Contacts of the helix formed by residues 113 - 145 (chain C) in PDB entry 2FL0


Residue contacts within the protein are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332). A short description of the analytical approach is given at the end of the page.
For CSU analysis of other PDB entry

Note:
Non-standard 3 letter residue codes indicate a heterogroup. To identify and analyse, use LPC software

Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB   - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC   - hydrophobic-hydrophilic contact (destabilizing contact)
+/-  - indicates presence/absence of a specific contacts
*    - indicates residues forming contacts  by their side chain
       (including CA atoms)
Residues in contact with ASP 113 (chain C).
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    102B  LYS*     4.6     5.6    +      -       -      +
    128B  GLU*     4.7     2.6    -      -       -      +
      4C  ASP*     5.5     3.8    +      -       +      -
      7C  VAL*     3.2    21.4    -      -       +      +
     61C  ARG*     2.8    26.1    +      -       -      -
     65C  LEU*     4.7     6.7    -      -       -      +
    108C  CYS*     2.9    21.9    +      -       +      +
    111C  VAL*     3.3    14.8    -      -       +      +
    112C  GLY*     1.3    73.4    -      -       -      +
    114C  TYR*     1.3    61.6    +      -       -      +
    115C  ALA*     4.0     1.2    +      -       -      +
    116C  SER*     2.5    24.7    +      -       -      -
    117C  ARG      3.1    13.3    +      -       -      -
----------------------------------------------------------
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Residues in contact with TYR 114 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    102B  LYS*     3.5    27.0    +      -       +      +
    105B  ILE*     3.7    25.8    -      -       +      -
    106B  ALA*     3.4    28.6    -      -       -      +
    109B  GLU*     6.0     0.2    -      -       +      -
    117B  ARG*     3.2    25.4    -      -       -      +
    121B  GLU*     3.7    20.6    -      -       -      +
    124B  LEU*     3.8     9.9    -      -       +      -
    109C  GLU*     3.6    39.7    +      -       -      -
    112C  GLY*     3.0    32.5    +      -       -      -
    113C  ASP*     1.3    69.1    -      -       -      +
    115C  ALA*     1.3    66.4    +      -       -      +
    117C  ARG*     2.9    18.7    +      -       -      +
    118C  GLU*     2.9    15.9    +      -       -      +
----------------------------------------------------------
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Residues in contact with ALA 115 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    102B  LYS*     5.6     0.4    -      -       -      +
    121B  GLU*     4.1    13.7    +      -       -      +
    124B  LEU*     4.5     4.4    -      -       +      +
    125B  GLU*     4.5    20.5    -      -       +      +
    128B  GLU*     3.5    23.7    +      -       -      +
     61C  ARG*     3.4    20.8    -      -       -      +
    113C  ASP      3.4     0.6    -      -       -      -
    114C  TYR*     1.3    76.4    -      -       -      +
    116C  SER*     1.3    63.5    +      -       -      +
    118C  GLU*     3.2    12.6    +      -       -      +
    119C  LEU*     3.2    13.0    +      -       -      +
----------------------------------------------------------
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Residues in contact with SER 116 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
      7C  VAL*     4.2     4.3    -      -       -      +
     11C  LEU*     4.2     8.6    -      -       -      +
     61C  ARG*     2.7    30.0    +      -       -      +
     65C  LEU*     4.0     5.0    -      -       -      +
    108C  CYS*     3.7    12.3    -      -       -      -
    113C  ASP*     2.5    34.8    +      -       -      -
    114C  TYR      3.2     1.0    -      -       -      -
    115C  ALA*     1.3    77.2    -      -       -      +
    117C  ARG*     1.3    63.1    +      -       -      +
    119C  LEU*     3.2     8.9    +      -       -      +
    120C  LEU*     3.0    26.9    +      -       -      +
----------------------------------------------------------
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Residues in contact with ARG 117 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    117B  ARG*     4.2    10.4    -      -       -      +
