Contacts of the helix formed by residues 108 - 182 (chain B) in PDB entry 2WCD
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with LYS 108 (chain B).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
100B LEU* 4.0 13.8 - - + +
101B PHE* 3.9 8.1 - - + -
105B ASN* 3.1 34.9 + - - +
107B LYS* 1.3 80.2 - - + +
109B ALA* 1.3 64.9 + - - +
110B SER 3.3 0.7 - - - -
111B ALA* 3.1 8.8 + - - +
112B GLN* 2.8 24.3 + - - +
266C TYR* 3.9 36.8 - - + +
268C ASP* 3.3 42.5 + - - -
271C LEU* 3.8 14.4 - - - +
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Residues in contact with ALA 109 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
101B PHE* 3.5 13.9 - - + -
104B TYR* 3.0 33.7 - - + +
105B ASN 3.0 15.5 + - - +
106B GLU 3.5 11.0 - - - +
107B LYS 3.0 1.4 - - - -
108B LYS* 1.3 77.8 - - - +
110B SER* 1.3 62.8 + - - +
113B LYS* 3.2 11.8 + - - +
269B LEU* 3.2 21.0 - - + +
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Residues in contact with SER 110 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106B GLU 4.8 0.8 + - - -
107B LYS 3.9 11.0 + - - -
109B ALA* 1.3 75.3 - - - +
111B ALA* 1.3 69.6 + - - +
113B LYS* 3.4 7.4 + - - +
114B ASP* 3.2 27.0 + - - +
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Residues in contact with ALA 111 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
107B LYS 5.5 0.2 - - - +
108B LYS* 3.1 8.6 + - - +
110B SER* 1.3 78.3 + - - +
112B GLN* 1.3 68.5 + - - +
113B LYS 2.9 1.6 - - - -
114B ASP* 2.7 12.2 + - - +
115B ILE* 2.7 26.8 + - + +
265C ASP 3.3 27.1 - - - +
266C TYR* 4.1 20.0 - - + +
267C ASP* 5.5 1.3 - - - +
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Residues in contact with GLN 112 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93B LEU 4.9 2.2 + - - -
96B ALA 4.4 0.3 - - - +
97B TYR* 3.1 50.8 - - + +
100B LEU* 4.5 0.3 - - - +
101B PHE* 3.6 27.8 - - + -
108B LYS 2.8 19.9 + - - +
109B ALA 3.7 2.2 - - - +
111B ALA* 1.3 72.4 - - - +
113B LYS* 1.3 52.4 + - - +
115B ILE* 3.4 14.2 + - - +
116B LEU* 2.8 40.2 + - + +
269B LEU* 3.7 7.9 - - + -
266C TYR* 2.4 40.6 + - + -
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Residues in contact with LYS 113 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109B ALA 3.2 10.5 + - - +
110B SER* 3.5 11.4 - - - +
111B ALA 2.8 1.0 + - - -
112B GLN* 1.3 76.8 - - - +
114B ASP* 1.3 74.9 + - - +
116B LEU* 3.2 6.0 + - - +
117B ILE* 3.0 46.7 + - + +
264B VAL* 4.2 20.6 + - + +
265B ASP* 5.8 2.0 + - - +
267B ASP* 3.3 35.2 + - - +
269B LEU* 4.2 19.5 - - + +
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Residues in contact with ASP 114 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
110B SER* 3.2 13.9 + - - +
111B ALA* 2.7 15.0 + - - +
113B LYS* 1.3 87.5 - - - +
115B ILE* 1.3 63.0 + - + +
117B ILE* 3.2 12.1 + - - +
118B LYS* 3.0 22.7 + - - +
265C ASP* 5.9 2.9 - - - +
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Residues in contact with ILE 115 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93B LEU* 3.9 33.4 - - + -
111B ALA 2.7 18.1 + - - +
112B GLN* 3.6 15.9 - - - +
114B ASP* 1.3 69.8 - - + +
116B LEU* 1.3 70.7 + - + +
117B ILE 2.8 1.6 + - - -
118B LYS* 2.9 15.7 + - - +
119B VAL* 3.0 13.6 + - + +
262C PHE* 3.6 27.1 - - + +
265C ASP* 3.8 28.0 - - + +
266C TYR* 3.8 39.3 - - + +
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Residues in contact with LEU 116 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93B LEU* 5.2 2.2 - - + +
94B LEU* 4.0 28.0 - - + +
97B TYR* 4.0 28.0 - - + -
112B GLN* 2.8 34.6 + - - +
113B LYS 3.2 5.6 + - - +
115B ILE* 1.3 73.8 - - + +
117B ILE* 1.3 60.4 + - - +
119B VAL* 3.4 8.7 - - + +
120B LEU* 3.0 36.4 + - + +
260B THR* 6.1 1.3 - - + -
264B VAL* 3.5 28.9 - - + -
269B LEU* 4.2 6.5 - - + -
274B LEU* 3.9 20.4 - - + -
278B ALA* 6.1 0.2 - - + -
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Residues in contact with ILE 117 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113B LYS* 3.0 41.2 + - + +
114B ASP* 3.3 12.8 - - - +
115B ILE 2.8 1.6 + - - -
116B LEU* 1.3 74.0 - - - +
118B LYS* 1.3 59.0 + - - +
120B LEU 3.2 0.7 + - - -
121B ASP* 2.6 49.7 + - - +
