9 14.5 - - - +
572B GLU* 1.3 74.5 - - - +
574B THR* 1.3 75.0 + - - +
576B LYS* 3.1 13.6 + - + +
577B ASP* 2.8 52.5 + - - +
578C LYS* 5.0 4.4 - - - +
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Residues in contact with THR 574 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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570B GLN* 2.8 27.6 + - - +
571B LEU 3.8 3.8 - - - -
573B LYS* 1.3 84.0 + - - +
575B MET* 1.3 56.2 + - - +
577B ASP* 3.7 8.9 - - - +
578B LYS* 2.9 27.5 + - - +
571C LEU* 4.2 5.2 - - - +
574C THR* 3.3 38.8 - - + +
575C MET* 3.9 24.2 - - + +
578C LYS* 4.6 13.9 + - + +
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Residues in contact with MET 575 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
571B LEU* 2.9 53.7 + - + +
572B GLU* 3.8 6.5 - - - +
573B LYS 3.1 0.4 - - - -
574B THR* 1.3 75.4 - - - +
576B LYS* 1.3 64.5 + - - +
578B LYS* 3.4 8.1 + - + +
579B GLN* 3.1 21.8 + - - +
570C GLN* 6.3 0.4 - - - -
574C THR* 3.7 15.9 - - + +
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Residues in contact with LYS 576 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
572B GLU* 3.0 15.2 + - + +
573B LYS* 3.4 15.9 - - + +
575B MET* 1.3 75.8 - - - +
577B ASP* 1.3 69.8 + - - +
579B GLN* 3.0 9.0 + - - +
580B GLU* 3.0 43.4 + - + +
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Residues in contact with ASP 577 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
573B LYS* 2.8 49.6 + - - +
574B THR* 3.7 5.1 - - - +
576B LYS* 1.3 75.3 - - - +
578B LYS* 1.3 66.7 + - - +
579B GLN 3.0 0.3 + - - -
580B GLU* 3.1 14.4 + - - +
581B LEU* 3.0 28.1 + - + +
578C LYS* 3.1 35.0 + - + +
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Residues in contact with LYS 578 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
574B THR 2.9 20.7 + - - +
575B MET* 3.6 8.5 - - + +
577B ASP* 1.3 73.3 - - - +
579B GLN* 1.3 63.3 + - - +
581B LEU* 3.3 9.0 + - - +
582B GLU* 3.0 45.6 + - - +
573C LYS* 5.2 2.2 - - - +
574C THR* 4.6 14.6 + - + +
577C ASP* 3.1 37.5 + - + -
578C LYS* 4.5 15.8 - - + +
581C LEU* 3.8 18.6 - - + -
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Residues in contact with GLN 579 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
575B MET 3.1 9.6 + - - +
576B LYS* 3.0 11.8 + - - +
577B ASP 3.0 1.0 - - - -
578B LYS* 1.3 77.5 - - - +
580B GLU* 1.3 61.8 + - + +
582B GLU* 3.0 24.2 + - - +
583B ASP* 2.7 64.3 + - - +
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Residues in contact with GLU 580 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
576B LYS* 3.0 43.3 + - + +
577B ASP* 3.1 14.7 + - - +
579B GLN* 1.3 77.1 - - + +
581B LEU* 1.3 58.4 + - + +
583B ASP* 3.0 12.5 + - - +
584B PHE* 2.8 31.3 + - - +
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Residues in contact with LEU 581 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
577B ASP* 3.0 18.2 + - + +
578B LYS* 3.5 6.7 - - - +
580B GLU* 1.3 75.5 - - + +
582B GLU* 1.3 58.2 + - - +
584B PHE* 3.1 6.2 + - + +
585B ILE* 2.8 36.5 + - - +
578C LYS* 3.9 25.1 - - + +
581C LEU* 3.9 20.4 - - + -
582C GLU* 3.6 32.8 - - + +
585C ILE* 3.5 25.6 - - + -
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Residues in contact with GLU 582 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
578B LYS* 3.0 37.8 + - - +
579B GLN* 3.0 29.5 + - - +
581B LEU* 1.3 75.5 - - - +
583B ASP* 1.3 61.2 + - - +
585B ILE* 3.9 8.3 - - - +
586B LYS* 3.1 24.1 + - - +
581C LEU* 3.6 21.3 - - + +
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Residues in contact with ASP 583 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
