Contacts of the helix formed by residues 698 - 772 (chain A) in PDB entry 3DPK
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with SER 698 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
696A GLN 3.8 2.0 + - - -
697A LEU* 1.3 75.4 - - - +
699A SER* 1.3 64.8 + - - +
753A ARG* 3.1 11.4 + - - +
754A ASP* 3.0 42.0 + - - +
755A LEU* 3.2 17.2 + - - +
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Residues in contact with SER 699 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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698A SER* 1.3 72.8 - - - +
753A ARG* 1.3 65.9 + - - +
755A LEU* 3.3 14.8 + - - +
756A LEU* 3.0 34.1 + - - +
849A PHE* 5.0 2.5 - - - -
880A PHE 5.8 3.4 - - - -
882A PRO* 6.0 7.2 - - - -
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Residues in contact with ARG 753 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
698A SER* 3.1 7.7 + - - +
699A SER* 1.3 85.7 + - - +
754A ASP* 1.3 59.3 + - - +
756A LEU* 3.4 12.4 + - + +
757A HIS* 2.9 58.5 + - + +
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Residues in contact with ASP 754 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
696A GLN 4.2 5.2 - - - +
697A LEU* 4.0 21.9 - - + +
698A SER* 3.0 37.3 + - - +
753A ARG* 1.3 78.0 - - - +
755A LEU* 1.3 57.5 + - - +
757A HIS* 3.2 14.5 + - - +
758A PHE* 3.0 42.2 + - + -
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Residues in contact with LEU 755 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
675A LEU* 4.0 16.8 - - + -
697A LEU* 4.2 17.5 - - + -
698A SER 3.2 13.5 + - - +
699A SER* 3.6 12.3 - - - +
754A ASP* 1.3 76.0 - - - +
756A LEU* 1.3 61.0 + - - +
758A PHE* 3.4 9.4 + - + +
759A SER* 2.7 28.6 + - - -
848A ILE* 3.8 31.4 - - + +
849A PHE* 3.7 34.3 - - + -
851A LEU* 4.1 16.6 - - + -
880A PHE* 4.5 12.3 - - + +
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Residues in contact with LEU 756 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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699A SER* 3.0 28.6 + - - +
753A ARG* 3.7 11.7 - - + +
754A ASP 3.3 0.2 - - - -
755A LEU* 1.3 77.7 - - - +
757A HIS* 1.3 58.1 + - + +
759A SER* 3.3 5.9 + - - -
760A SER* 2.9 32.2 + - - +
849A PHE* 4.0 10.3 - - + -
882A PRO* 5.3 8.5 - - + -
885A ILE* 3.4 39.0 - - + -
910A LEU* 4.7 11.4 - - + +
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Residues in contact with HIS 757 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
753A ARG* 2.9 46.1 + - + +
754A ASP* 3.2 17.2 + - - +
756A LEU* 1.3 76.2 - - + +
758A PHE* 1.3 69.9 + - + +
760A SER* 3.2 6.6 + - - +
761A GLN* 2.8 47.4 + - - +
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Residues in contact with PHE 758 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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671A LEU* 3.9 26.2 - - + -
674A PHE* 3.8 25.6 - + - -
675A LEU* 4.6 3.4 - - + -
697A LEU* 4.0 22.2 - - + -
754A ASP* 3.0 29.1 + - + -
755A LEU* 3.8 19.3 - - + +
757A HIS* 1.3 78.4 - - + +
759A SER* 1.3 64.5 + - - +
761A GLN* 3.7 8.9 - - - +
762A VAL* 3.0 31.2 + - - +
786A LEU* 3.9 19.7 - - + -
790A HIS* 3.5 29.6 - - + -
792A ALA* 4.6 3.4 - - + -
848A ILE* 4.3 14.6 - - + -
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Residues in contact with SER 759 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
755A LEU 2.7 17.3 + - - -
756A LEU* 3.4 10.5 - - - -
758A PHE* 1.3 80.7 - - - +
760A SER* 1.3 57.1 + - - +
762A VAL* 3.7 1.5 + - - -
763A ALA* 3.1 17.2 + - - +
841A TYR* 2.6 24.5 + - - -
845A LEU* 3.6 19.3 - - - +
848A ILE* 4.0 10.8 - - - +
849A PHE* 3.2 23.6 - - - -
885A ILE* 6.2 0.2 - - - -
910A LEU* 3.9 11.9 - - - -
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Residues in contact with SER 760 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
