Contacts of the helix formed by residues 143 - 240 (chain B) in PDB entry 2N5E
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with PRO 143 (chain B).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
117B GLN* 2.6 34.3 - - - +
118B LYS* 3.2 9.2 - - + +
120B GLU* 1.3 98.2 - - + +
144B LEU* 1.3 62.6 + - + +
146B GLU* 3.8 2.5 - - + +
147B GLU* 3.0 29.5 + - - +
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Residues in contact with LEU 144 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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118B LYS* 2.8 55.3 + - + +
119B VAL* 4.8 0.2 - - - -
143B PRO* 1.3 71.2 - - + +
145B GLY* 1.3 59.4 + - - +
146B GLU 2.7 2.8 + - - -
147B GLU* 2.7 3.3 + - + -
148B MET* 2.7 73.7 + - + +
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Residues in contact with GLY 145 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115A TYR* 5.6 5.8 - - - -
119B VAL* 2.7 34.4 + - - +
144B LEU* 1.3 76.9 - - - +
146B GLU* 1.3 54.5 + - - -
148B MET* 4.6 5.2 - - - -
149B ARG* 2.8 36.0 + - - +
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Residues in contact with GLU 146 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
116A ARG* 5.3 7.9 + - - +
119B VAL 3.3 0.8 + - - -
120B GLU* 2.8 28.6 + - - +
143B PRO* 3.8 3.2 - - + +
144B LEU 2.7 5.7 + - - -
145B GLY* 1.3 71.5 - - - +
147B GLU* 1.3 60.9 + - - +
149B ARG* 4.1 1.7 - - - +
150B ASP* 2.8 38.0 + - + +
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Residues in contact with GLU 147 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
143B PRO 3.0 18.9 + - - +
144B LEU* 2.7 8.4 + - + +
146B GLU* 1.3 73.2 - - - +
148B MET* 1.3 73.0 + - + +
150B ASP* 3.9 5.3 - - - +
151B ARG* 2.7 43.1 + - + +
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Residues in contact with MET 148 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
144B LEU* 2.7 58.9 + - + +
145B GLY* 4.4 2.9 - - - +
147B GLU* 1.3 90.4 - - + +
149B ARG* 1.3 60.3 + - - +
151B ARG* 3.9 28.1 - - - +
152B ALA* 2.8 34.3 + - - +
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Residues in contact with ARG 149 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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108A TRP* 3.2 40.7 - - - +
111A GLU* 4.5 5.9 + - - +
112A MET* 3.4 49.6 - - + +
115A TYR* 3.6 36.5 - - - +
145B GLY* 2.8 24.9 + - - +
146B GLU* 4.1 2.5 - - - +
148B MET* 1.3 79.1 - - - +
150B ASP* 1.3 61.1 + - - +
152B ALA* 3.5 4.4 - - - +
153B ARG* 3.2 22.2 + - - +
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Residues in contact with ASP 150 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
146B GLU* 2.8 27.0 + - + +
147B GLU* 3.9 5.6 - - - +
149B ARG* 1.3 75.1 - - - +
151B ARG* 1.3 67.7 + - - +
153B ARG* 3.2 16.3 + - - +
154B ALA* 3.2 15.3 + - - +
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Residues in contact with ARG 151 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
147B GLU* 2.7 29.4 + - + +
148B MET* 3.9 29.7 + - - +
150B ASP* 1.3 77.4 - - - +
152B ALA* 1.3 54.4 + - - +
154B ALA* 3.7 4.9 - - - +
155B HIS* 2.7 59.4 + - + +
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Residues in contact with ALA 152 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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108A TRP* 4.4 26.2 - - + -
148B MET 2.8 20.2 + - - +
149B ARG* 3.5 9.2 - - - +
151B ARG* 1.3 77.7 - - - +
153B ARG* 1.3 58.1 + - - +
155B HIS* 3.6 5.5 + - - +
156B VAL* 2.7 39.9 + - - +
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Residues in contact with ARG 153 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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105A GLN* 4.4 25.9 + - - +
108A TRP* 6.0 11.6 - - + -
109A GLN* 4.4 24.9 - - - +
149B ARG* 3.2 10.1 + - - +
150B ASP* 3.2 10.9 + - - +
152B ALA* 1.3 77.8 - - - +
154B ALA* 1.3 58.9 + - - +
156B VAL* 3.1 11.5 - - - +
157B ASP* 3.0 52.4 + - - +
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Residues in contact with ALA 154 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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150B ASP* 3.2 15.1 + - - +
151B ARG* 4.0 5.4 - - - +
153B ARG* 1.3 79.7 - - - +
155B HIS* 1.3 64.7 + - - +
157B ASP* 3.8 5.6 - - - +
158B ALA* 3.3 23.4 + - - +
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Residues in contact with HIS 155 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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151B ARG* 2.7 47.2 + - + +
152B ALA* 3.6 6.2 + - - +