261B ARG* 3.2 39.0 - - - +
264B VAL* 3.6 19.1 - - + -
265B ASP* 5.0 2.7 - - - +
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Residues in contact with LYS 118 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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114B ASP 3.0 11.9 + - - +
115B ILE* 2.9 13.1 + - - +
117B ILE* 1.3 73.5 - - - +
119B VAL* 1.3 56.1 + - - +
121B ASP* 3.6 4.3 - - - +
122B ASP* 2.7 41.3 + - + +
121C ASP* 5.5 1.6 + - - -
261C ARG* 4.3 29.5 - - - +
262C PHE* 3.9 33.3 - - + -
265C ASP* 4.4 12.8 + - - +
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Residues in contact with VAL 119 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86B TRP* 2.9 40.1 + - + +
89B VAL* 4.6 3.1 - - + -
90B ALA* 3.9 28.0 - - + +
93B LEU* 3.9 20.6 - - + -
94B LEU* 5.4 2.5 - - + -
115B ILE 3.0 11.0 + - - +
116B LEU* 3.4 24.5 - - + +
118B LYS* 1.3 77.4 - - - +
120B LEU* 1.3 76.5 + - + +
122B ASP* 4.4 2.2 - - - -
123B GLY 3.1 4.9 + - - -
262C PHE* 3.6 24.7 - - + -
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Residues in contact with LEU 120 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86B TRP* 4.7 2.7 - - + -
94B LEU* 4.6 10.1 - - + -
116B LEU* 3.0 27.6 + - + +
117B ILE 3.7 0.7 - - - +
119B VAL* 1.3 90.9 - - + +
121B ASP* 1.3 68.7 + - - +
122B ASP 3.1 0.3 + - - -
123B GLY* 3.3 0.7 + - - -
124B ILE* 2.9 29.3 + - - +
257B THR* 3.8 13.3 - - + +
260B THR* 3.6 19.7 - - + +
261B ARG* 3.2 46.9 - - + +
264B VAL* 4.8 5.6 - - + -
281B MET* 3.9 26.9 - - + -
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Residues in contact with ASP 121 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
118A LYS* 5.6 1.6 + - - -
117B ILE* 2.6 39.0 + - - +
118B LYS* 3.6 4.7 - - - +
120B LEU* 1.3 73.2 - - - +
122B ASP* 1.3 63.1 + - - +
124B ILE* 3.3 10.9 - - - +
125B THR* 3.2 21.8 + - - -
261B ARG* 3.1 31.1 + - - +
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Residues in contact with ASP 122 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86B TRP* 4.1 5.9 - - - +
118B LYS* 2.7 28.4 + - + +
119B VAL* 3.7 6.1 - - - +
121B ASP* 1.3 69.7 - - - +
123B GLY* 1.3 66.9 + - - +
125B THR* 2.8 17.9 + - - -
126B LYS* 2.9 47.9 + - - +
258C GLU* 3.7 10.0 - - - +
262C PHE* 5.1 6.8 - - + -
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Residues in contact with GLY 123 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86B TRP* 3.0 47.6 - - - +
119B VAL 3.1 2.4 + - - -
122B ASP* 1.3 77.6 - - - +
124B ILE* 1.3 54.8 + - - +
126B LYS* 4.1 4.5 - - - -
127B LEU* 2.5 43.1 + - - +
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Residues in contact with ILE 124 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120B LEU 2.9 26.2 + - - +
121B ASP* 3.3 13.0 - - - +
123B GLY* 1.3 75.5 - - - +
125B THR* 1.3 63.6 + - - +
127B LEU* 3.9 5.5 - - - +
128B ASN* 3.2 21.5 + - + +
254B LYS* 4.4 12.1 - - + +
257B THR* 3.4 18.5 - - + +
258B GLU* 3.4 48.0 - - + +
261B ARG* 4.1 19.3 - - + -
262B PHE* 6.2 0.2 - - + -
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Residues in contact with THR 125 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
121B ASP 3.2 9.1 + - - -
122B ASP* 2.8 13.0 + - - -
124B ILE* 1.3 77.2 - - - +
126B LYS* 1.3 69.9 + - + +
128B ASN* 3.0 17.1 + - + +
129B GLU* 3.0 30.9 + - + +
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Residues in contact with LYS 126 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82B THR* 4.4 28.1 + - + +
83B VAL* 6.3 0.2 - - - -
85B GLU* 5.6 3.8 + - - +
86B TRP* 4.1 28.4 - - + +
122B ASP* 2.9 36.9 + - - +
123B GLY* 3.7 7.9 - - - +
125B THR* 1.3 80.0 - - + +
127B LEU* 1.3 64.6 + - + +
129B GLU* 3.4 10.0 + - - +
130B ALA* 3.1 21.7 + - - +
254C LYS* 5.4 7.3 - - - +
258C GLU* 3.1 32.9 + - - -
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Residues in contact with LEU 127 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
83B VAL* 3.5 41.7 - - + -
86B TRP* 4.2 16.8 - - + -
123B GLY 2.5 28.5 + - - +
124B ILE* 3.9 4.5 - - - +
126B LYS* 1.3 73.9 - - + +
128B ASN* 1.3 64.5 + - - +
130B ALA* 3.3 16.7 + - - +
131B GLN* 3.3 13.1 + - - +