756A LEU* 2.9 19.5 + - - +
757A HIS* 3.2 7.8 + - - -
759A SER* 1.3 75.6 - - - +
761A GLN* 1.3 64.7 + - - +
763A ALA* 3.3 2.9 + - - +
764A GLN* 3.0 42.9 + - - +
907A CYS* 4.7 2.1 - - - +
910A LEU* 3.4 34.9 + - - +
911A GLN* 4.8 7.2 + - - -
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Residues in contact with GLN 761 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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645A ASN* 3.3 34.2 - - - +
757A HIS* 2.8 42.2 + - - +
758A PHE* 3.7 7.9 - - - +
760A SER* 1.3 72.5 - - - +
762A VAL* 1.3 62.4 + - - +
764A GLN* 3.2 13.0 + - - +
765A GLY 3.1 18.0 + - - -
790A HIS 3.9 6.1 + - - +
791A VAL* 3.6 20.2 - - + +
792A ALA* 2.8 35.4 + - + +
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Residues in contact with VAL 762 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
645A ASN* 5.4 1.3 - - - -
671A LEU* 5.4 2.7 - - + -
758A PHE 3.0 18.7 + - - +
759A SER* 4.1 3.8 - - - +
761A GLN* 1.3 73.1 - - - +
763A ALA* 1.3 58.1 + - - +
765A GLY* 3.2 3.1 + - - +
766A MET* 2.9 36.3 + - + +
779A VAL* 5.2 3.1 - - + -
784A VAL* 3.8 33.2 - - + -
792A ALA* 4.1 6.7 - - + -
794A ILE* 4.3 19.3 - - + +
841A TYR* 3.8 14.1 - - + -
844A LEU* 3.6 26.5 - - + -
848A ILE* 5.7 0.9 - - + -
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Residues in contact with ALA 763 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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759A SER 3.1 18.9 + - - +
760A SER 3.3 5.6 + - - +
762A VAL* 1.3 76.4 - - - +
764A GLN* 1.3 55.6 + - - +
766A MET* 3.3 6.1 + - - +
767A ALA* 2.8 29.6 + - - +
841A TYR* 3.6 21.0 - - + +
903A PHE* 4.0 7.2 - - + +
906A ILE* 3.9 17.3 - - + -
907A CYS* 3.5 17.1 - - - -
910A LEU* 4.2 4.7 - - + -
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Residues in contact with GLN 764 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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643A HIS* 3.6 12.7 + - + +
644A GLU* 3.3 14.0 - - - +
645A ASN* 2.9 23.6 + - - +
760A SER* 3.0 34.1 + - - +
761A GLN* 3.2 11.9 + - - +
763A ALA* 1.3 73.0 - - - +
765A GLY* 1.3 66.4 + - - +
767A ALA* 3.4 3.6 + - - +
768A PHE* 3.0 23.2 + - - +
907A CYS* 3.8 17.4 - - + +
911A GLN* 4.0 18.0 + - - +
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Residues in contact with GLY 765 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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643A HIS* 4.0 7.2 - - - -
645A ASN* 3.9 26.2 - - - +
646A ILE* 4.0 3.6 - - - +
761A GLN 3.1 10.3 + - - -
762A VAL 3.2 3.5 + - - -
764A GLN* 1.3 78.1 - - - +
766A MET* 1.3 56.3 + - - +
768A PHE* 3.4 4.2 - - - +
769A LEU* 3.1 29.3 + - - +
794A ILE* 3.8 9.6 - - - +
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Residues in contact with MET 766 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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762A VAL* 2.9 31.7 + - + +
763A ALA 3.7 0.4 - - - +
765A GLY* 1.3 74.2 - - - +
767A ALA* 1.3 64.0 + - - +
769A LEU* 3.2 11.0 + - + +
770A ALA* 3.0 24.1 + - - +
774A CYS 5.7 0.2 - - - +
776A HIS* 3.8 24.0 - - + -
779A VAL* 3.8 11.9 - - + -
794A ILE* 3.5 22.2 - - - -
837A ASP* 3.7 28.0 - - + +
841A TYR* 4.7 2.5 - - + -
903A PHE* 3.5 50.8 - - + -
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Residues in contact with ALA 767 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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763A ALA 2.8 17.7 + - - +
764A GLN* 3.9 5.2 - - - +
765A GLY 3.4 0.2 - - - -
766A MET* 1.3 76.5 - - - +
768A PHE* 1.3 62.2 + - - +
770A ALA* 3.5 4.9 + - - +
771A SER* 3.0 24.6 + - - -
903A PHE* 3.7 19.4 - - + +
904A GLN* 4.0 28.3 - - + +
907A CYS* 4.3 4.7 - - - -