154B ALA* 1.3 73.2 - - - +
156B VAL* 1.3 67.8 + - - +
158B ALA* 3.9 3.0 - - - +
159B LEU* 3.0 54.4 + - + +
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Residues in contact with VAL 156 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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104A PHE* 4.9 15.0 - - + -
105A GLN* 4.3 20.0 - - - +
108A TRP* 5.2 15.3 - - + -
152B ALA 2.7 30.9 + - - +
153B ARG* 3.1 20.0 - - - +
155B HIS* 1.3 76.5 + - - +
157B ASP* 1.3 66.5 + - - +
159B LEU* 3.6 5.6 - - + -
160B ARG* 2.7 52.0 + - + +
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Residues in contact with ASP 157 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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105A GLN* 6.0 6.4 - - + +
153B ARG* 3.0 36.6 + - - +
154B ALA* 3.8 8.4 - - - +
156B VAL* 1.3 83.7 - - - +
158B ALA* 1.3 60.5 + - - +
160B ARG* 3.6 5.5 - - - +
161B THR* 2.8 37.2 + - - -
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Residues in contact with ALA 158 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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154B ALA 3.3 14.5 + - - +
155B HIS* 3.9 3.6 - - - +
156B VAL 3.3 0.2 - - - -
157B ASP* 1.3 80.7 + - - +
159B LEU* 1.3 67.6 + - - +
161B THR* 3.1 8.9 + - - -
162B HIS* 3.1 24.4 + - - +
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Residues in contact with LEU 159 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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155B HIS* 3.0 49.1 + - + +
156B VAL* 3.7 7.9 - - + +
158B ALA* 1.3 76.9 - - - +
160B ARG* 1.3 52.5 + - - +
162B HIS* 3.7 5.1 - - - +
163B LEU* 2.7 52.6 + - + +
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Residues in contact with ARG 160 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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100A TYR* 3.7 32.4 + - - -
101A LEU* 3.7 32.8 - - + +
104A PHE* 3.9 31.5 - - - +
105A GLN* 4.7 14.5 - - - +
156B VAL* 2.7 33.5 + - + +
157B ASP* 3.6 5.8 - - - +
159B LEU* 1.3 71.7 - - - +
161B THR* 1.3 59.4 + - - +
163B LEU* 3.6 30.2 - - - +
164B ALA* 2.8 32.4 + - - +
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Residues in contact with THR 161 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
157B ASP* 2.8 28.7 + - - -
158B ALA* 3.1 9.4 + - - -
160B ARG* 1.3 76.9 - - - +
162B HIS* 1.3 65.3 + - + +
164B ALA* 3.5 5.3 - - - +
165B PRO* 3.1 21.0 - - - +
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Residues in contact with HIS 162 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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158B ALA 3.1 15.4 + - - +
159B LEU* 4.0 4.7 - - - +
161B THR* 1.3 81.5 - - + +
163B LEU* 1.3 61.2 + - - +
164B ALA 3.1 1.8 - - - -
165B PRO* 3.1 23.3 - - + +
166B TYR* 3.3 14.6 + - - +
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Residues in contact with LEU 163 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
159B LEU* 2.7 36.9 + - + +
160B ARG* 3.1 35.6 + - - +
162B HIS* 1.3 75.3 - - - +
164B ALA* 1.3 61.7 + - - +
166B TYR* 4.2 12.8 - - + -
167B SER* 2.7 48.2 + - - +
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Residues in contact with ALA 164 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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101A LEU* 6.6 0.4 - - + -
160B ARG* 2.8 12.5 + - + +
161B THR* 3.5 10.1 - - - +
163B LEU* 1.3 82.3 - - - +
165B PRO* 1.3 70.2 - - + +
167B SER* 3.3 13.5 - - - -
168B ASP* 3.8 5.0 + - - +
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Residues in contact with PRO 165 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
161B THR 3.1 14.8 - - - +
162B HIS* 3.1 18.4 - - + +
164B ALA* 1.3 94.9 - - + +
166B TYR* 1.3 64.2 + - + +
167B SER 3.1 2.3 + - - -
168B ASP* 3.3 8.7 + - + +
169B GLU* 3.2 26.8 + - + +
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Residues in contact with TYR 166 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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162B HIS 3.3 17.4 + - - +
163B LEU* 4.1 10.8 - - + +
165B PRO* 1.3 81.0 - - - +
167B SER* 1.3 55.3 + - - +
169B GLU* 4.3 10.5 - - + -
170B LEU* 2.7 63.3 + - + +
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Residues in contact with SER 167 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
163B LEU* 2.7 33.9 + - - +
164B ALA* 3.3 8.3 - - - -
165B PRO 3.1 0.4 - - - -
166B TYR* 1.3 77.8 - - - +
168B ASP* 1.3 58.2 + - - +
170B LEU* 3.8 4.6 - - - +
171B ARG* 2.9 42.3 + - - +