250B ILE* 3.9 13.3 - - + +
253B ILE* 3.6 22.2 - - + -
254B LYS* 3.5 40.6 - - + +
257B THR* 4.3 4.0 - - - +
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Residues in contact with ASN 128 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
124B ILE* 3.2 12.9 + - - +
125B THR* 3.0 11.3 + - + +
127B LEU* 1.3 78.6 - - - +
129B GLU* 1.3 63.4 + - + +
131B GLN* 2.9 19.2 + - - +
132B LYS* 3.1 34.7 + - - +
254B LYS* 2.7 36.0 + - - +
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Residues in contact with GLU 129 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
125B THR* 3.0 28.2 + - + +
126B LYS* 3.8 11.3 - - - +
128B ASN* 1.3 75.5 - - + +
130B ALA* 1.3 62.8 + - - +
132B LYS* 3.3 24.3 + - - +
133B SER* 2.8 26.0 + - - -
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Residues in contact with ALA 130 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
79B ALA* 4.0 17.8 - - + +
82B THR* 5.3 4.5 - - + -
83B VAL* 4.0 25.1 - - + -
126B LYS 3.1 12.0 + - - +
127B LEU 3.3 11.0 - - - +
129B GLU* 1.3 75.9 - - - +
131B GLN* 1.3 64.6 + - - +
133B SER* 3.3 5.6 + - - -
134B LEU* 2.9 28.6 + - - +
250B ILE* 4.0 10.8 - - + -
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Residues in contact with GLN 131 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81A GLN* 5.1 0.2 - - - -
85A GLU* 2.8 27.3 + - - +
127B LEU 3.5 11.9 - - - +
128B ASN* 2.9 9.1 + - - +
130B ALA* 1.3 80.1 - - - +
132B LYS* 1.3 59.0 + - + +
134B LEU* 3.0 10.3 + - - +
135B LEU* 2.8 30.7 + - - +
247B ILE* 2.9 44.2 + - + +
250B ILE* 3.9 10.0 - - + -
251B GLY* 3.2 14.6 - - - +
254B LYS* 3.2 32.6 + - - +
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Residues in contact with LYS 132 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
78A GLU* 5.9 3.1 - - - +
128B ASN* 3.1 37.8 + - - +
129B GLU* 3.8 24.9 - - - +
131B GLN* 1.3 78.1 - - + +
133B SER* 1.3 64.7 + - - +
135B LEU* 3.2 10.4 + - + +
136B VAL* 2.9 25.9 + - - +
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Residues in contact with SER 133 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75B LYS* 3.6 30.1 + - - +
78B GLU* 3.7 14.6 + - - -
79B ALA* 5.0 5.6 - - - -
129B GLU 2.8 17.7 + - - -
130B ALA* 3.4 8.1 - - - -
132B LYS* 1.3 76.4 - - - +
134B LEU* 1.3 63.0 + - - +
136B VAL* 3.2 25.6 - - - +
137B SER* 3.2 7.4 + - - -
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Residues in contact with LEU 134 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75B LYS 4.1 3.6 - - - +
76B TYR* 3.8 18.8 - - + +
79B ALA* 3.7 20.4 - - + -
130B ALA 2.9 16.9 + - - +
131B GLN 3.4 6.5 - - - +
133B SER* 1.3 73.9 - - - +
135B LEU* 1.3 64.2 + - - +
137B SER* 3.1 7.7 + - - -
138B SER* 3.0 21.3 + - - -
243B LEU* 3.4 29.5 - - + +
246B GLU* 3.5 31.4 - - + -
247B ILE* 3.4 25.1 - - + +
250B ILE* 3.9 16.6 - - + -
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Residues in contact with LEU 135 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
74A ASP* 4.3 20.0 - - + +
77A PHE* 4.1 23.8 - - + -
78A GLU* 3.2 46.4 - - + +
131B GLN 2.8 19.7 + - - +
132B LYS* 3.6 11.7 - - + +
134B LEU* 1.3 71.5 - - - +
136B VAL* 1.3 63.7 + - - +
138B SER* 3.1 8.9 + - - -
139B GLN* 3.0 41.4 + - - +
244B THR* 5.8 0.7 - - + -
247B ILE* 3.4 15.3 - - + +
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Residues in contact with VAL 136 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75B LYS* 4.5 15.5 - - + -
132B LYS 2.9 13.0 + - - +
133B SER* 3.2 16.6 - - - +
135B LEU* 1.3 74.8 - - - +
137B SER* 1.3 71.0 + - - +
139B GLN* 3.2 21.5 + - + +
140B SER* 3.1 19.8 + - - -
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Residues in contact with SER 137 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72B SER* 3.2 38.5 + - - -
75B LYS* 4.3 15.3 - - - +
133B SER 3.2 8.7 + - - -
134B LEU* 3.1 13.5 + - - -
136B VAL* 1.3 83.0 - - - +
138B SER* 1.3 62.9 + - - +
140B SER* 2.6 30.3 + - - -
141B PHE* 3.6 4.9 - - - -
243B LEU* 3.7 9.6 - - - -
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Residues in contact with SER 138 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
74A ASP* 3.1 12.5 + - - -