579B GLN* 2.7 48.9 + - - +
580B GLU* 3.3 12.9 - - - +
582B GLU* 1.3 71.6 - - - +
584B PHE* 1.3 60.6 + - - +
586B LYS* 3.1 9.0 + - - +
587B GLN* 2.8 30.6 + - - +
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Residues in contact with PHE 584 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
580B GLU 2.8 19.7 + - - +
581B LEU* 3.8 4.9 - - + +
583B ASP* 1.3 74.1 - - - +
585B ILE* 1.3 66.2 + - - +
587B GLN* 4.0 6.0 - - + +
588B SER* 3.1 27.5 + - - -
394C DTT 2.7 38.6 - - + -
585C ILE* 3.9 28.3 - - + -
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Residues in contact with ILE 585 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
581B LEU 2.8 21.1 + - - +
582B GLU* 3.9 6.1 - - - +
584B PHE* 1.3 79.6 - - - +
586B LYS* 1.3 57.9 + - - +
588B SER* 3.5 1.2 + - - -
589B SER* 2.8 36.2 + - - -
394C DTT 3.9 22.8 - - - +
581C LEU* 4.0 27.4 - - + +
584C PHE* 3.6 31.6 - - + -
585C ILE* 3.7 27.6 - - + -
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Residues in contact with LYS 586 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
582B GLU 3.1 16.4 + - - +
583B ASP* 3.5 7.4 - - - +
585B ILE* 1.3 81.0 - - - +
587B GLN* 1.3 68.3 + - - +
589B SER* 3.5 5.8 - - - -
590B GLU* 3.0 47.0 + - + +
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Residues in contact with GLN 587 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
583B ASP 2.8 20.6 + - - +
584B PHE* 4.0 6.1 - - - +
586B LYS* 1.3 73.5 + - - +
588B SER* 1.3 56.7 + - - +
590B GLU* 2.7 41.9 + - - +
591B ASP* 2.9 42.3 + - - +
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Residues in contact with SER 588 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
584B PHE* 3.1 26.7 + - - -
585B ILE 3.5 2.4 + - - -
587B GLN* 1.3 79.8 - - - +
589B SER* 1.3 64.8 + - - +
591B ASP* 3.6 11.9 - - - +
592B SER* 3.0 26.0 + - - -
394C DTT 2.9 36.1 + - - +
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Residues in contact with SER 589 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
585B ILE* 2.8 26.3 + - - -
586B LYS* 3.5 7.0 - - - -
588B SER* 1.3 75.8 + - - +
590B GLU* 1.3 61.9 + - - +
592B SER* 3.3 5.7 + - - -
593B SER* 3.2 22.9 + - - -
394C DTT 3.7 21.5 - - - -
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Residues in contact with GLU 590 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
586B LYS* 3.0 47.9 + - + +
587B GLN* 2.7 28.6 + - - +
589B SER* 1.3 70.4 - - - +
591B ASP* 1.3 71.4 + - - +
593B SER* 3.4 8.9 - - - -
594B HIS* 3.2 32.7 + - + +
----------------------------------------------------------
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Residues in contact with ASP 591 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
587B GLN* 2.9 42.0 + - - +
588B SER* 3.6 11.8 - - - +
590B GLU* 1.3 73.7 - - - +
592B SER* 1.3 56.0 + - - +
594B HIS* 2.5 38.1 + - - +
595B GLN* 3.2 14.4 + - + -
----------------------------------------------------------
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Residues in contact with SER 592 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
588B SER 3.0 11.7 + - - -
589B SER* 3.3 10.4 + - - -
591B ASP* 1.3 78.4 - - - +
593B SER* 1.3 60.0 + - - +
595B GLN* 3.5 9.6 - - - +
596B ILE* 2.8 46.9 + - - +
394C DTT 5.7 1.9 - - - -
----------------------------------------------------------
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Residues in contact with SER 593 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
589B SER 3.2 10.6 + - - -
590B GLU* 3.4 13.0 - - - -
591B ASP 2.7 3.6 + - - -
592B SER* 1.3 82.2 + - - +
594B HIS* 1.3 66.6 + - - -
596B ILE* 3.4 8.6 + - - +