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Residues in contact with ASP 168 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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94A LYS* 4.7 14.7 - - - -
164B ALA 3.8 4.6 + - - +
165B PRO* 3.3 9.9 + - + +
167B SER* 1.3 77.6 + - - +
169B GLU* 1.3 69.1 + - + +
171B ARG* 3.2 6.6 + - - +
172B GLN* 2.7 44.3 + - - +
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Residues in contact with GLU 169 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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165B PRO* 3.2 15.7 + - + +
166B TYR* 3.7 17.5 - - + +
168B ASP* 1.3 81.1 - - + +
170B LEU* 1.3 62.8 + - - +
172B GLN* 3.1 17.0 + - - +
173B ARG* 3.2 13.8 + - - +
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Residues in contact with LEU 170 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
166B TYR* 2.7 50.1 + - + +
167B SER* 3.8 5.8 - - - +
169B GLU* 1.3 72.3 - - - +
171B ARG* 1.3 69.1 + - + +
173B ARG* 3.1 24.0 + - - +
174B LEU* 2.8 51.9 + - + -
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Residues in contact with ARG 171 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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86A MET* 6.0 1.0 - - - +
89A ASP* 6.3 0.2 - - - +
90A LEU* 3.9 38.2 - - + +
93A VAL* 4.5 29.4 - - - +
167B SER* 2.9 33.6 + - - +
168B ASP* 3.2 9.4 + - - +
170B LEU* 1.3 85.5 - - + +
172B GLN* 1.3 60.5 + - - +
174B LEU* 4.5 6.0 - - + +
175B ALA* 2.7 37.9 + - - +
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Residues in contact with GLN 172 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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90A LEU* 5.6 8.2 - - - +
168B ASP* 2.7 44.2 + - - +
169B GLU* 3.1 12.3 + - - +
171B ARG* 1.3 82.3 - - - +
173B ARG* 1.3 65.5 + - - +
175B ALA* 3.9 5.5 - - - +
176B ALA* 3.1 25.1 + - - +
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Residues in contact with ARG 173 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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169B GLU 3.2 7.6 + - - +
170B LEU* 3.1 22.8 + - - +
172B GLN* 1.3 78.8 - - - +
174B LEU* 1.3 59.8 + - - +
176B ALA* 3.5 6.4 + - - +
177B ARG* 3.0 67.4 + - - +
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Residues in contact with LEU 174 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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170B LEU* 2.8 39.6 + - + +
171B ARG* 4.0 6.5 - - - +
173B ARG* 1.3 75.3 - - - +
175B ALA* 1.3 65.9 + - - +
176B ALA 3.1 1.6 - - - -
177B ARG* 2.9 22.2 + - + +
178B LEU* 3.1 31.8 + - + +
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Residues in contact with ALA 175 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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86A MET* 5.9 6.7 - - + -
90A LEU* 6.0 6.7 - - + -
171B ARG 2.7 24.0 + - - +
172B GLN* 3.9 8.3 - - - +
174B LEU* 1.3 74.2 - - - +
176B ALA* 1.3 57.5 + - - +
178B LEU* 3.1 32.1 - - + +
179B GLU* 3.2 19.1 + - - +
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Residues in contact with ALA 176 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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172B GLN 3.1 17.4 + - - +
173B ARG* 3.7 6.1 - - - +
174B LEU 3.1 0.6 - - - -
175B ALA* 1.3 76.7 - - - +
177B ARG* 1.3 58.3 + - - +
179B GLU* 4.4 4.5 - - - -
180B ALA* 2.7 38.3 + - + +
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Residues in contact with ARG 177 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
173B ARG* 3.0 59.3 + - + +
174B LEU* 2.9 19.1 + - + +
176B ALA* 1.3 77.6 - - - +
178B LEU* 1.3 62.0 + - - +
180B ALA* 3.9 3.0 - - - +
181B LEU* 3.1 27.6 + - - +
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Residues in contact with LEU 178 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82A LEU* 6.3 1.3 - - + -
86A MET* 4.2 30.7 - - + -
174B LEU* 3.1 32.7 + - + +
175B ALA* 3.1 23.6 - - + +
177B ARG* 1.3 76.4 - - - +
179B GLU* 1.3 89.0 + - + +
181B LEU* 3.3 8.3 + - - +
182B LYS* 3.1 21.8 + - - +
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Residues in contact with GLU 179 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82A LEU* 4.1 11.7 - - - +
83A ARG* 3.6 41.0 + - - +
86A MET* 5.2 5.2 - - - +
175B ALA* 3.2 19.8 + - - +
176B ALA* 4.0 4.5 - - - +
178B LEU* 1.3 91.3 - - - +
180B ALA* 1.3 62.7 + - - +
182B LYS* 3.0 18.1 + - + +
183B GLU* 3.0 14.3 + - - +
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Residues in contact with ALA 180 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