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Residues in contact with PHE 768 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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640A LEU* 3.6 32.1 - - + -
641A GLY 3.8 15.0 - - - -
642A GLN 3.8 16.6 - - - -
643A HIS* 3.7 37.2 - + + +
646A ILE* 3.8 20.9 - - + -
764A GLN 3.0 13.9 + - - +
765A GLY 3.4 7.6 - - - +
767A ALA* 1.3 78.4 - - - +
769A LEU* 1.3 70.2 + - + +
771A SER* 2.5 27.9 + - - -
772A LYS* 3.2 33.4 + - + +
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Residues in contact with LEU 769 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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550A TRP* 3.7 52.0 - - + -
640A LEU* 3.9 18.6 - - + -
646A ILE* 4.1 8.7 - - + -
765A GLY 3.1 15.3 + - - +
766A MET* 3.2 19.0 + - + +
768A PHE* 1.3 81.2 - - + +
770A ALA* 1.3 58.7 + - - +
772A LYS* 2.8 21.1 + - - +
774A CYS* 3.0 39.1 + - + +
776A HIS* 4.3 9.4 - - + -
794A ILE* 3.9 15.0 - - + -
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Residues in contact with ALA 770 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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560A SER* 4.8 1.7 - - - -
766A MET 3.0 16.4 + - - +
767A ALA* 3.7 7.9 - - - +
769A LEU* 1.3 75.4 - - - +
771A SER* 1.3 57.4 + - - +
773A ASN* 3.1 23.7 + - - +
774A CYS 4.0 2.2 + - - -
834A VAL* 3.8 40.7 - - + +
903A PHE* 4.4 5.2 - - + -
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Residues in contact with SER 771 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
560A SER* 2.8 32.6 + - - -
767A ALA 3.0 13.9 + - - -
768A PHE* 2.5 26.7 + - - -
770A ALA* 1.3 76.2 - - - +
772A LYS* 1.3 70.9 + - - +
773A ASN 3.4 0.9 - - - -
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Residues in contact with LYS 772 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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552A ILE* 4.0 13.9 - - - +
560A SER* 5.4 0.2 - - - -
562A THR* 4.8 0.2 + - - -
639A HIS* 5.1 7.9 + - + -
640A LEU* 3.2 52.3 + - + +
768A PHE* 3.2 36.9 - - + +
769A LEU* 2.8 9.4 + - - +
771A SER* 1.3 86.4 - - - +
773A ASN* 1.3 72.9 + - - +
774A CYS 3.1 0.8 + - - +
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Residues in contact with ASN 773 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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552A ILE* 3.3 3.7 - - + -
553A ILE* 2.9 51.3 + - + +
555A SER* 3.8 23.5 - - - +
560A SER* 3.2 38.8 + - - +
561A TYR 3.8 1.4 - - - -
562A THR* 2.9 26.4 + - - +
770A ALA* 3.1 18.0 + - - +
771A SER 3.4 0.2 - - - -
772A LYS* 1.3 81.2 - - - +
774A CYS* 1.3 58.3 + - - +
775A ILE* 5.2 0.2 - - - -
834A VAL* 5.7 3.9 - - - +
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Residues in contact with CYS 774 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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550A TRP* 4.1 31.9 - - - -
551A LYS 3.4 7.2 - - - -
552A ILE* 3.7 22.9 - - + -
636A ILE* 4.8 2.2 - - - -
640A LEU* 4.2 8.5 - - + -
766A MET* 5.7 0.3 - - - +
769A LEU* 3.0 45.1 + - + +
770A ALA* 4.0 4.4 + - - +
772A LYS 4.2 2.2 - - - +
773A ASN* 1.3 78.7 - - - +
775A ILE* 1.3 75.1 + - - +
776A HIS 4.2 0.2 + - - -
834A VAL* 4.6 2.1 - - - +
837A ASP* 4.5 2.4 - - - +
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Residues in contact with ILE 775 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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549A ARG 4.2 0.2 - - - +
550A TRP* 3.2 7.8 - - - +
551A LYS* 2.8 53.9 + - + +
553A ILE* 4.0 29.4 - - + -
769A LEU* 5.4 0.4 - - - -
774A CYS* 1.3 78.9 - - - +
776A HIS* 1.3 59.8 + - - +
777A ARG* 3.8 28.7 - - + +
832A TYR* 3.7 26.7 - - + +
833A THR* 3.9 3.4 - - - +
834A VAL* 3.8 33.7 - - + +
837A ASP* 3.5 8.3 - - - +