597B SER* 3.0 30.5 + - - -
----------------------------------------------------------
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Residues in contact with HIS 594 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
590B GLU* 3.5 24.2 + - + +
591B ASP* 2.5 17.2 + - - +
593B SER* 1.3 77.0 + - - +
595B GLN* 1.3 66.0 - - - +
597B SER* 2.8 19.4 + - - -
598B ALA* 3.0 13.1 + - - +
----------------------------------------------------------
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Residues in contact with GLN 595 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
591B ASP* 3.2 9.2 + - + +
592B SER* 3.5 16.4 - - - +
594B HIS* 1.3 77.7 - - - +
596B ILE* 1.3 64.5 + - + +
598B ALA* 3.3 9.5 + - - +
599B LEU* 2.9 38.1 + - + +
----------------------------------------------------------
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Residues in contact with ILE 596 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
592B SER* 2.8 35.5 + - - +
593B SER* 3.7 7.6 - - - +
595B GLN* 1.3 73.5 - - + +
597B SER* 1.3 59.1 + - - +
599B LEU* 3.2 12.1 + - + +
600B VAL* 2.8 42.4 + - + +
----------------------------------------------------------
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Residues in contact with SER 597 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
593B SER* 3.0 15.1 + - - -
594B HIS* 2.8 14.2 + - - -
596B ILE* 1.3 77.3 - - - +
598B ALA* 1.3 62.3 + - - -
600B VAL* 3.2 8.0 + - - +
601B LEU* 2.9 29.7 + - - +
----------------------------------------------------------
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Residues in contact with ALA 598 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
594B HIS 3.0 10.1 + - - +
595B GLN* 3.6 14.4 - - - +
597B SER* 1.3 73.1 - - - +
599B LEU* 1.3 69.2 + - + +
601B LEU* 2.7 25.2 + - - +
602B ARG* 2.9 19.9 + - + +
----------------------------------------------------------
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Residues in contact with LEU 599 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
595B GLN* 2.9 33.7 + - + +
596B ILE* 3.5 14.6 - - + +
598B ALA* 1.3 73.3 - - + +
600B VAL* 1.3 58.7 + - + +
602B ARG* 3.4 10.2 + - + +
603B ALA* 2.8 29.9 + - - +
599C LEU* 6.1 4.5 - - + -
----------------------------------------------------------
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Residues in contact with VAL 600 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
596B ILE* 2.8 37.0 + - + +
597B SER* 3.5 7.6 - - - +
598B ALA 2.9 1.0 + - - -
599B LEU* 1.3 71.7 - - + +
601B LEU* 1.3 65.0 + - + +
603B ALA* 3.3 7.5 + - + +
604B GLN* 3.0 49.2 + - + +
----------------------------------------------------------
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Residues in contact with LEU 601 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
597B SER* 2.9 17.9 + - - +
598B ALA* 2.7 18.4 + - - +
600B VAL* 1.3 73.1 - - + +
602B ARG* 1.3 65.3 + - + +
604B GLN* 3.1 21.0 + - - +
605B ALA* 3.0 21.7 + - - +
----------------------------------------------------------
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Residues in contact with ARG 602 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
598B ALA* 2.9 21.3 + - + +
599B LEU* 3.7 13.2 - - + +
601B LEU* 1.3 76.3 - - + +
603B ALA* 1.3 67.2 + - - +
604B GLN 3.0 0.5 + - - -
605B ALA* 3.0 27.6 + - - +
606B SER* 2.9 27.1 + - - -
----------------------------------------------------------
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Residues in contact with ALA 603 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
599B LEU 2.8 21.4 + - - +