176B ALA* 2.7 25.9 + - + +
177B ARG* 3.9 5.8 - - - +
179B GLU* 1.3 72.2 - - - +
181B LEU* 1.3 64.4 + - - +
183B GLU* 2.9 35.2 + - - +
184B ASN* 3.6 8.5 + - - +
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Residues in contact with LEU 181 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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177B ARG 3.1 21.0 + - - +
178B LEU* 3.5 7.6 - - - +
180B ALA* 1.3 76.7 - - - +
182B LYS* 1.3 62.5 + - - +
183B GLU 3.4 0.2 + - - -
184B ASN* 3.6 17.2 + - - +
185B GLY* 3.7 6.8 + - - -
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Residues in contact with LYS 182 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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76A GLU* 3.4 31.0 + - - +
79A THR* 4.0 9.0 - - - +
82A LEU* 3.4 35.2 - - + -
178B LEU 3.1 12.0 + - - +
179B GLU* 3.0 12.8 + - + +
181B LEU* 1.3 75.3 - - - +
183B GLU* 1.3 66.3 + - - +
185B GLY* 2.9 17.1 + - - +
186B GLY 3.5 3.5 + - - -
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Residues in contact with GLU 183 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
83A ARG* 5.8 2.1 + - - -
179B GLU* 3.0 9.2 + - - +
180B ALA* 2.9 29.3 + - - +
182B LYS* 1.3 76.9 - - - +
184B ASN* 1.3 66.3 + - - +
186B GLY* 3.0 15.4 + - - -
187B ALA* 4.0 3.1 + - - +
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Residues in contact with ASN 184 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
180B ALA 4.0 10.0 - - - +
181B LEU* 3.6 11.0 + - - +
182B LYS 3.3 0.2 - - - -
183B GLU* 1.3 78.5 - - - +
185B GLY* 1.3 52.3 + - - +
186B GLY 3.1 0.2 + - - -
187B ALA* 3.2 7.2 + - - +
188B ARG* 2.7 41.0 + - + +
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Residues in contact with GLY 185 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76A GLU* 5.7 0.2 - - - -
181B LEU 3.7 4.6 + - - -
182B LYS* 2.9 15.1 + - - -
184B ASN* 1.3 79.7 - - - +
186B GLY* 1.3 56.3 + - - +
188B ARG* 3.7 10.1 - - - -
189B LEU* 3.0 41.0 + - - +
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Residues in contact with GLY 186 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72A TRP* 5.8 6.2 - - - -
76A GLU* 4.7 14.3 + - - -
182B LYS 3.5 4.2 + - - -
183B GLU 3.0 11.0 + - - -
185B GLY* 1.3 81.0 - - - +
187B ALA* 1.3 58.2 + - - +
189B LEU* 3.7 15.5 + - - +
190B ALA* 4.0 5.5 + - - +
----------------------------------------------------------
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Residues in contact with ALA 187 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
183B GLU 4.0 3.7 + - - +
184B ASN* 3.2 8.2 + - - +
186B GLY* 1.3 74.4 - - - +
188B ARG* 1.3 62.9 + - - +
189B LEU 3.3 0.7 - - - -
190B ALA* 3.6 5.5 + - - +
191B GLU* 3.2 38.1 + - + +
----------------------------------------------------------
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Residues in contact with ARG 188 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
184B ASN* 2.7 24.2 + - + +
185B GLY* 3.9 6.3 - - - +
187B ALA* 1.3 77.5 - - - +
189B LEU* 1.3 69.9 + - - +
191B GLU* 4.3 9.2 - - + +
192B TYR* 2.7 78.2 + - + +
----------------------------------------------------------
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Residues in contact with LEU 189 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72A TRP* 4.5 25.4 - - + -
75A LEU* 5.7 9.0 - - + -
76A GLU* 5.7 4.7 - - + +
185B GLY* 3.0 27.2 + - - +
186B GLY* 3.8 9.4 - - - +
187B ALA 3.3 0.4 - - - -
188B ARG* 1.3 93.3 - - - +
190B ALA* 1.3 60.7 + - - +
192B TYR* 4.1 6.0 - - + +
193B HIS* 3.1 24.6 + - - +
----------------------------------------------------------
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Residues in contact with ALA 190 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72A TRP* 6.3 3.4 - - + +
186B GLY 4.0 6.3 + - - +
187B ALA* 3.6 8.8 + - - +
188B ARG 3.3 0.4 - - - -
189B LEU* 1.3 77.5 - - - +
191B GLU* 1.3 67.6 + - + +
193B HIS* 3.4 7.5 + - - +
194B ALA* 3.2 21.5 + - - +
----------------------------------------------------------
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Residues in contact with GLU 191 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
187B ALA* 3.2 29.1 + - + +
188B ARG* 4.0 7.1 - - + +
190B ALA* 1.3 77.9 - - + +
192B TYR* 1.3 62.3 + - - +
194B ALA* 3.2 9.3 + - - +
195B LYS* 3.1 39.1 + - + +
----------------------------------------------------------
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Residues in contact with TYR 192 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
188B ARG* 2.7 62.1 + - + +