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Residues in contact with HIS 776 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
549A ARG* 3.6 9.7 - - - +
550A TRP* 3.3 50.2 + + - +
766A MET* 3.8 30.3 - - + -
769A LEU* 4.3 4.3 - - + -
774A CYS 4.2 0.6 + - - -
775A ILE* 1.3 71.2 - - - +
777A ARG* 1.3 63.7 + - - +
778A ASP* 3.0 45.8 + - + +
779A VAL* 3.5 9.4 + - + +
783A ASN* 4.7 10.3 + - + +
794A ILE* 4.3 15.0 - - + +
795A GLY 4.0 11.3 + - - -
837A ASP* 2.9 18.0 + - - +
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Residues in contact with ARG 777 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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1A SO4 3.2 43.6 + - - -
548A VAL* 3.7 34.3 + - - +
549A ARG* 2.9 40.2 + - - +
551A LYS* 4.0 18.2 - - - +
775A ILE* 3.8 24.7 - - + +
776A HIS* 1.3 76.7 - - - +
778A ASP* 1.3 61.4 + - - +
779A VAL 3.9 1.1 - - - -
818A PRO* 4.7 9.2 - - - +
822A MET* 5.8 2.3 - - - +
832A TYR* 3.6 51.3 + - + +
836A SER* 5.8 0.2 - - - +
837A ASP* 3.0 18.8 + - - +
840A SER* 5.9 1.8 - - - -
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Residues in contact with ASP 778 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
548A VAL 4.5 15.2 - - - +
776A HIS* 3.0 19.7 + - + +
777A ARG* 1.3 77.8 - - - +
779A VAL* 1.3 65.6 + - - +
780A ALA* 3.3 1.0 + - - +
782A ARG* 2.9 25.8 + - - -
783A ASN* 2.9 37.3 + - - +
798A GLY* 5.8 3.1 - - - -
801A ARG* 4.9 3.8 - - - +
803A ILE* 5.5 1.0 - - - +
809A TYR* 2.6 25.8 + - - -
818A PRO* 3.4 17.1 - - - +
821A TRP* 5.7 0.8 - - - +
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Residues in contact with VAL 779 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
762A VAL* 5.2 2.9 - - + -
766A MET* 3.8 26.0 - - + -
776A HIS* 3.7 30.1 - - + +
777A ARG 3.9 0.6 - - - -
778A ASP* 1.3 73.0 - - - +
780A ALA* 1.3 68.7 + - - +
783A ASN* 5.3 0.2 - - - -
784A VAL* 6.0 0.7 - - + -
794A ILE* 6.4 1.6 - - + -
821A TRP* 3.3 19.0 - - - +
837A ASP* 4.3 13.5 - - - +
840A SER* 3.7 23.6 + - - +
841A TYR* 3.9 29.4 - - + +
844A LEU* 4.1 16.8 - - + -
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Residues in contact with ALA 780 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
778A ASP 3.3 6.1 + - - +
779A VAL* 1.3 82.3 - - - +
781A ALA* 1.3 61.2 - - - +
782A ARG* 3.6 34.8 - - + +
783A ASN* 2.8 24.0 + - - +
784A VAL* 3.5 7.3 + - - +
821A TRP* 3.3 20.0 - - + +
844A LEU* 3.8 8.5 - - - +
847A GLU* 3.7 6.3 - - - -
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Residues in contact with ALA 781 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
671A LEU* 3.4 15.5 + - + +
672A LEU* 3.4 34.2 + - + +
675A LEU* 4.7 3.1 - - + -
780A ALA* 1.3 72.3 - - - +
782A ARG* 1.3 61.7 + - - +
783A ASN 3.0 1.1 + - - -
784A VAL* 3.2 13.4 + - - +
844A LEU* 3.4 18.8 - - + +
847A GLU* 3.0 36.3 + - + +
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Residues in contact with ARG 782 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
670A ASP* 3.8 20.1 - - - +
672A LEU* 3.8 27.5 - - + +
778A ASP* 2.9 23.0 + - - -
780A ALA* 3.6 12.8 - - + +
781A ALA* 1.3 78.2 - - - +
783A ASN* 1.3 62.5 + - - +
784A VAL 3.5 1.5 + - - +
785A LEU* 4.5 4.0 - - - +
801A ARG* 3.0 39.6 + - - +
806A ASP* 4.1 13.0 - - - -
808A ASN* 4.5 7.4 - - - +
809A TYR* 2.9 26.9 + - - -
818A PRO* 3.2 24.0 - - - +
821A TRP* 3.3 43.4 - - - -
847A GLU* 4.8 0.8 + - - -
923A 8C5 4.6 1.4 - - - +
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Residues in contact with ASN 783 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
776A HIS* 4.7 9.7 + - + +
778A ASP* 2.9 54.5 + - - +
779A VAL* 5.3 0.2 - - - -
780A ALA* 2.8 13.2 + - - +
782A ARG* 1.3 84.1 - - - +
784A VAL* 1.3 61.8 + - - +
794A ILE* 4.0 13.5 - - - +
795A GLY 4.4 0.3 + - - -
797A PHE* 3.2 38.7 - - + +