134B LEU 3.0 12.4 + - - -
135B LEU* 3.1 13.9 + - - -
137B SER* 1.3 77.8 - - - +
139B GLN* 1.3 62.1 + - - +
140B SER 3.0 1.4 + - - -
141B PHE* 3.5 11.6 + - - -
142B ASN* 3.8 0.9 - - - +
240B LYS* 3.0 51.0 + - - +
243B LEU* 3.4 20.3 - - - +
244B THR* 4.1 8.3 - - - +
247B ILE* 5.4 0.2 - - - -
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Residues in contact with GLN 139 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71A ASP* 4.6 5.9 - - - +
74A ASP* 3.6 22.6 - - + +
75A LYS* 4.0 27.8 - - - +
78A GLU* 5.0 3.2 + - - -
135B LEU* 3.0 36.9 + - - +
136B VAL* 3.2 28.3 + - + +
138B SER* 1.3 76.9 - - - +
140B SER* 1.3 63.1 + - - +
142B ASN* 3.2 26.5 + - - +
143B ASN 4.6 0.5 + - - -
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Residues in contact with SER 140 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68B LEU* 3.6 23.9 + - - +
71B ASP* 6.1 0.7 - - - +
72B SER* 5.6 0.3 - - - -
136B VAL 3.1 9.6 + - - -
137B SER* 2.6 24.6 + - - -
138B SER 3.0 0.6 - - - -
139B GLN* 1.3 78.6 - - - +
141B PHE* 1.3 81.4 + - - +
142B ASN 3.1 1.4 + - - -
143B ASN* 3.9 9.7 + - - +
144B ALA 4.6 1.4 + - - -
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Residues in contact with PHE 141 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65B ILE* 4.4 1.1 - - + -
68B LEU* 3.5 33.4 - - + -
69B LEU* 3.2 52.0 - - + -
72B SER* 3.7 20.4 - - - -
137B SER 3.6 9.9 - - - -
138B SER 3.9 9.0 - - - +
139B GLN 3.4 0.6 - - - -
140B SER* 1.3 89.1 + - - +
142B ASN* 1.3 58.7 + - - +
143B ASN 3.3 0.4 + - - -
144B ALA* 3.4 3.7 + - - +
145B SER* 2.8 30.4 + - - -
236B ILE* 3.4 38.2 - - + +
239B ALA* 4.1 11.2 - - + -
240B LYS* 4.2 13.7 - - + -
243B LEU* 4.4 4.3 - - + -
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Residues in contact with ASN 142 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67A THR* 2.8 20.4 + - + +
70A MET* 3.0 26.6 + - + +
71A ASP* 2.8 49.3 + - - +
74A ASP* 3.9 6.9 + - - +
139B GLN* 3.3 18.8 + - - +
140B SER 3.1 1.6 - - - -
141B PHE* 1.3 77.3 - - - +
143B ASN* 1.3 62.9 + - - +
145B SER* 3.2 4.0 + - - -
146B GLY 3.2 11.1 + - - -
240B LYS* 2.7 30.8 + - - +
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Residues in contact with ASN 143 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67A THR* 3.3 19.7 + - + +
139B GLN 4.6 0.4 + - - -
140B SER 3.9 7.0 + - - +
141B PHE 3.4 0.6 - - - -
142B ASN* 1.3 77.4 - - - +
144B ALA* 1.3 67.2 + - - +
146B GLY 2.9 12.1 + - - -
147B LYS* 3.1 43.3 + - - +
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Residues in contact with ALA 144 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61B LEU* 4.6 3.4 - - + +
64B ASP* 6.1 2.5 - - + -
65B ILE* 3.4 29.9 - - + +
68B LEU* 4.0 21.3 - - + -
140B SER 4.6 1.0 + - - -
141B PHE 3.4 8.0 + - - +
143B ASN* 1.3 80.7 - - - +
145B SER* 1.3 58.1 + - - +
146B GLY 3.1 0.2 + - - -
147B LYS* 3.1 13.0 + - - +
148B LEU* 2.8 31.2 + - - +
236B ILE* 4.7 2.0 - - + -
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Residues in contact with SER 145 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
66A LYS* 3.9 16.4 + - - +
70A MET* 3.4 33.9 - - - +
141B PHE 2.8 20.6 + - - -
142B ASN 3.4 6.1 - - - -
143B ASN 3.2 0.2 - - - -
144B ALA* 1.3 72.9 - - - +
146B GLY* 1.3 63.1 + - - +
148B LEU* 3.4 15.4 - - - +
149B LEU 3.4 4.2 + - - -
233B ASN* 3.6 14.4 + - - +
236B ILE* 4.2 20.7 - - - +
237B ASP* 4.3 3.3 + - - -
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Residues in contact with GLY 146 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63A GLY* 3.7 29.1 - - - -
66A LYS* 4.6 6.0 - - - +
67A THR* 3.8 9.2 - - - +
142B ASN 3.2 5.7 + - - -
143B ASN 2.9 8.5 + - - -
145B SER* 1.3 72.9 - - - +
147B LYS* 1.3 65.0 + - - -
148B LEU 3.0 1.3 - - - -
149B LEU* 2.8 15.1 + - - +
150B ALA* 3.0 12.4 + - - +
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Residues in contact with LYS 147 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61B LEU* 3.6 25.9 - - + +
143B ASN* 3.1 40.4 + - - +
144B ALA* 3.5 10.5 - - - +
146B GLY* 1.3 72.6 - - - +
148B LEU* 1.3 62.1 + - - +
150B ALA* 3.4 8.8 + - - +
151B LEU* 3.0 23.9 + - - +