189B LEU* 4.1 6.1 - - + +
191B GLU* 1.3 72.5 - - - +
193B HIS* 1.3 55.3 + - - +
195B LYS* 2.8 20.4 + - + +
196B ALA* 2.7 52.5 + - + +
----------------------------------------------------------
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Residues in contact with HIS 193 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68A THR* 3.8 32.7 + - + +
240A LEU* 4.8 18.1 - - + +
189B LEU 3.1 18.3 + - - +
190B ALA* 3.5 7.7 + - - +
191B GLU 3.2 0.2 - - - -
192B TYR* 1.3 82.0 - - - +
194B ALA* 1.3 53.4 + - - +
196B ALA* 3.3 6.0 + - + +
197B THR* 2.6 69.8 + - + +
----------------------------------------------------------
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Residues in contact with ALA 194 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
190B ALA 3.2 8.5 + - - +
191B GLU* 3.2 11.7 + - - +
193B HIS* 1.3 81.4 + - - +
195B LYS* 1.3 60.4 + - + +
197B THR* 4.0 4.7 - - - -
198B GLU* 2.8 47.0 + - - +
----------------------------------------------------------
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Residues in contact with LYS 195 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
191B GLU* 3.1 26.3 + - + +
192B TYR* 2.8 22.8 + - + +
194B ALA* 1.3 77.6 - - + +
196B ALA* 1.3 60.8 + - - +
198B GLU* 3.5 6.5 + - - +
199B HIS* 2.9 45.4 + - + +
----------------------------------------------------------
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Residues in contact with ALA 196 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
192B TYR* 2.7 42.3 + - + +
193B HIS* 4.0 5.4 - - + +
195B LYS* 1.3 71.5 - - - +
197B THR* 1.3 64.9 + - - +
199B HIS* 4.1 7.4 - - - -
200B LEU* 3.0 39.1 + - + +
----------------------------------------------------------
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Residues in contact with THR 197 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
240A LEU* 4.5 30.9 - - + +
241A ASN* 5.5 1.3 - - - +
193B HIS* 2.6 58.0 + - + +
194B ALA* 4.0 5.6 - - - -
196B ALA* 1.3 74.9 - - - +
198B GLU* 1.3 55.7 + - + +
200B LEU* 3.6 3.7 + - - +
201B SER* 2.6 39.3 + - - +
----------------------------------------------------------
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Residues in contact with GLU 198 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
194B ALA* 2.8 37.0 + - - +
195B LYS* 4.1 5.7 - - - +
197B THR* 1.3 78.2 - - + +
199B HIS* 1.3 66.4 + - - +
201B SER* 3.2 17.6 + - - -
202B THR* 3.2 19.8 + - + +
----------------------------------------------------------
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Residues in contact with HIS 199 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
195B LYS* 2.9 34.7 + - + +
196B ALA* 3.7 9.0 - - - +
197B THR 3.3 0.2 - - - -
198B GLU* 1.3 76.9 - - - +
200B LEU* 1.3 63.9 + - + +
202B THR* 3.0 21.6 + - - -
203B LEU* 3.2 12.4 + - - +
----------------------------------------------------------
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Residues in contact with LEU 200 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
237A THR* 5.4 8.3 - - + +
196B ALA* 3.0 34.7 + - + +
197B THR* 4.1 3.8 - - - +
199B HIS* 1.3 81.1 - - + +
201B SER* 1.3 59.4 + - - +
203B LEU* 4.3 15.0 - - + -
204B SER* 2.7 46.1 + - - +
----------------------------------------------------------
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Residues in contact with SER 201 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
237A THR* 4.8 12.9 - - - +
241A ASN* 2.9 31.7 + - - +
197B THR* 2.6 27.0 + - - +
198B GLU* 3.2 14.2 + - - -
200B LEU* 1.3 77.9 - - - +
202B THR* 1.3 63.5 + - - +
204B SER* 4.1 2.9 - - - -
205B GLU* 3.2 25.2 + - - +
----------------------------------------------------------
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Residues in contact with THR 202 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
198B GLU* 3.2 11.0 + - + +
199B HIS* 3.0 15.4 + - - -
201B SER* 1.3 74.8 - - - +
203B LEU* 1.3 73.2 + - - +
205B GLU* 3.0 27.5 + - - +
206B LYS* 3.2 24.7 + - - +
----------------------------------------------------------
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Residues in contact with LEU 203 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
199B HIS 3.2 14.7 + - - +
200B LEU* 3.9 14.6 - - + +
202B THR* 1.3 81.2 + - - +
204B SER* 1.3 56.5 + - - +
206B LYS* 3.0 10.0 + - + +
207B ALA* 2.7 40.7 + - + +
----------------------------------------------------------
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Residues in contact with SER 204 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