    105C  ILE*     3.8    20.7    -      -       +      +
    108C  CYS*     3.9    16.9    -      -       +      +
    109C  GLU*     2.7    56.9    +      -       -      +
    113C  ASP      3.1    11.9    +      -       -      +
    114C  TYR*     2.9    13.1    +      -       -      +
    116C  SER*     1.3    77.4    -      -       -      +
    118C  GLU*     1.3    58.6    +      -       -      +
    120C  LEU*     3.3     7.7    +      -       -      +
    121C  GLU*     2.8    64.9    +      -       +      +
    109F  GLU*     2.6    30.7    +      -       -      -
    114F  TYR*     3.6    17.2    -      -       -      -
    117F  ARG*     3.8    18.1    -      -       -      +
----------------------------------------------------------
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Residues in contact with GLU 118 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    117B  ARG*     5.9     0.7    +      -       -      -
    118B  GLU*     3.9     8.9    -      -       -      +
    121B  GLU*     2.8    36.9    -      -       +      +
    125B  GLU*     3.9    17.6    -      -       -      +
    114C  TYR      2.9     7.6    +      -       -      +
    115C  ALA      3.2     9.6    +      -       -      +
    117C  ARG*     1.3    76.6    -      -       +      +
    119C  LEU*     1.3    64.6    +      -       -      +
    121C  GLU*     2.6    20.6    +      -       -      +
    122C  ASP*     3.0    35.7    +      -       -      +
    118F  GLU*     5.2     1.9    -      -       -      +
   1711F   MG      2.5    29.0    -      -       -      -
----------------------------------------------------------
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Residues in contact with LEU 119 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     11C  LEU*     5.3     2.0    -      -       +      -
     57C  LYS*     3.6    38.1    -      -       +      +
     58C  LEU*     3.9    25.8    -      -       +      -
     61C  ARG*     4.1    29.8    -      -       +      -
    115C  ALA      3.2     8.5    +      -       -      +
    116C  SER*     3.3    10.5    -      -       -      +
    118C  GLU*     1.3    79.0    -      -       -      +
    120C  LEU*     1.3    70.0    +      -       +      +
    122C  ASP*     2.9    22.1    +      -       +      +
    123C  ILE*     3.2    22.0    +      -       +      +
----------------------------------------------------------
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Residues in contact with LEU 120 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     11C  LEU*     3.9    22.7    -      -       +      -
     14C  ILE*     4.4     7.9    -      -       +      -
     58C  LEU*     4.1    20.4    -      -       +      -
    101C  LEU*     4.0    21.5    -      -       +      +
    104C  ALA*     3.5    42.2    -      -       +      +
    105C  ILE*     3.7    18.2    -      -       +      +
    108C  CYS*     4.1    12.6    -      -       -      -
    116C  SER      3.0    16.0    +      -       -      +
    117C  ARG*     3.8     2.2    -      -       -      +
    119C  LEU*     1.3    82.3    -      -       +      +
    121C  GLU*     1.3    56.9    +      -       -      +
    123C  ILE*     3.4     6.1    +      -       +      +
    124C  LEU*     2.9    30.1    +      -       -      +
----------------------------------------------------------
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Residues in contact with GLU 121 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    105C  ILE*     4.1    13.0    -      -       +      -
    117C  ARG*     2.8    61.0    +      -       +      +
    118C  GLU*     2.6    37.4    +      -       -      +
    120C  LEU*     1.3    76.4    -      -       -      +
    122C  ASP*     1.3    63.1    +      -       -      +
    124C  LEU*     3.3    10.0    -      -       +      +
    125C  GLU*     3.1    35.5    +      -       -      +
    114F  TYR*     4.3    12.7    -      -       +      +
    117F  ARG*     5.2     0.7    -      -       -      -
    118F  GLU*     3.2    20.5    -      -       +      +
   1711F   MG      3.1     7.3    -      -       -      -
----------------------------------------------------------