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Residues in contact with LEU 148 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61B LEU* 3.4 27.1 - - + +
62B VAL* 5.5 4.0 - - + -
65B ILE* 4.1 6.1 - - + -
144B ALA 2.8 9.8 + - - +
145B SER* 3.4 10.8 - - - +
146B GLY 3.0 0.2 + - - -
147B LYS* 1.3 78.1 - - - +
149B LEU* 1.3 63.2 + - - +
151B LEU* 3.3 3.7 + - + +
152B ASP* 3.1 21.5 + - - +
229B VAL* 3.7 34.8 - - + +
232B ALA* 3.6 31.2 - - + -
233B ASN* 3.9 24.7 - - - +
236B ILE* 3.9 22.0 - - + -
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Residues in contact with LEU 149 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59A SER 4.5 0.4 - - - +
62A VAL* 3.3 35.2 - - + +
63A GLY* 3.6 17.0 - - - +
66A LYS* 4.4 26.0 - - + +
145B SER 3.4 7.9 + - - +
146B GLY 2.8 11.6 + - - +
148B LEU* 1.3 71.8 - - - +
150B ALA* 1.3 60.6 + - - +
152B ASP* 3.2 6.7 + - + +
153B SER* 2.6 43.3 + - - -
233B ASN* 4.7 5.3 - - - +
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Residues in contact with ALA 150 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59A SER* 3.8 30.6 + - - +
60A VAL* 4.4 10.8 - - + +
63A GLY* 4.8 3.1 - - - -
146B GLY 3.0 10.9 + - - +
147B LYS* 3.5 13.2 - - - +
149B LEU* 1.3 78.6 - - - +
151B LEU* 1.3 65.5 + - - +
153B SER* 3.2 3.3 + - - -
154B GLN* 2.9 27.1 + - - +
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Residues in contact with LEU 151 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54B TYR* 4.3 18.2 - - + -
57B ALA* 3.6 32.1 - - + -
58B ALA* 4.1 24.5 - - + +
61B LEU* 4.9 11.9 - - + -
147B LYS 3.0 10.6 + - - +
148B LEU* 3.3 9.9 - - - +
150B ALA* 1.3 78.8 - - - +
152B ASP* 1.3 53.7 + - - +
154B GLN* 3.6 3.5 - - - +
155B LEU* 2.8 36.2 + - + +
225B LEU* 4.2 9.6 - - + -
229B VAL* 3.8 28.5 - - + -
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Residues in contact with ASP 152 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
148B LEU 3.1 8.7 + - - +
149B LEU* 3.7 9.4 - - + +
151B LEU* 1.3 78.5 - - - +
153B SER* 1.3 71.6 + - - +
154B GLN 3.0 0.2 + - - -
155B LEU* 4.4 9.4 - - - -
156B THR* 2.9 35.9 + - - -
226B SER* 3.5 21.6 + - - +
229B VAL* 3.9 26.7 - - + +
230B LYS* 5.2 4.2 - - - +
----------------------------------------------------------
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Residues in contact with SER 153 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59A SER* 3.4 20.1 + - - -
62A VAL* 5.0 5.4 - - - +
149B LEU* 2.6 32.6 + - - +
150B ALA* 3.3 7.4 - - - -
152B ASP* 1.3 77.1 + - - +
154B GLN* 1.3 60.8 + - - +
156B THR* 3.7 4.5 - - - +
157B ASN* 3.3 19.6 + - - +
----------------------------------------------------------
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Residues in contact with GLN 154 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52A GLN* 4.6 8.7 - - - +
55A SER* 3.8 13.8 + - - +
56A GLN* 3.4 53.1 + - - +
59A SER* 3.5 19.0 - - - +
54B TYR* 3.4 17.3 - - + +
150B ALA* 2.9 15.3 + - - +
151B LEU* 3.7 3.1 - - - +
153B SER* 1.3 73.4 - - - +
155B LEU* 1.3 55.2 + - - +
156B THR 2.9 4.3 - - - -
157B ASN 2.8 2.4 + - - -
158B ASP* 2.5 48.1 + - - +
----------------------------------------------------------
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Residues in contact with LEU 155 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
50B PHE* 4.4 5.5 - - + -
54B TYR* 3.1 40.1 - - + -
151B LEU* 2.8 18.0 + - + +
152B ASP* 4.1 12.6 - - - +
154B GLN* 1.3 72.2 - - - +
156B THR* 1.3 60.4 + - - +
158B ASP* 4.0 1.3 - - - +
159B PHE* 3.1 27.0 + - - +
221B PHE* 4.9 2.5 - - + -
222B PHE* 3.6 33.3 - - + +
225B LEU* 3.4 48.0 - - + -
226B SER* 4.4 13.2 - - - +
----------------------------------------------------------
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Residues in contact with THR 156 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
152B ASP* 2.9 31.0 + - - -
153B SER* 3.7 5.2 - - - +
154B GLN 2.8 1.8 + - - -
155B LEU* 1.3 76.7 - - - +
157B ASN* 1.3 67.6 + - - +
159B PHE* 3.3 13.2 + - - +
160B SER* 3.5 11.6 + - - -
222B PHE* 3.7 22.4 - - + -
226B SER* 4.9 2.4 + - - -