237A THR* 4.6 20.4 + - - +
200B LEU* 2.7 39.8 + - - +
201B SER 4.1 2.5 - - - -
203B LEU* 1.3 76.3 - - - +
205B GLU* 1.3 61.1 + - - +
207B ALA* 3.6 9.8 - - - +
208B LYS* 2.9 24.4 + - - +
----------------------------------------------------------
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Residues in contact with GLU 205 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
201B SER 3.2 14.6 + - - +
202B THR* 3.0 22.9 + - - +
204B SER* 1.3 78.0 - - - +
206B LYS* 1.3 61.3 + - + +
208B LYS* 3.4 5.6 - - - +
209B PRO* 2.9 22.9 - - - +
----------------------------------------------------------
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Residues in contact with LYS 206 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
202B THR* 3.2 24.0 + - - +
203B LEU* 3.0 9.4 + - + +
205B GLU* 1.3 82.1 - - + +
207B ALA* 1.3 61.5 + - - +
208B LYS 3.1 2.2 - - - -
209B PRO* 3.1 20.4 - - + +
210B ALA* 3.2 18.0 + - - +
----------------------------------------------------------
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Residues in contact with ALA 207 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
203B LEU* 2.7 24.5 + - + +
204B SER* 3.6 11.2 - - - +
206B LYS* 1.3 76.1 - - - +
208B LYS* 1.3 56.8 + - - +
210B ALA* 4.2 6.3 - - - -
211B LEU* 2.7 40.1 + - + +
----------------------------------------------------------
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Residues in contact with LYS 208 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
234A GLU* 4.5 17.0 + - - -
204B SER 2.9 11.7 + - - +
205B GLU* 3.4 8.3 - - - +
207B ALA* 1.3 80.2 - - - +
209B PRO* 1.3 74.7 - - + +
211B LEU* 3.7 7.2 - - + +
212B GLU* 3.3 42.6 + - + +
----------------------------------------------------------
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Residues in contact with PRO 209 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
205B GLU 2.9 22.7 - - - +
206B LYS* 3.1 18.4 - - + +
208B LYS* 1.3 97.4 - - + +
210B ALA* 1.3 59.3 + - - +
212B GLU* 3.7 19.4 + - + +
213B ASP* 3.8 8.3 + - - +
----------------------------------------------------------
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Residues in contact with ALA 210 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
206B LYS 3.2 21.0 + - - +
207B ALA* 4.1 6.5 - - - +
209B PRO* 1.3 76.6 - - - +
211B LEU* 1.3 60.5 + - - +
213B ASP* 3.6 4.2 + - - +
214B LEU* 2.9 32.0 + - + +
----------------------------------------------------------
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Residues in contact with LEU 211 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
230A LEU* 4.7 22.2 - - + -
207B ALA* 2.7 22.1 + - + +
208B LYS* 3.7 8.3 - - + +
209B PRO 3.3 0.2 - - - -
210B ALA* 1.3 76.2 - - - +
212B GLU* 1.3 74.4 + - + +
214B LEU* 3.8 9.9 - - + -
215B ARG* 2.9 61.0 + - + +
----------------------------------------------------------
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Residues in contact with GLU 212 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
208B LYS* 3.3 43.7 + - + +
209B PRO* 3.8 11.2 - - + +
210B ALA 3.3 0.6 - - - -
211B LEU* 1.3 86.9 - - + +
213B ASP* 1.3 59.8 + - - +
215B ARG* 4.3 2.4 - - - +
216B GLN* 3.0 29.1 + - - +
----------------------------------------------------------
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Residues in contact with ASP 213 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
209B PRO 3.8 8.1 + - - +
210B ALA* 3.6 7.0 + - - +
211B LEU 3.3 0.4 - - - -
212B GLU* 1.3 77.2 - - + +
214B LEU* 1.3 66.4 + - - +
216B GLN* 3.5 8.4 - - - +
217B GLY* 3.1 21.1 + - - -
----------------------------------------------------------
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Residues in contact with LEU 214 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
210B ALA* 2.9 21.6 + - + +
211B LEU* 3.4 10.1 - - + +
213B ASP* 1.3 79.6 + - - +
215B ARG* 1.3 96.9 + - - +
217B GLY* 3.5 1.0 + - - -
218B LEU* 3.2 38.5 + - + +
----------------------------------------------------------
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Residues in contact with ARG 215 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
226A LYS* 5.3 22.4 - - + +
230A LEU* 5.8 4.9 - - - +
211B LEU* 2.9 50.8 + - + +
212B GLU* 4.3 2.7 - - - +
214B LEU* 1.3 96.5 - - - +
216B GLN* 1.3 66.2 + - - +
218B LEU* 3.1 28.8 + - + +
219B LEU* 3.2 23.4 + - + +
----------------------------------------------------------
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Residues in contact with GLN 216 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