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Residues in contact with ASP 122 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     57C  LYS*     5.6    10.2    -      -       -      +
    118C  GLU*     3.0    22.8    +      -       -      +
    119C  LEU*     2.9    17.2    +      -       +      +
    121C  GLU*     1.3    74.0    -      -       -      +
    123C  ILE*     1.3    70.6    +      -       +      +
    125C  GLU*     3.0    26.4    +      -       -      +
    126C  SER*     3.1    11.9    +      -       -      -
----------------------------------------------------------
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Residues in contact with ILE 123 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     14C  ILE*     5.2     1.3    -      -       +      -
     18C  GLU*     3.9     8.3    -      -       -      +
     54C  HIS*     3.6    54.1    -      -       +      +
     57C  LYS*     4.9     3.8    -      -       +      -
     58C  LEU*     4.0    19.7    -      -       +      -
    101C  LEU*     4.3    11.2    -      -       +      -
    119C  LEU*     3.2    28.9    +      -       +      +
    120C  LEU*     3.7    11.7    -      -       +      +
    122C  ASP*     1.3    75.2    -      -       +      +
    124C  LEU*     1.3    58.5    +      -       -      +
    126C  SER*     3.0     5.9    +      -       -      -
    127C  GLU*     2.8    55.1    +      -       +      +
----------------------------------------------------------
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Residues in contact with LEU 124 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     98C  LEU*     3.3    32.5    -      -       +      -
    101C  LEU*     4.1    18.2    -      -       +      -
    102C  LYS*     4.3    15.0    -      -       +      -
    105C  ILE*     3.7    24.7    -      -       +      -
    120C  LEU      2.9    15.4    +      -       -      +
    121C  GLU*     3.3    11.0    -      -       -      +
    123C  ILE*     1.3    76.5    -      -       -      +
    125C  GLU*     1.3    63.0    +      -       +      +
    127C  GLU*     3.0     2.8    +      -       -      +
    128C  GLU*     3.0    33.2    +      -       +      +
    114F  TYR*     3.8    25.4    -      -       +      -
    115F  ALA*     4.4    10.8    -      -       +      +
----------------------------------------------------------
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Residues in contact with GLU 125 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    121C  GLU*     3.1    18.5    +      -       -      +
    122C  ASP*     3.0    17.5    +      -       -      +
    124C  LEU*     1.3    76.7    -      -       +      +
    126C  SER*     1.3    62.7    +      -       -      +
    128C  GLU*     3.4     9.5    +      -       -      +
    129C  ASP*     3.2    26.6    +      -       -      +
    115F  ALA*     4.4    20.9    -      -       +      -
    118F  GLU*     3.6    30.9    -      -       -      +
----------------------------------------------------------
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Residues in contact with SER 126 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     50C  ASP*     4.9     3.5    +      -       -      +
     54C  HIS*     3.1    30.6    +      -       -      -
    122C  ASP      3.1     8.7    +      -       -      -
    123C  ILE*     3.0    10.4    +      -       -      -
    125C  GLU*     1.3    79.3    -      -       -      +
    127C  GLU*     1.3    61.0    +      -       -      +
    129C  ASP*     3.2    20.8    +      -       -      +
    130C  HIS*     3.2    26.7    +      -       -      -
----------------------------------------------------------
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Residues in contact with GLU 127 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     18C  GLU*     3.2     9.4    -      -       -      +
     54C  HIS*     3.0     9.3    +      -       -      -
     94C  GLU*     2.7    19.9    -      -       -      +
     98C  LEU*     4.6    11.7    -      -       +      -
    101C  LEU*     3.7    24.9    -      -       +      -
    123C  ILE*     2.8    21.4    +      -       -      +
    124C  LEU*     3.0     5.6    +      -       -      +
    126C  SER*     1.3    77.1    -      -       -      +
    128C  GLU*     1.3    63.0    +      -       -      +
    130C  HIS*     3.2     3.7    +      -       -      +