801A ARG* 2.7 33.2 + - - +
809A TYR* 3.9 5.3 + - - -
----------------------------------------------------------
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Residues in contact with VAL 784 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
670A ASP* 3.3 5.2 - - - +
671A LEU* 2.8 43.5 + - + -
762A VAL* 3.8 23.1 - - + -
779A VAL* 6.0 0.7 - - + -
780A ALA 3.6 14.4 - - - +
781A ALA 3.2 7.2 + - - +
783A ASN* 1.3 84.2 - - - +
785A LEU* 1.3 66.5 + - - +
786A LEU* 4.9 0.2 - - + -
792A ALA* 3.7 29.8 - - + -
793A LYS 3.5 7.6 - - - +
794A ILE* 4.1 8.3 - - + -
844A LEU* 4.2 18.8 - - + -
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Residues in contact with LEU 785 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
647A VAL* 4.3 1.8 - - + -
666A CYS* 3.8 22.2 - - + -
669A GLY 3.3 9.2 - - - +
670A ASP* 4.0 17.7 - - + +
782A ARG 4.5 2.2 - - - +
784A VAL* 1.3 82.8 - - - +
786A LEU* 1.3 63.2 + - - +
787A THR 4.2 0.2 - - - -
791A VAL 3.7 0.2 - - - +
792A ALA* 3.2 5.7 - - - -
793A LYS* 2.8 36.4 + - - +
797A PHE* 3.5 36.1 - - + -
923A 8C5 3.5 60.8 - - + +
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Residues in contact with LEU 786 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
666A CYS* 3.4 9.1 - - - +
668A TYR* 2.9 40.7 + - + +
669A GLY 2.9 13.7 + - - +
671A LEU* 4.1 20.4 - - + -
674A PHE* 3.6 49.6 - - + -
758A PHE* 3.9 25.8 - - + -
784A VAL* 4.9 0.2 - - + -
785A LEU* 1.3 80.4 - - - +
787A THR* 1.3 60.1 + - - +
790A HIS* 3.9 16.2 - - + +
791A VAL 3.5 1.6 - - - +
792A ALA* 3.9 19.5 - - + -
----------------------------------------------------------
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Residues in contact with THR 787 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
665A TYR 3.7 14.4 + - - -
666A CYS* 3.9 20.0 - - - +
667A CYS* 4.2 3.6 + - - +
668A TYR* 3.1 13.4 - - - -
785A LEU 4.2 0.6 - - - -
786A LEU* 1.3 74.1 - - - +
788A ASN* 1.3 80.9 + - + +
790A HIS* 2.7 29.3 + - - -
791A VAL* 2.9 28.7 + - + +
793A LYS* 3.8 25.7 - - + -
----------------------------------------------------------
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Residues in contact with ASN 788 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
665A TYR 5.1 2.1 - - - +
667A CYS* 4.1 16.6 - - - +
668A TYR* 4.1 8.7 + - - -
787A THR* 1.3 96.2 + - + +
789A GLY* 1.3 60.5 + - - +
791A VAL* 3.4 18.2 - - - +
----------------------------------------------------------
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Residues in contact with GLY 789 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
668A TYR* 4.3 5.5 + - - -
761A GLN* 5.7 0.5 + - - -
788A ASN* 1.3 69.2 - - - +
790A HIS* 1.3 77.8 + - - +
791A VAL* 3.0 11.6 + - - +
----------------------------------------------------------
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Residues in contact with HIS 790 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
668A TYR* 3.6 45.8 + + - -
674A PHE* 3.6 36.0 - + - -
758A PHE* 3.5 31.2 - - + -
761A GLN* 3.9 4.0 + - - +
786A LEU* 3.9 11.0 - - + +
787A THR 2.7 13.4 + - - -
789A GLY* 1.3 84.0 - - - +
791A VAL* 1.3 60.6 + - - +
792A ALA 3.7 0.5 + - - -
----------------------------------------------------------
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Residues in contact with VAL 791 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
644A GLU* 4.4 12.8 - - + +
645A ASN* 3.8 13.9 - - - +
761A GLN* 3.6 17.0 - - - +
785A LEU 3.7 0.2 - - - +
786A LEU* 3.5 1.9 - - - -
787A THR* 2.9 38.5 + - + +
788A ASN 3.4 17.7 - - - +
789A GLY* 4.0 9.6 - - - +
790A HIS* 1.3 77.2 - - - +
792A ALA* 1.3 73.1 + - - +
793A LYS* 3.8 0.8 + - + -
----------------------------------------------------------