212B GLU 3.0 25.2 + - - +
213B ASP* 3.5 13.0 - - - +
215B ARG* 1.3 80.5 - - - +
217B GLY* 1.3 58.2 + - - +
219B LEU* 3.3 11.0 - - - +
220B PRO* 2.8 23.6 - - - +
----------------------------------------------------------
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Residues in contact with GLY 217 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
213B ASP 3.1 14.9 + - - -
214B LEU 4.0 1.6 - - - -
216B GLN* 1.3 75.1 - - - +
218B LEU* 1.3 59.2 + - - +
220B PRO* 2.9 19.4 - - - +
221B VAL* 2.9 30.0 + - - +
----------------------------------------------------------
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Residues in contact with LEU 218 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
214B LEU* 3.2 41.1 + - + +
215B ARG* 3.1 28.4 + - + +
217B GLY* 1.3 75.3 - - - +
219B LEU* 1.3 60.8 + - + +
221B VAL* 4.1 13.7 - - + -
222B LEU* 2.7 48.4 + - + +
----------------------------------------------------------
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Residues in contact with LEU 219 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
219A LEU* 4.8 22.2 - - + -
215B ARG* 3.2 24.2 + - + +
216B GLN* 3.3 11.7 - - - +
218B LEU* 1.3 81.1 - - + +
220B PRO* 1.3 70.1 - - + +
222B LEU* 4.2 2.4 - - - +
223B GLU* 3.2 36.2 + - + +
----------------------------------------------------------
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Residues in contact with PRO 220 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
216B GLN 2.8 27.4 - - - +
217B GLY* 2.9 22.9 - - - +
219B LEU* 1.3 80.8 - - + +
221B VAL* 1.3 65.4 + - + +
223B GLU* 3.1 13.0 + - + +
224B SER* 2.9 24.7 + - - -
----------------------------------------------------------
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Residues in contact with VAL 221 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
217B GLY* 2.9 31.9 + - - +
218B LEU* 4.0 14.1 - - + +
220B PRO* 1.3 79.0 - - + +
222B LEU* 1.3 64.6 + - - +
224B SER* 3.0 22.3 + - - -
225B PHE* 3.4 19.5 + - + -
----------------------------------------------------------
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Residues in contact with LEU 222 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
218B LEU* 2.7 35.8 + - + +
219B LEU* 4.2 2.9 - - - +
221B VAL* 1.3 76.0 - - - +
223B GLU* 1.3 62.6 + - + +
225B PHE* 3.5 7.7 + - + +
226B LYS* 3.2 54.9 + - + +
----------------------------------------------------------
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Residues in contact with GLU 223 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
219B LEU* 3.2 31.5 + - + +
220B PRO* 3.1 12.8 + - + +
221B VAL 3.1 0.4 - - - -
222B LEU* 1.3 78.7 - - + +
224B SER* 1.3 55.1 + - - +
226B LYS* 3.7 8.9 - - + +
227B VAL* 2.7 48.2 + - + +
----------------------------------------------------------
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Residues in contact with SER 224 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
220B PRO 2.9 12.9 + - - -
221B VAL* 3.2 13.5 - - - -
223B GLU* 1.3 77.9 - - - +
225B PHE* 1.3 63.5 + - - +
227B VAL* 3.5 6.9 + - - +
228B SER* 3.2 22.3 + - - -
----------------------------------------------------------
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Residues in contact with PHE 225 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
221B VAL* 3.4 20.4 + - + +
222B LEU* 3.9 9.6 - - - +
223B GLU 3.3 0.4 - - - -
224B SER* 1.3 79.9 - - - +
226B LYS* 1.3 62.9 + - - +
228B SER* 3.4 10.1 + - - -
229B PHE* 3.3 19.8 + - - +
----------------------------------------------------------
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Residues in contact with LYS 226 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
215A ARG* 5.3 23.0 - - + +
222B LEU* 3.2 42.7 + - + +
223B GLU* 3.7 8.7 - - + +
225B PHE* 1.3 77.3 - - - +
227B VAL* 1.3 61.0 + - + +
229B PHE* 3.1 6.1 + - - +
230B LEU* 2.8 47.0 + - + +
----------------------------------------------------------
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Residues in contact with VAL 227 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
223B GLU* 2.7 39.6 + - + +
224B SER* 3.7 7.6 - - - +
225B PHE 3.3 0.2 - - - -
226B LYS* 1.3 72.6 - - + +
228B SER* 1.3 59.4 + - - +
230B LEU* 3.2 8.0 + - - +
231B SER* 2.9 42.4 + - - +
----------------------------------------------------------
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Residues in contact with SER 228 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