    131C  ILE*     2.9    28.1    +      -       +      +
   1608C  FE2      1.9    29.0    -      -       -      -
   1610C  FE2      1.9    31.0    -      -       -      -
----------------------------------------------------------
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Residues in contact with GLU 128 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     98C  LEU*     4.7     5.0    -      -       +      +
    102C  LYS*     4.1    16.6    +      -       -      -
    124C  LEU*     3.0    27.7    +      -       +      +
    125C  GLU*     3.8     7.9    -      -       -      +
    126C  SER      3.3     0.2    -      -       -      -
    127C  GLU*     1.3    76.1    -      -       -      +
    129C  ASP*     1.3    57.6    +      -       -      +
    131C  ILE*     3.5     8.4    +      -       -      +
    132C  ASP*     2.9    27.4    +      -       -      +
      1F  MET*     3.6    25.1    -      -       +      +
     61F  ARG*     3.0    37.8    +      -       -      +
     64F  PHE*     3.5    18.0    -      -       +      -
    113F  ASP*     4.8     1.2    -      -       -      +
    115F  ALA*     3.2    16.8    -      -       -      +
----------------------------------------------------------
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Residues in contact with ASP 129 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    125C  GLU*     3.2    14.9    +      -       -      +
    126C  SER*     3.2    14.3    +      -       -      +
    127C  GLU      3.1     0.2    -      -       -      -
    128C  GLU*     1.3    74.4    -      -       -      +
    130C  HIS*     1.3    70.7    +      -       +      +
    132C  ASP*     2.9    10.1    +      -       -      +
    133C  TRP*     2.8    24.0    +      -       -      +
----------------------------------------------------------
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Residues in contact with HIS 130 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     43C  HIS*     5.9     3.8    -      +       -      -
     47C  GLU*     3.8    33.2    -      -       +      +
     50C  ASP*     3.3    29.9    +      -       +      -
     51C  GLU*     3.3    13.2    +      -       -      -
     54C  HIS*     4.6     1.1    -      +       -      -
     94C  GLU*     2.9    19.4    +      -       +      +
    126C  SER*     3.2    24.8    +      -       -      -
    127C  GLU*     3.5     7.0    +      -       -      +
    129C  ASP*     1.3    81.4    -      -       +      +
    131C  ILE*     1.3    65.9    +      -       -      +
    132C  ASP      3.1     0.2    +      -       -      -
    133C  TRP*     3.1     6.2    +      -       -      +
    134C  LEU*     2.8    29.3    +      -       +      +
   1610C  FE2      2.6    26.4    -      -       -      -
----------------------------------------------------------
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Residues in contact with ILE 131 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     91C  LEU*     4.0    11.4    -      -       +      -
     94C  GLU*     3.4    43.1    -      -       +      +
     95C  GLN*     4.1     8.7    -      -       +      +
     98C  LEU*     3.8    26.2    -      -       +      -
    127C  GLU*     2.9    18.3    +      -       +      +
    128C  GLU*     3.6    11.2    -      -       -      +
    130C  HIS*     1.3    76.8    -      -       -      +
    132C  ASP*     1.3    57.4    +      -       -      +
    134C  LEU*     3.6     7.6    -      -       -      +
    135C  GLU*     2.9    58.5    +      -       -      +
      1F  MET*     4.1    19.1    -      -       +      -
     64F  PHE*     4.9     0.9    -      -       +      -
----------------------------------------------------------
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Residues in contact with ASP 132 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    128C  GLU      2.9     9.4    +      -       -      +
    129C  ASP*     2.9    14.1    +      -       -      +
    131C  ILE*     1.3    74.3    -      -       -      +
    133C  TRP*     1.3    62.4    +      -       -      +
    135C  GLU*     3.3     4.9    +      -       -      +
    136C  THR*     2.7    41.8    +      -       -      -
   1706C   MG      4.0    11.4    -      -       -      -
     34E  ASP*     4.7     9.7    -      -       -      +