600B VAL* 3.3 10.3 + - + +
602B ARG* 1.3 74.0 - - - +
604B GLN* 1.3 56.6 + - + +
606B SER* 3.2 10.9 + - - -
607B GLU* 3.0 24.1 + - - +
----------------------------------------------------------
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Residues in contact with GLN 604 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
600B VAL* 3.0 36.3 + - + +
601B LEU* 3.6 26.1 - - - +
602B ARG 3.1 0.2 - - - -
603B ALA* 1.3 74.1 - - + +
605B ALA* 1.3 66.9 + - - +
606B SER 2.9 1.6 - - - -
607B GLU* 3.0 23.1 + - - +
608B ILE* 3.1 20.8 + - + +
----------------------------------------------------------
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Residues in contact with ALA 605 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
601B LEU 3.0 12.8 + - - +
602B ARG* 3.5 26.9 - - - +
604B GLN* 1.3 74.9 - - - +
606B SER* 1.3 57.9 + - - +
608B ILE* 3.4 12.2 + - - +
609B LEU* 3.0 27.5 + - - +
----------------------------------------------------------
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Residues in contact with SER 606 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
602B ARG* 2.9 16.3 + - - -
603B ALA* 3.2 13.5 - - - -
604B GLN 2.9 0.6 - - - -
605B ALA* 1.3 75.4 - - - +
607B GLU* 1.3 66.4 + - - +
609B LEU* 3.4 10.0 + - - +
610B LEU* 3.0 32.4 + - - +
----------------------------------------------------------
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Residues in contact with GLU 607 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
603B ALA 3.0 12.2 + - - +
604B GLN* 3.0 15.1 + - - +
606B SER* 1.3 73.9 - - - +
608B ILE* 1.3 60.2 + - + +
610B LEU* 3.2 11.5 + - + +
611B GLU* 2.9 51.5 + - + +
----------------------------------------------------------
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Residues in contact with ILE 608 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
604B GLN* 3.1 18.9 + - + +
605B ALA* 3.5 12.1 - - - +
607B GLU* 1.3 77.6 - - + +
609B LEU* 1.3 65.2 + - - +
611B GLU* 3.0 25.9 + - - +
612B GLU* 3.0 34.2 + - + +
----------------------------------------------------------
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Residues in contact with LEU 609 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
605B ALA 3.0 14.0 + - - +
606B SER* 3.7 10.1 - - - +
608B ILE* 1.3 79.8 - - + +
610B LEU* 1.3 72.2 + - + +
612B GLU* 3.0 20.4 + - + +
613B LEU* 3.0 40.7 + - + +
----------------------------------------------------------
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Residues in contact with LEU 610 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
606B SER* 3.0 20.5 + - - +
607B GLU* 3.2 11.4 + - + +
609B LEU* 1.3 85.0 - - + +
611B GLU* 1.3 62.8 + - + +
613B LEU* 3.0 18.0 + - + +
614B GLN* 2.9 29.3 + - + +
610C LEU* 5.1 18.2 - - + -
----------------------------------------------------------
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Residues in contact with GLU 611 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
607B GLU* 2.9 38.2 + - + +
608B ILE* 3.0 19.2 + - - +
610B LEU* 1.3 77.7 - - + +
612B GLU* 1.3 62.8 + - + +
614B GLN* 3.2 19.6 + - - +
615B GLN* 3.2 28.5 + - - +
----------------------------------------------------------
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Residues in contact with GLU 612 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
608B ILE* 3.0 28.5 + - + +
609B LEU* 3.0 23.4 + - + +
611B GLU* 1.3 79.1 - - + +
613B LEU* 1.3 65.8 + - + +
615B GLN* 3.4 17.3 + - - +
616B GLY* 3.1 18.4 + - - -
----------------------------------------------------------