----------------------------------------------------------
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Residues in contact with ASN 157 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51A LYS* 4.2 17.0 + - - +
52A GLN* 4.6 5.5 - - - +
55A SER* 3.3 28.3 + - - +
221A PHE* 3.2 40.0 - - - -
153B SER 3.3 9.9 + - - +
154B GLN 2.8 8.9 + - - +
156B THR* 1.3 79.2 - - - +
158B ASP* 1.3 64.6 + - - +
160B SER* 2.9 23.3 + - - -
161B GLU* 3.4 7.8 + - - +
----------------------------------------------------------
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Residues in contact with ASP 158 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52A GLN* 3.4 34.4 + - - +
50B PHE* 3.8 12.1 - - + -
54B TYR* 3.0 31.7 + - + +
154B GLN* 2.5 32.0 + - - +
155B LEU* 4.3 1.8 - - - -
157B ASN* 1.3 77.2 + - - +
159B PHE* 1.3 61.6 + - - +
161B GLU* 3.2 10.1 + - - +
162B LYS* 3.2 30.3 + - - +
----------------------------------------------------------
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Residues in contact with PHE 159 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
50B PHE* 3.8 12.8 - + + -
155B LEU 3.1 21.6 + - - +
156B THR 3.6 4.7 - - - +
157B ASN 3.2 0.6 - - - -
158B ASP* 1.3 74.5 - - - +
160B SER* 1.3 64.7 + - - +
161B GLU 3.1 1.8 - - - -
162B LYS* 3.2 3.6 + - + -
163B SER* 3.0 42.8 + - - -
215B LEU* 5.0 2.7 - - + -
218B VAL* 3.8 21.5 - - + -
219B GLN* 3.5 53.8 - - + -
222B PHE* 3.6 41.3 - + + -
----------------------------------------------------------
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Residues in contact with SER 160 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51A LYS* 3.9 17.7 + - - -
156B THR 3.5 6.7 + - - -
157B ASN* 2.9 20.2 + - - -
159B PHE* 1.3 85.2 - - - +
161B GLU* 1.3 57.3 + - - +
163B SER* 3.5 8.8 + - - -
164B SER* 3.1 25.8 + - - -
----------------------------------------------------------
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Residues in contact with GLU 161 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
48A SER* 2.5 46.9 + - - +
51A LYS* 3.2 34.0 + - + +
52A GLN* 4.9 11.0 - - + +
217A SER* 5.4 0.2 + - - -
157B ASN* 3.4 11.4 + - - +
158B ASP* 3.2 18.3 + - - +
159B PHE 3.1 0.8 - - - -
160B SER* 1.3 80.3 + - - +
162B LYS* 1.3 65.8 + - + +
164B SER* 3.6 10.4 + - - -
165B TYR* 3.1 22.7 + - - +
----------------------------------------------------------
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Residues in contact with LYS 162 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
46B GLU* 3.2 41.9 + - - +
47B LEU* 4.6 17.5 - - + +
49B ARG* 6.0 2.5 - - - +
50B PHE* 3.7 38.8 - - + +
158B ASP* 3.2 21.5 + - - +
159B PHE* 3.2 9.8 + - + +
161B GLU* 1.3 78.9 + - + +
163B SER* 1.3 57.6 - - - +
164B SER 3.0 1.8 - - - -
165B TYR* 2.9 25.0 + - + +
166B PHE* 2.7 35.7 + - - +
215B LEU* 4.6 4.9 - - + +
218B VAL* 5.7 4.5 - - + -
----------------------------------------------------------
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Residues in contact with SER 163 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
159B PHE* 3.0 41.3 + - - -
160B SER* 3.8 9.6 - - - -
161B GLU 3.4 0.2 - - - -
162B LYS* 1.3 76.6 - - - +
164B SER* 1.3 60.0 + - - +
166B PHE* 3.7 12.8 - - - +
167B GLN* 3.7 8.3 + - - +
215B LEU* 4.0 24.0 - - - +
----------------------------------------------------------
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Residues in contact with SER 164 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51A LYS* 5.6 2.0 - - - -
214A LYS* 3.5 27.9 + - - +
160B SER 3.1 17.3 + - - -
161B GLU* 3.7 16.0 + - - -
162B LYS 3.0 0.4 - - - -
163B SER* 1.3 77.3 - - - +
165B TYR* 1.3 63.4 + - - +
166B PHE 3.2 0.2 - - - -
167B GLN* 3.6 3.7 + - - +
168B SER* 3.1 24.6 + - - -
----------------------------------------------------------
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Residues in contact with TYR 165 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
42B GLU* 4.2 1.9 + - - +
43B THR* 3.7 31.2 - - - -
46B GLU* 3.7 34.0 - - + +
47B LEU* 5.0 8.7 - - + -
161B GLU 3.1 12.7 + - - +
162B LYS* 2.9 31.6 + - + +
164B SER* 1.3 76.8 - - - +