     64F  PHE*     3.2    39.8    -      -       +      +
----------------------------------------------------------
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Residues in contact with TRP 133 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     40C  LEU*     3.7    28.0    -      -       +      -
     43C  HIS*     3.2    60.1    +      +       +      +
     44C  GLU*     4.4    12.6    -      -       -      -
     47C  GLU*     4.3     6.7    -      -       -      -
     87C  LEU*     4.2     6.3    -      -       +      -
    129C  ASP      2.8    14.5    +      -       -      +
    130C  HIS*     3.7     7.6    -      -       -      +
    132C  ASP*     1.3    72.6    -      -       -      +
    134C  LEU*     1.3    91.1    +      -       +      +
    136C  THR*     3.2     6.2    +      -       +      -
    137C  GLN*     3.0    66.9    +      -       +      +
    153C  GLN*     5.6     2.2    -      -       -      -
----------------------------------------------------------
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Residues in contact with LEU 134 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     47C  GLU*     4.5     7.9    -      -       -      +
     87C  LEU*     3.9    28.0    -      -       +      +
     90C  ASP*     3.7    21.8    -      -       +      +
     91C  LEU*     3.5    40.6    -      -       +      +
     94C  GLU*     3.9    15.5    -      -       +      -
    130C  HIS      2.8    21.4    +      -       -      +
    131C  ILE      3.6     3.8    -      -       -      +
    133C  TRP*     1.3   102.7    -      -       +      +
    135C  GLU*     1.3    63.4    +      -       -      +
    137C  GLN*     3.0    15.3    +      -       -      +
    138C  LEU*     3.1    18.2    +      -       +      +
----------------------------------------------------------
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Residues in contact with GLU 135 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     91C  LEU*     4.1    15.3    -      -       +      +
     95C  GLN*     4.3    10.6    +      -       -      -
    131C  ILE*     2.9    40.5    +      -       +      +
    132C  ASP*     3.8     6.3    -      -       -      +
    134C  LEU*     1.3    72.6    -      -       -      +
    136C  THR*     1.3    63.1    +      -       -      +
    138C  LEU*     3.3    12.0    +      -       -      +
    139C  ASP*     3.1    33.7    +      -       -      +
   1706C   MG      4.3     3.3    -      -       -      -
      1F  MET*     2.8    40.8    +      -       -      +
     64F  PHE*     4.0     6.9    -      -       -      -
     66F  GLU*     4.4     3.2    -      -       -      +
----------------------------------------------------------
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Residues in contact with THR 136 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    132C  ASP*     2.7    31.5    +      -       -      -
    133C  TRP*     3.4     8.5    -      -       +      -
    134C  LEU      3.1     0.2    -      -       -      -
    135C  GLU*     1.3    78.8    -      -       -      +
    137C  GLN*     1.3    62.7    +      -       -      +
    139C  ASP*     3.4     8.1    +      -       -      +
    140C  LEU*     2.9    35.7    +      -       +      +
     34E  ASP      4.0    10.6    +      -       -      +
     35E  TRP*     3.6    30.3    -      -       -      +
     36E  GLY*     3.9    10.8    -      -       -      +
----------------------------------------------------------
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Residues in contact with GLN 137 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     87C  LEU*     4.1    13.5    -      -       +      -
    133C  TRP*     3.0    69.6    +      -       +      +
    134C  LEU*     3.0     6.0    +      -       -      +
    136C  THR*     1.3    85.0    -      -       -      +
    138C  LEU*     1.3    66.0    +      -       -      +
    140C  LEU*     3.4    13.7    +      -       -      +
    141C  ILE*     3.0    30.7    +      -       -      +
    149C  TYR*     2.6    42.1    +      -       +      +
    153C  GLN*     4.4     4.3    +      -       -      +
    154E  MET*     5.2     0.5    -      -       -      +
----------------------------------------------------------