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Residues in contact with ALA 792 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
645A ASN* 3.0 27.7 + - - +
758A PHE* 4.3 8.3 - - + +
761A GLN* 2.8 29.9 + - + +
762A VAL* 4.1 11.0 - - + -
784A VAL* 3.7 22.0 - - + -
785A LEU 3.2 6.3 - - - -
786A LEU* 3.9 9.6 - - + -
790A HIS 3.7 0.6 + - - -
791A VAL* 1.3 73.3 - - - +
793A LYS* 1.3 64.5 + - - +
----------------------------------------------------------
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Residues in contact with LYS 793 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
644A GLU* 2.9 32.5 + - - +
645A ASN 3.3 4.9 - - - -
646A ILE 3.0 21.3 + - - +
647A VAL* 3.9 15.4 - - + +
648A ASN* 3.8 4.2 - - - +
664A GLU* 2.9 33.0 + - + +
666A CYS* 3.8 22.9 - - - -
762A VAL* 5.9 0.2 - - - -
784A VAL* 3.5 6.4 - - - -
785A LEU* 2.8 34.1 + - - +
787A THR* 3.8 26.5 - - + -
791A VAL* 4.6 1.3 - - + +
792A ALA* 1.3 80.3 - - - +
794A ILE* 1.3 64.1 + - - +
797A PHE* 4.9 0.3 - - - -
----------------------------------------------------------
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Residues in contact with ILE 794 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
550A TRP* 4.4 1.6 - - + -
645A ASN 3.0 6.6 + - - +
646A ILE* 3.2 26.7 - - + +
647A VAL* 2.8 31.3 + - - -
762A VAL* 4.3 19.5 - - + +
765A GLY* 3.8 22.4 - - - -
766A MET* 3.5 32.5 - - + +
769A LEU* 3.9 8.7 - - + -
776A HIS* 4.3 12.8 - - + +
779A VAL* 6.4 1.6 - - + -
783A ASN 4.0 15.0 - - - +
784A VAL* 4.1 15.5 - - + -
793A LYS* 1.3 79.7 - - - +
795A GLY* 1.3 54.5 + - - +
797A PHE* 4.1 0.2 - - - -
----------------------------------------------------------
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Residues in contact with GLY 795 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
550A TRP* 3.2 25.3 + - - -
637A MET* 6.2 0.7 - - - -
646A ILE* 5.1 0.9 - - - -
647A VAL* 4.1 8.7 - - - -
776A HIS* 4.0 7.8 + - - -
783A ASN 4.4 0.2 + - - -
794A ILE* 1.3 76.0 - - - +
796A ASP* 1.3 62.4 + - - -
797A PHE* 3.3 35.0 + - - -
923A 8C5 5.5 0.9 - - - -
----------------------------------------------------------
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Residues in contact with ASP 796 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
549A ARG* 3.7 15.7 - - - +
550A TRP* 3.0 60.7 + - + +
616A LYS* 3.0 23.0 + - - -
633A GLU* 3.4 29.7 - - + +
636A ILE* 5.7 1.7 - - - +
637A MET* 5.9 3.5 - - + +
795A GLY* 1.3 70.6 - - - -
797A PHE* 1.3 58.7 + - - +
798A GLY* 3.2 14.6 + - - -
923A 8C5 3.7 9.7 - - - +
----------------------------------------------------------
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Residues in contact with PHE 797 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
647A VAL* 3.8 10.1 - - + -
783A ASN* 3.2 56.3 - - + +
784A VAL* 5.0 0.2 - - - -
785A LEU* 3.5 30.7 - - + -
794A ILE* 4.1 1.8 - - - -
795A GLY* 3.3 37.2 + - - -
796A ASP* 1.3 72.8 + - - +
798A GLY* 1.3 65.0 + - - +
799A LEU 3.2 3.1 - - - -
800A ALA* 3.1 5.1 + - - +
801A ARG* 2.9 24.4 + - + +
923A 8C5 3.3 66.6 - + + +
----------------------------------------------------------
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Residues in contact with GLY 798 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
548A VAL 4.4 15.3 - - - -
549A ARG* 5.2 5.6 - - - -
778A ASP* 5.8 3.1 - - - -
796A ASP* 3.2 14.6 + - - -
797A PHE* 1.3 77.7 - - - +
799A LEU* 1.3 60.7 + - - +
801A ARG* 3.9 11.3 + - - +
803A ILE* 4.0 19.3 - - - +
----------------------------------------------------------
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Residues in contact with LEU 799 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
549A ARG* 6.3 5.6 - - + -
591A GLY* 3.7 7.1 - - - -
592A ALA 4.7 0.3 + - - -
593A PHE* 4.5 19.9 + - + +
594A GLY* 3.3 30.7 + - - +