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Residues in contact with LEU 613 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
609B LEU* 3.0 37.5 + - + +
610B LEU* 3.0 18.6 + - + +
612B GLU* 1.3 81.6 - - + +
614B GLN* 1.3 60.3 + - + +
616B GLY* 3.6 2.8 - - - +
617B LEU* 2.8 31.0 + - - +
----------------------------------------------------------
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Residues in contact with GLN 614 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
391B SO4 2.6 41.8 + - - -
610B LEU* 2.9 17.7 + - + +
611B GLU* 3.2 24.1 + - - +
613B LEU* 1.3 76.0 - - + +
615B GLN* 1.3 62.6 + - - +
617B LEU* 3.9 7.1 - - + +
618B SER* 3.0 28.2 + - - +
----------------------------------------------------------
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Residues in contact with GLN 615 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
611B GLU* 3.2 21.4 + - - +
612B GLU* 3.6 18.6 - - - +
613B LEU 3.1 0.4 - - - -
614B GLN* 1.3 79.1 - - + +
616B GLY* 1.3 64.1 + - - +
618B SER* 3.2 6.7 + - - -
619B GLN* 3.1 21.7 + - - +
622B ARG* 4.4 2.4 + - - -
----------------------------------------------------------
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Residues in contact with GLY 616 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
612B GLU 3.1 11.0 + - - -
613B LEU* 3.3 4.5 + - - -
615B GLN* 1.3 80.3 - - - +
617B LEU* 1.3 61.5 + - - +
619B GLN* 3.1 9.0 + - - +
620B ALA* 2.9 21.2 + - - +
----------------------------------------------------------
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Residues in contact with LEU 617 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
613B LEU 2.8 20.3 + - - +
614B GLN* 4.0 7.0 - - + +
616B GLY* 1.3 70.6 - - - -
618B SER* 1.3 57.5 + - - +
620B ALA* 2.9 14.9 + - + +
621B LYS* 2.9 29.0 + - + +
617C LEU* 4.5 21.5 - - + -
----------------------------------------------------------
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Residues in contact with SER 618 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
614B GLN 3.0 15.4 + - - -
615B GLN* 3.4 12.1 - - - -
616B GLY 3.2 0.2 - - - -
617B LEU* 1.3 78.0 - - - +
619B GLN* 1.3 57.1 + - - +
621B LYS* 3.3 12.0 + - - +
622B ARG* 3.1 44.2 + - - -
----------------------------------------------------------
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Residues in contact with GLN 619 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
615B GLN 3.1 12.2 + - - +
616B GLY* 3.6 9.4 - - - +
618B SER* 1.3 74.4 - - - +
620B ALA* 1.3 61.5 + - - +
622B ARG* 2.6 46.3 + - - +
623B ASP* 2.9 54.5 + - - +
----------------------------------------------------------
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Residues in contact with ALA 620 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
616B GLY 2.9 12.4 + - - +
617B LEU* 2.9 21.8 + - + +
619B GLN* 1.3 79.1 - - - +
621B LYS* 1.3 60.9 + - - +
623B ASP* 3.4 12.8 - - - +
624B VAL* 3.3 24.6 + - - +
----------------------------------------------------------
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Residues in contact with LYS 621 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
617B LEU* 2.9 12.7 + - + +
618B SER* 3.7 12.8 - - - +
619B GLN 3.2 0.4 - - - -
620B ALA* 1.3 75.8 - - - +
622B ARG* 1.3 64.4 + - - +
624B VAL* 3.3 9.2 + - + +
625B GLN* 3.0 51.8 + - + +
----------------------------------------------------------
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Residues in contact with ARG 622 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
615B GLN 4.4 2.2 + - - -
618B SER* 3.1 27.4 + - - -
619B GLN* 2.6 65.5 + - - +