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Residues in contact with LEU 138 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     84C  LYS*     4.0    31.7    -      -       +      +
     87C  LEU*     3.9    23.8    -      -       +      +
     88C  GLU*     4.0    24.2    -      -       +      +
     91C  LEU*     3.5    32.8    -      -       +      -
    134C  LEU      3.1    12.5    +      -       -      +
    135C  GLU*     3.3     8.7    +      -       -      +
    137C  GLN*     1.3    77.1    -      -       -      +
    139C  ASP*     1.3    62.8    +      -       -      +
    141C  ILE*     3.6     9.9    -      -       +      +
    142C  ASP*     3.3    19.9    +      -       -      +
----------------------------------------------------------
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Residues in contact with ASP 139 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    135C  GLU*     3.1    23.8    +      -       -      +
    136C  THR*     3.8     7.2    -      -       -      +
    137C  GLN      3.2     0.2    -      -       -      -
    138C  LEU*     1.3    76.8    -      -       -      +
    140C  LEU*     1.3    68.0    +      -       +      +
    141C  ILE      3.2     0.2    -      -       -      -
    142C  ASP*     3.0     9.0    +      -       -      +
    143C  LYS*     2.9    48.0    +      -       +      +
     35E  TRP*     5.8     3.9    -      -       +      +
----------------------------------------------------------
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Residues in contact with LEU 140 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    136C  THR*     2.9    32.1    +      -       +      +
    137C  GLN*     3.6    20.0    -      -       -      +
    139C  ASP*     1.3    76.3    -      -       +      +
    141C  ILE*     1.3    65.3    +      -       -      +
    143C  LYS*     2.8    24.3    +      -       +      +
    144C  ILE*     2.8    24.3    +      -       +      +
    149C  TYR*     4.1     6.3    -      -       +      -
     35E  TRP      2.9    24.9    -      -       -      +
     36E  GLY*     4.5     7.9    -      -       -      +
     37E  LEU*     4.8    14.1    -      -       +      -
    154E  MET*     3.2    38.1    -      -       +      -
----------------------------------------------------------
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Residues in contact with ILE 141 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
     83C  THR*     4.7     0.7    -      -       +      -
     84C  LYS*     4.4    35.0    -      -       +      -
     87C  LEU*     4.2    23.3    -      -       +      -
    137C  GLN      3.0    19.6    +      -       -      +
    138C  LEU*     3.6    13.5    -      -       +      +
    140C  LEU*     1.3    76.6    -      -       -      +
    142C  ASP*     1.3    60.6    +      -       -      +
    145C  GLY*     2.9    30.2    +      -       -      +
    146C  LEU*     4.0    35.4    -      -       +      +
    149C  TYR*     3.7    32.3    -      -       +      -
----------------------------------------------------------
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Residues in contact with ASP 142 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    138C  LEU      3.3    10.2    +      -       -      +
    139C  ASP*     3.0    13.4    +      -       -      +
    141C  ILE*     1.3    81.4    -      -       +      +
    143C  LYS*     1.3    61.0    +      -       +      +
    145C  GLY*     4.7     0.9    -      -       -      -
----------------------------------------------------------
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Residues in contact with LYS 143 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    139C  ASP*     2.9    34.6    +      -       -      +
    140C  LEU*     2.8    16.8    +      -       +      +
    142C  ASP*     1.3    83.1    -      -       +      +
    144C  ILE*     1.3    63.9    +      -       +      +
    145C  GLY      3.5     0.2    -      -       -      -
     35E  TRP*     3.2    50.0    +      -       +      +
     37E  LEU*     5.9     4.0    -      -       +      -
    146E  LEU*     5.6     2.1    -      -       -      +
    147E  GLU*     4.1    14.2    -      -       -      +
    150E  LEU*     4.1    27.9    -      -       +      +
----------------------------------------------------------