616A LYS* 4.6 10.3 - - + +
618A LEU* 5.5 4.5 - - + -
626A GLU* 5.1 9.0 - - - +
629A ALA* 4.0 33.0 - - + +
630A LEU* 4.0 21.1 - - + +
633A GLU* 3.1 28.0 + - + +
796A ASP 5.0 0.2 + - - -
797A PHE 3.2 1.0 - - - -
798A GLY* 1.3 78.1 - - - +
800A ALA* 1.3 58.8 + - - +
801A ARG 3.5 0.7 - - - -
----------------------------------------------------------
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Residues in contact with ALA 800 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
589A GLY 3.7 3.4 - - - +
590A ALA 3.3 20.4 + - - +
591A GLY 3.5 9.0 - - - +
594A GLY 4.0 0.9 - - - -
595A LYS* 4.4 5.6 - - - +
596A VAL* 3.4 40.4 - - + +
616A LYS* 4.2 8.7 - - + +
797A PHE* 3.1 7.1 + - - +
799A LEU* 1.3 78.8 - - - +
801A ARG* 1.3 60.3 + - - +
802A ASP 3.7 0.7 + - - -
923A 8C5 3.9 18.2 - - + +
----------------------------------------------------------
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Residues in contact with ARG 801 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
590A ALA 3.7 1.6 - - - -
591A GLY* 3.2 11.6 - - - -
592A ALA 4.6 0.2 + - - -
778A ASP* 4.9 2.7 - - - +
782A ARG* 3.0 40.9 + - - +
783A ASN* 2.7 28.5 + - - +
797A PHE* 2.9 17.8 + - + +
798A GLY* 4.1 9.3 - - - +
799A LEU 3.5 1.2 - - - -
800A ALA* 1.3 77.5 - - - +
802A ASP* 1.3 62.1 + - - +
803A ILE* 2.7 47.4 + - + +
806A ASP* 4.6 6.1 + - - -
809A TYR* 3.7 25.5 + - - +
923A 8C5 3.9 27.8 - - - +
----------------------------------------------------------
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Residues in contact with ASP 802 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
590A ALA 3.2 21.8 + - - +
591A GLY* 4.2 3.5 - - - -
800A ALA 3.7 1.0 + - - -
801A ARG* 1.3 78.7 - - - +
803A ILE* 1.3 60.2 + - - +
804A MET* 4.2 2.3 + - - +
805A ASN* 3.4 41.1 + - - +
806A ASP* 3.3 19.2 + - - +
923A 8C5 5.8 0.6 - - - +
----------------------------------------------------------
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Residues in contact with ILE 803 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
548A VAL 6.0 1.3 - - - +
591A GLY* 5.0 1.6 - - - -
778A ASP* 5.5 1.6 - - - +
798A GLY* 4.0 17.0 - - - +
801A ARG* 2.7 38.8 + - + +
802A ASP* 1.3 70.5 - - - +
804A MET* 1.3 70.5 + - + +
805A ASN 3.4 0.3 + - - -
806A ASP 3.4 17.8 - - - +
809A TYR* 3.9 36.1 - - + +
816A ARG* 3.8 35.8 + - + +
----------------------------------------------------------
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Residues in contact with MET 804 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
592A ALA* 4.4 25.1 - - + +
802A ASP* 3.4 1.9 - - - +
803A ILE* 1.3 82.9 - - + +
805A ASN* 1.3 70.2 + - - +
806A ASP 3.4 2.0 + - - +
816A ARG* 3.1 60.6 + - - +
----------------------------------------------------------
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Residues in contact with ASN 805 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
802A ASP* 3.4 32.3 + - - +
803A ILE 3.2 0.4 - - - -
804A MET* 1.3 87.4 - - - +
806A ASP* 1.3 59.0 + - - +
807A SER 4.0 1.7 + - - -
----------------------------------------------------------
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Residues in contact with ASP 806 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
782A ARG* 4.1 13.3 - - - -
801A ARG* 4.6 7.8 + - - -
802A ASP* 3.3 19.3 + - + +
803A ILE 3.4 10.2 + - - +
804A MET 3.4 1.6 - - - +
805A ASN* 1.3 77.7 - - - +
807A SER* 1.3 59.6 + - - +
808A ASN* 2.9 29.4 + - - +
809A TYR* 2.9 48.5 + - + +
----------------------------------------------------------
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Residues in contact with SER 807 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
2A SO4 4.7 8.1 + - - -
805A ASN 4.0 2.4 + - - -
806A ASP* 1.3 74.4 + - - +