621B LYS* 1.3 73.6 - - - +
623B ASP* 1.3 67.7 + - - +
625B GLN* 2.9 19.1 + - - +
626B GLU* 2.9 30.0 + - + +
----------------------------------------------------------
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Residues in contact with ASP 623 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
619B GLN* 2.9 47.4 + - - +
620B ALA* 3.4 14.9 - - - +
622B ARG* 1.3 72.7 - - - +
624B VAL* 1.3 64.7 + - + +
626B GLU* 3.2 6.8 + - - +
627B GLN* 3.0 23.1 + - - +
----------------------------------------------------------
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Residues in contact with VAL 624 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
620B ALA 3.3 11.9 + - - +
621B LYS* 3.6 12.1 - - + +
622B ARG 3.2 0.8 - - - -
623B ASP* 1.3 76.7 - - + +
625B GLN* 1.3 62.6 + - + +
627B GLN* 3.4 7.8 + - - +
628B MET* 3.0 36.6 + - + +
624C VAL* 5.6 10.1 - - + -
----------------------------------------------------------
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Residues in contact with GLN 625 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
621B LYS* 3.0 44.1 + - + +
622B ARG* 2.9 22.2 + - - +
624B VAL* 1.3 77.5 - - + +
626B GLU* 1.3 59.8 + - + +
628B MET* 3.3 17.6 + - + +
629B ALA* 2.9 28.8 + - - +
----------------------------------------------------------
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Residues in contact with GLU 626 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
622B ARG* 2.9 23.1 + - + +
623B ASP* 3.8 7.6 - - - +
625B GLN* 1.3 70.3 - - - +
627B GLN* 1.3 71.1 + - - +
629B ALA* 3.1 9.4 + - - +
630B VAL* 3.0 31.7 + - + +
----------------------------------------------------------
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Residues in contact with GLN 627 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
623B ASP 3.0 14.7 + - - +
624B VAL* 3.6 8.5 - - - +
626B GLU* 1.3 80.7 - - - +
628B MET* 1.3 63.5 + - - +
630B VAL* 3.3 8.1 + - - +
631B LEU* 3.0 33.0 + - + +
627C GLN* 3.0 39.8 + - - +
631C LEU* 4.1 17.4 - - - +
----------------------------------------------------------
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Residues in contact with MET 628 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
624B VAL* 3.0 24.5 + - + +
625B GLN* 3.5 17.0 - - + +
626B GLU 3.1 0.2 - - - -
627B GLN* 1.3 78.6 - - - +
629B ALA* 1.3 55.3 + - - +
631B LEU* 3.2 12.4 + - + +
632B MET* 2.9 62.2 + - + +
----------------------------------------------------------
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Residues in contact with ALA 629 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
625B GLN 2.9 16.1 + - - +
626B GLU* 3.1 13.7 + - - +
628B MET* 1.3 76.6 - - - +
630B VAL* 1.3 62.4 + - + +
632B MET* 4.1 6.0 - - - +
633B GLN* 3.1 26.5 + - - +
----------------------------------------------------------
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Residues in contact with VAL 630 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
395B DTT 5.7 3.8 - - - -
626B GLU* 3.0 19.4 + - + +
627B GLN* 3.5 10.1 - - - +
629B ALA* 1.3 76.7 - - + +
631B LEU* 1.3 60.9 + - + +
632B MET 3.0 0.5 + - - -
633B GLN* 3.5 14.3 - - - +
634B SER* 2.6 43.8 + - - -
----------------------------------------------------------
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Residues in contact with LEU 631 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
395B DTT 3.6 33.7 - - + -
627B GLN* 3.0 25.5 + - + +
628B MET* 3.5 12.6 - - + +
630B VAL* 1.3 79.8 - - + +
632B MET* 1.3 64.3 + - + +
634B SER* 3.5 7.3 + - - -
635B ARG* 3.2 21.7 + - - +
627C GLN* 4.4 20.0 - - + +