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Residues in contact with ILE 144 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    140C  LEU*     2.8    22.9    +      -       +      +
    143C  LYS*     1.3    80.2    -      -       +      +
    145C  GLY*     1.3    68.5    +      -       -      +
    148C  ASN*     2.9    39.5    +      -       +      +
    149C  TYR*     3.3    31.0    -      -       +      +
     37E  LEU*     5.9     0.4    -      -       +      -
    147E  GLU*     3.5    27.4    -      -       -      +
    150E  LEU*     3.8    24.9    -      -       +      -
    151E  GLN*     3.9    11.9    -      -       +      +
    154E  MET*     3.7    29.2    -      -       +      -
----------------------------------------------------------
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Residues in contact with GLY 145 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    141C  ILE      2.9    16.4    +      -       -      -
    142C  ASP      4.7     0.4    -      -       -      -
    143C  LYS      3.5     1.2    -      -       -      -
    144C  ILE*     1.3    78.7    -      -       -      +
    146C  LEU*     1.3    66.8    +      -       -      -
    147C  GLU      3.1     3.9    +      -       -      -
    148C  ASN      3.2     2.8    +      -       -      -
    149C  TYR*     2.9    24.1    +      -       -      +
    147E  GLU*     5.7     0.4    -      -       -      -
----------------------------------------------------------
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A short description of the analytical approach
The contact analysis used in this page is based upon the approach developed in: Sobolev V., Wade R.C., Vriend G. and Edelman M. PROTEINS (1996) 25, 120-129. Contact legitimacy depends on the hydrophobic-hydrophilic properties of the contacting atoms. In order to define it, for each inter-atomic contact, eight atom classes have been introduced:


   I  Hydrophilic      - N and O that can donate and accept hydrogen bonds
                         (e.g., oxygen of hydroxyl group of Ser. or Thr)
  II  Acceptor         - N or O that can only accept a hydrogen bond
 III  Donor            - N that can only donate a hydrogen bond
  IV  Hydrophobic      - Cl, Br, I and all C atoms that are not in
                         aromatic rings and do not have a covalent bond to
                         a N or O atom
   V  Aromatic         - C in aromatic rings irrespective of any other 
                         bonds formed by the atom
  VI  Neutral          - C atoms that have a covalent bond to at least one
                         atom of class I or two or more atoms from class II
                         or III; atoms; S, F, P, and metal atoms in all cases
 VII  Neutral-donor    - C atoms that have a covalent bond with only one
                         atom of class III
VIII  Neutral-acceptor - C atoms that have a covalent bond with only 
                         one atom of class II
For each pair of contacts the state of legitimacy is shown below:

Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
  Atomic class           I  II  III   IV   V   VI  VII  VIII
------------------------------------------------------------
   I  (Hydrophilic)      +   +    +    -   +   +    +    +
  II  (Acceptor)         +   -    +    -   +   +    +    -
 III  (Donor)            +   +    -    -   +   +    -    +
  IV  (Hydrophobic)      -   -    -    +   +   +    +    +
   V  (Aromatic)         +   +    +    +   +   +    +    +
  VI  (Neutral)          +   +    +    +   +   +    +    +
 VII  (Neutral-donor)    +   +    -    +   +   +    -    +
VIII  (Neutral-acceptor) +   -    +    +   +   +    +    -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically assigned based on the atomic coordinates. However, in three cases (see below) the automatic assignment is currently ambiguous. In these cases, the user is advised to manually analyse the full list of contacts using LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are 
   considered "aromatic" (Class V) if the ring is approximately
   planar, and "hydrophobic" (Class IV) or "neutral" (Classes
   VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
   "hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
   "carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).

Please E-mail any questions and/or suggestions concerning this page to Vladimir.Sobolev@weizmann.ac.il