166B PHE* 1.3 65.6 + - - +
168B SER* 3.7 6.9 - - - -
169B GLN* 2.9 65.9 + - - +
----------------------------------------------------------
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Residues in contact with PHE 166 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
43B THR* 5.6 2.7 - - + -
47B LEU* 4.5 12.3 - - + -
162B LYS 2.7 19.4 + - - +
163B SER 3.7 8.1 - - - +
165B TYR* 1.3 76.7 - - - +
167B GLN* 1.3 74.2 + - + +
169B GLN* 2.7 25.2 + - - +
170B VAL* 2.8 35.2 + - + +
208B ILE* 4.8 1.6 - - + -
211B LEU* 3.2 41.5 - - + -
212B LYS* 3.5 35.0 - - + -
215B LEU* 3.7 35.0 - - + -
----------------------------------------------------------
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Residues in contact with GLN 167 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
210A GLU* 4.6 11.3 + - - +
214A LYS* 5.8 1.6 + - - -
163B SER 3.7 6.4 + - - +
164B SER* 3.6 6.5 + - - +
165B TYR 3.6 0.2 - - - -
166B PHE* 1.3 91.1 - - + +
168B SER* 1.3 62.1 + - - +
169B GLN 2.9 0.2 - - - -
170B VAL* 3.8 10.0 - - + +
171B ASP* 3.0 45.0 + - - +
----------------------------------------------------------
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Residues in contact with SER 168 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
37A TRP* 4.8 5.0 + - - -
40A PHE* 5.4 11.5 - - - -
44A ILE* 4.6 14.1 - - - +
210A GLU* 4.4 4.6 + - - -
214A LYS* 3.2 31.9 + - - -
164B SER* 3.1 19.1 + - - -
165B TYR* 4.0 8.5 - - - -
167B GLN* 1.3 76.8 - - - +
169B GLN* 1.3 61.5 + - - +
171B ASP* 3.9 9.8 - - - +
172B LYS* 3.7 15.6 + - - +
----------------------------------------------------------
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Residues in contact with GLN 169 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
41A ASP* 5.3 0.2 - - - +
39B THR* 4.3 14.3 + - + +
42B GLU* 4.9 9.9 + - - +
43B THR* 2.5 38.8 + - - +
165B TYR* 2.9 48.7 + - + +
166B PHE* 2.7 8.2 + - - +
168B SER* 1.3 79.9 - - - +
170B VAL* 1.3 57.4 + - + -
171B ASP 3.0 1.8 - - - -
172B LYS* 2.9 49.3 + - - +
173B ILE* 3.1 14.4 + - - +
----------------------------------------------------------
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Residues in contact with VAL 170 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
166B PHE* 2.8 57.8 + - + +
167B GLN* 3.8 11.7 - - + +
169B GLN* 1.3 70.8 - - - +
171B ASP* 1.3 70.2 + - - +
173B ILE* 3.1 24.4 + - - +
174B ARG* 3.1 34.9 + - - +
208B ILE* 3.3 25.3 - - + +
211B LEU* 4.2 6.9 - - + +
----------------------------------------------------------
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Residues in contact with ASP 171 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
37A TRP* 4.3 14.8 - - + -
206A LYS* 3.3 34.4 + - + +
210A GLU* 3.4 22.5 - - - +
167B GLN* 3.0 31.5 + - - +
168B SER* 3.9 7.2 - - - +
170B VAL* 1.3 79.6 - - - +
172B LYS* 1.3 67.4 + - - +
173B ILE 2.8 2.4 + - - -
174B ARG* 2.9 24.0 + - - +
175B LYS* 2.9 13.5 + - - +
----------------------------------------------------------
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Residues in contact with LYS 172 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
37A TRP* 3.0 51.0 - - + +
41A ASP* 2.6 30.9 + - - -
39B THR* 3.9 23.3 - - + +
168B SER 3.7 6.7 + - - +
169B GLN* 2.9 41.9 + - - +
171B ASP* 1.3 75.1 - - - +
173B ILE* 1.3 54.9 + - - +
175B LYS* 3.7 1.1 + - - +
176B GLU* 3.0 52.1 + - + +
----------------------------------------------------------
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Residues in contact with ILE 173 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
36B PRO* 3.4 29.3 - - + +
39B THR* 3.3 22.9 - - + +
40B PHE* 4.1 16.6 - - + -
43B THR* 4.8 1.1 - - + -
169B GLN 3.2 14.1 - - - +
170B VAL* 3.2 10.5 - - - +
171B ASP 2.8 1.8 + - - -
172B LYS* 1.3 75.8 - - - +
174B ARG* 1.3 64.2 + - - +
176B GLU* 4.6 0.2 - - - -
177B ALA* 3.1 22.5 + - - +
203B VAL* 4.5 17.7 - - + -
207B LEU* 4.6 10.5 - - + -
208B ILE* 4.7 7.0 - - + -
211B LEU* 3.3 34.5 - - + -
----------------------------------------------------------