631C LEU* 5.3 5.4 - - + -
----------------------------------------------------------
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Residues in contact with MET 632 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
628B MET* 2.9 59.0 + - + +
629B ALA* 4.1 5.2 - - - +
631B LEU* 1.3 75.7 - - + +
633B GLN* 1.3 70.5 + - - +
634B SER 3.0 0.9 - - - -
635B ARG* 2.8 36.8 + - - +
636B GLU* 3.0 24.4 - - - +
----------------------------------------------------------
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Residues in contact with GLN 633 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
629B ALA 3.1 16.5 + - - +
630B VAL* 3.5 14.9 - - - +
632B MET* 1.3 80.2 - - - +
634B SER* 1.3 87.1 + - - +
635B ARG 3.1 0.5 + - - -
636B GLU* 3.2 11.5 + - - +
637B GLN* 3.2 28.1 + - + +
----------------------------------------------------------
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Residues in contact with SER 634 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
395B DTT 3.3 30.4 - - - -
630B VAL* 2.6 28.8 + - - -
631B LEU 3.5 5.0 + - - -
632B MET 3.0 0.2 + - - -
633B GLN* 1.3 84.2 + - - +
635B ARG* 1.3 59.0 + - - +
637B GLN* 3.6 15.7 - - - +
638B VAL* 3.1 24.8 + - - +
----------------------------------------------------------
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Residues in contact with ARG 635 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
631B LEU 3.2 10.4 + - - +
632B MET* 2.8 33.3 + - - +
634B SER* 1.3 77.7 + - - +
636B GLU* 1.3 84.7 + - - +
637B GLN 2.9 1.8 - - - -
638B VAL* 3.0 29.0 - - + +
639B SER* 3.4 5.7 + - - -
----------------------------------------------------------
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Residues in contact with GLU 636 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
632B MET* 3.0 28.2 - - - +
633B GLN* 3.5 10.8 - - - +
635B ARG* 1.3 102.4 + - - +
637B GLN* 1.3 57.8 + - - +
639B SER* 3.0 11.8 - - - -
640B GLU* 2.9 43.2 + - - +
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Residues in contact with GLN 637 (chain B).
Click here for Legend to table.
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Specific contacts
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Residue Dist Surf HB Arom Phob DC
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633B GLN* 3.2 21.9 + - + +
634B SER* 3.6 19.1 - - - +
635B ARG 2.9 0.8 - - - -
636B GLU* 1.3 79.5 - - + +
638B VAL* 1.3 69.1 + - - +
640B GLU* 3.5 19.8 - - + +
641B GLU* 3.4 39.8 + - - +
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Residues in contact with VAL 638 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
634B SER* 3.1 17.9 - - - +
635B ARG* 3.0 26.5 - - + +
637B GLN* 1.3 87.3 - - - +
639B SER* 1.3 66.4 + - - +
641B GLU* 3.4 24.9 + - - +
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Residues in contact with SER 639 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
635B ARG 3.9 4.3 - - - -
636B GLU* 3.0 18.6 + - - -
638B VAL* 1.3 80.0 - - - +
640B GLU* 1.3 56.8 + - - +
641B GLU 3.0 19.7 + - - +
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Residues in contact with GLU 640 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
636B GLU* 2.9 34.8 + - - +
637B GLN* 3.5 12.9 + - + +
638B VAL 3.3 0.4 - - - -
639B SER* 1.3 76.2 - - - +
641B GLU* 1.3 67.7 + - - +
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
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Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
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Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il