224B SER 3.2 10.5 + - - -
225B PHE* 3.5 13.9 - - - -
226B LYS 3.2 0.6 - - - -
227B VAL* 1.3 80.2 - - - +
229B PHE* 1.3 61.7 + - - +
231B SER* 3.2 8.0 + - - -
232B ALA* 3.2 20.8 + - - +
----------------------------------------------------------
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Residues in contact with PHE 229 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
225B PHE 3.3 8.3 + - - +
226B LYS* 3.1 9.9 + - + +
228B SER* 1.3 78.6 - - - +
230B LEU* 1.3 67.7 + - + +
232B ALA* 3.2 20.0 + - + +
233B LEU* 3.1 33.2 + - + +
----------------------------------------------------------
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Residues in contact with LEU 230 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
211A LEU* 4.7 24.5 - - + -
215A ARG* 5.8 4.5 - - - +
226B LYS* 2.8 39.1 + - + +
227B VAL* 3.6 8.5 - - - +
229B PHE* 1.3 84.6 - - + +
231B SER* 1.3 57.9 + - - +
233B LEU* 3.2 32.8 - - + +
234B GLU* 3.0 31.8 + - + +
----------------------------------------------------------
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Residues in contact with SER 231 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
227B VAL* 2.9 28.5 + - - +
228B SER* 3.5 7.6 - - - -
229B PHE 3.2 0.2 - - - -
230B LEU* 1.3 75.1 - - - +
232B ALA* 1.3 57.7 + - - +
234B GLU* 4.3 7.8 - - - +
235B GLU* 2.8 40.7 + - - +
----------------------------------------------------------
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Residues in contact with ALA 232 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
228B SER 3.2 11.3 + - - +
229B PHE* 3.2 19.2 + - + +
231B SER* 1.3 75.5 - - - +
233B LEU* 1.3 59.4 + - - +
235B GLU* 3.4 3.5 + - - -
236B TYR* 2.9 46.6 + - + -
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Residues in contact with LEU 233 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
229B PHE* 3.1 38.1 + - + +
230B LEU* 3.2 41.5 - - + +
232B ALA* 1.3 79.2 - - - +
234B GLU* 1.3 71.4 + - + +
236B TYR* 4.2 4.3 - - - +
237B THR* 2.6 38.7 + - - +
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Residues in contact with GLU 234 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
208A LYS* 4.5 18.2 + - - -
230B LEU* 3.0 21.9 + - + +
231B SER* 4.0 6.4 - - - +
233B LEU* 1.3 83.3 - - + +
235B GLU* 1.3 60.6 + - - +
237B THR* 3.9 3.4 - - - -
238B LYS* 3.0 54.1 + - - +
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Residues in contact with GLU 235 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
231B SER* 2.8 25.3 + - - +
232B ALA* 3.8 4.0 - - - +
234B GLU* 1.3 77.1 + - - +
236B TYR* 1.3 75.4 + - + +
238B LYS* 3.3 4.7 + - - +
239B LYS* 3.0 51.9 + - + +
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Residues in contact with TYR 236 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
232B ALA* 2.9 34.3 + - + +
233B LEU* 4.2 4.9 - - - +
235B GLU* 1.3 88.4 - - + +
237B THR* 1.3 58.3 + - - +
239B LYS* 4.2 3.3 - - - +
240B LEU* 2.9 51.2 + - + +
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Residues in contact with THR 237 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
200A LEU* 5.1 7.6 - - + +
201A SER* 4.9 16.6 - - - +
204A SER* 4.6 23.5 + - - +
233B LEU* 2.6 24.9 + - - +
234B GLU* 3.9 4.5 - - - -
236B TYR* 1.3 76.6 - - - +
238B LYS* 1.3 56.6 + - - +
240B LEU* 3.7 6.9 - - - +
241B ASN* 2.7 41.5 + - + +
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Residues in contact with LYS 238 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63B GLN* 5.1 1.0 + - - -
234B GLU* 3.0 45.7 + - - +
235B GLU* 3.7 6.5 - - - +
237B THR* 1.3 77.6 - - - +
239B LYS* 1.3 75.4 + - + +
241B ASN* 3.2 6.6 + - - +
242B THR* 3.1 19.6 + - - +
243B GLN 4.2 8.5 - - - +
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Residues in contact with LYS 239 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62B GLU 6.1 0.2 - - - +
63B GLN* 2.7 51.6 - - - +
235B GLU* 3.0 40.8 + - + +
236B TYR* 4.2 3.8 - - - +
238B LYS* 1.3 87.6 - - + +
240B LEU* 1.3 56.9 + - + +
242B THR* 2.9 14.6 + - - -
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Residues in contact with LEU 240 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
193A HIS* 4.8 20.0 - - + +
197A THR* 4.5 22.0 - - + +
63B GLN 4.4 2.2 - - - -
64B LEU* 4.5 15.8 - - - +
65B GLY* 5.5 5.8 - - - +
67B VAL* 6.1 4.3 - - + -
68B THR* 6.3 2.0 - - - -
236B TYR* 2.9 43.3 + - + +
237B THR* 3.7 6.3 - - - +
239B LYS* 1.3 77.4 - - + +
241B ASN* 1.3 61.3 + - - +
242B THR* 3.4 7.6 + - - -
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il