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Residues in contact with ARG 174 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
206A LYS* 4.3 18.6 - - - +
170B VAL* 3.1 30.0 + - - +
171B ASP* 2.9 19.4 + - - +
173B ILE* 1.3 73.3 - - - +
175B LYS* 1.3 61.1 + - - +
177B ALA* 2.9 4.9 + - - +
178B TYR* 2.8 62.8 + - + +
203B VAL* 5.3 3.8 - - + -
204B GLU* 2.7 37.6 + - - +
208B ILE* 4.1 21.0 - - + +
212B LYS* 5.3 4.4 - - - +
----------------------------------------------------------
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Residues in contact with LYS 175 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
31A LEU* 5.4 6.2 - - - +
32A ASP* 4.3 16.0 + - - -
35A ILE* 4.5 22.6 + - + -
37A TRP* 3.6 59.2 - - + +
202A VAL* 5.9 2.7 - - + -
171B ASP 2.9 14.6 + - - +
172B LYS 3.9 1.6 - - - +
174B ARG* 1.3 77.9 - - - +
176B GLU* 1.3 72.6 + - + +
178B TYR* 5.4 1.1 - - - -
179B ALA* 3.1 34.4 + - + +
----------------------------------------------------------
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Residues in contact with GLU 176 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
33B GLN* 2.8 19.3 - - - +
36B PRO* 3.5 19.7 - - + +
38B GLN* 5.9 0.5 - - - +
39B THR* 2.9 27.9 + - - -
172B LYS* 3.0 38.6 + - + +
173B ILE 3.8 4.3 - - - +
174B ARG 3.0 0.2 - - - -
175B LYS* 1.3 92.4 - - + +
177B ALA* 1.3 63.7 + - - +
179B ALA* 4.2 2.6 - - - +
180B GLY* 3.5 10.2 + - - -
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Residues in contact with ALA 177 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
33B GLN 3.8 2.0 - - - -
34B VAL* 3.3 26.6 - - - +
36B PRO* 3.9 4.7 - - + +
173B ILE 3.1 17.1 + - - +
174B ARG 2.9 2.8 + - - +
176B GLU* 1.3 78.4 - - - +
178B TYR* 1.3 70.7 + - + +
180B GLY* 3.1 2.9 + - - -
181B ALA* 2.9 25.1 + - - +
199B ALA* 4.2 4.2 - - + +
203B VAL* 3.8 21.3 - - + -
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Residues in contact with TYR 178 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
174B ARG* 2.8 44.6 + - + +
175B LYS* 5.2 1.3 - - - +
177B ALA* 1.3 83.3 - - + +
179B ALA* 1.3 54.7 + - - +
180B GLY 2.9 4.7 - - - -
181B ALA* 4.1 7.4 - - + +
182B ALA* 2.8 35.5 + - - +
196B TYR* 5.6 11.9 - + + -
199B ALA* 5.0 2.5 - - + -
200B ALA* 4.0 31.8 - - + +
203B VAL* 4.5 5.6 - - + +
204B GLU* 3.0 35.8 + - - +
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Residues in contact with ALA 179 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
27A TYR* 2.6 35.9 + - - -
28A ASN* 6.0 0.7 - - - +
31A LEU* 3.5 26.2 - - + -
35A ILE* 6.3 1.6 - - + -
33B GLN* 6.0 0.4 - - - -
175B LYS* 3.1 29.9 + - - +
176B GLU* 4.2 4.5 - - - +
178B TYR* 1.3 77.5 - - - +
180B GLY* 1.3 57.5 + - - +
182B ALA* 4.3 2.7 - - - -
183B ALA 3.6 1.7 + - - -
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Residues in contact with GLY 180 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
27A TYR* 5.2 0.9 - - - -
30B TYR* 3.1 20.1 + - - -
33B GLN* 4.2 17.0 - - - -
34B VAL* 4.2 6.5 - - - -
176B GLU 3.5 9.9 + - - -
177B ALA 3.1 7.9 + - - -
178B TYR 2.9 1.8 - - - -
179B ALA* 1.3 78.4 - - - +
181B ALA* 1.3 63.5 + - - -
182B ALA 3.3 0.2 - - - -
183B ALA* 3.0 20.8 - - - +
----------------------------------------------------------
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Residues in contact with ALA 181 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
30B TYR* 3.9 0.7 - - - -
34B VAL* 4.4 2.7 - - - +
177B ALA 2.9 16.9 + - - +
178B TYR* 3.4 7.4 + - + +
180B GLY* 1.3 67.0 - - - +
182B ALA* 1.3 53.7 + - - +
183B ALA 2.7 4.4 + - - -
184B GLY* 2.6 30.3 + - - -
192B LEU* 4.7 6.7 - - + +
195B SER* 3.0 27.9 + - - +
196B TYR* 3.9 31.4 - - + -
199B ALA* 4.3 9.0 - - + -
----------------------------------------------------------
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Residues in contact with ALA 182 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
27A TYR* 4.3 6.7 - - - +
198A ILE* 6.2 4.5 - - + -
178B TYR 2.8 24.5 + - - +
179B ALA* 4.2 6.3 - - - +
181B ALA* 1.3 73.0 - - - +
183B ALA* 1.3 57.1 + - - +
184B GLY 2.9 5.9 + - - -
185B VAL* 3.2 27.0 + - + +
192B LEU* 5.4 5.8 - - - +
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il