808A ASN* 1.3 62.2 + - - +
809A TYR 3.1 5.1 + - - +
810A ILE* 3.6 17.5 - - - +
----------------------------------------------------------
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Residues in contact with ASN 808 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
2A SO4 2.8 31.5 + - - -
782A ARG* 4.5 10.3 - - - +
806A ASP* 2.9 24.1 + - - +
807A SER* 1.3 80.9 + - - +
809A TYR* 1.3 61.3 + - + +
810A ILE* 3.7 5.7 + - - +
817A LEU 3.6 1.4 - - - +
818A PRO* 3.4 19.9 - - - +
819A VAL 4.0 2.9 + - - -
820A LYS* 5.2 4.0 + - - +
821A TRP* 3.8 26.7 - - + -
854A ASN* 2.9 25.1 + - - +
----------------------------------------------------------
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Residues in contact with TYR 809 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
778A ASP* 2.6 30.2 + - - -
782A ARG* 2.9 34.4 + - - -
783A ASN* 3.9 0.7 + - - -
801A ARG* 3.7 17.7 - - - -
803A ILE* 3.9 41.1 - - + +
806A ASP* 2.9 42.3 + - + +
807A SER* 3.9 5.4 - - - +
808A ASN* 1.3 80.3 - - - +
810A ILE* 1.3 62.2 + - - +
811A VAL* 3.8 2.6 + - - +
816A ARG* 3.7 33.5 + - + -
817A LEU 3.4 2.7 - - - -
818A PRO* 3.9 22.9 - - + -
----------------------------------------------------------
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Residues in contact with ILE 810 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
807A SER 3.6 20.9 - - - +
808A ASN* 4.1 6.1 - - - +
809A TYR* 1.3 72.2 - - - +
811A VAL* 1.3 75.6 + - - +
816A ARG* 3.2 2.2 - - - -
817A LEU* 2.7 39.1 + - - +
819A VAL* 3.8 26.2 - - + +
820A LYS 5.6 0.2 - - - +
861A VAL* 4.2 36.3 - - + +
866A TYR* 4.7 4.5 - - - +
----------------------------------------------------------
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Residues in contact with VAL 811 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
809A TYR 3.8 2.3 + - - +
810A ILE* 1.3 87.7 - - - +
816A ARG* 3.7 50.3 - - + +
----------------------------------------------------------
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Residues in contact with ARG 816 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
803A ILE* 3.8 29.2 + - + +
804A MET* 3.1 60.3 + - - +
809A TYR* 3.7 25.4 + - + -
810A ILE 3.2 13.2 + - - +
811A VAL* 3.7 46.6 - - + +
817A LEU* 1.3 73.7 + - - +
818A PRO* 4.4 0.3 - - - +
----------------------------------------------------------
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Residues in contact with LEU 817 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
548A VAL* 5.0 19.1 - - + +
809A TYR* 3.4 2.9 - - - -
810A ILE* 2.7 38.7 + - - +
816A ARG* 1.3 87.6 - - - +
818A PRO* 1.3 69.0 - - + +
819A VAL* 2.9 17.4 + - + -
822A MET* 3.6 25.6 - - + -
826A SER 5.7 1.1 - - - +
830A CYS* 6.1 5.2 - - - -
832A TYR* 4.0 15.7 - - - +
----------------------------------------------------------
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Residues in contact with PRO 818 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
548A VAL 6.0 1.6 - - - +
777A ARG 4.7 9.9 - - - +
778A ASP* 3.4 21.1 - - - +
782A ARG* 3.2 26.5 - - - +
808A ASN 3.4 14.4 - - - +
809A TYR* 3.9 16.1 - - + -
816A ARG 4.4 0.2 - - - +
817A LEU* 1.3 88.6 - - + +
819A VAL* 1.3 64.1 + - - +
820A LYS 3.3 2.9 - - - -
821A TRP* 3.0 22.5 + - + +
822A MET* 3.3 21.8 + - + +
832A TYR* 5.8 0.4 - - - +
----------------------------------------------------------
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Residues in contact with VAL 819 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
808A ASN 4.0 3.4 + - - -
810A ILE* 3.8 25.1 - - + +
817A LEU* 2.9 29.6 + - + +
818A PRO* 1.3 72.0 - - - +
820A LYS* 1.3 61.4 - - - +
821A TRP 3.1 1.3 + - - -
822A MET* 3.2 24.7 + - + +
827A ILE* 4.0 15.6 - - + +
861A VAL* 4.2 7.6 - - + -
865A PHE* 3.7 26.7 - - + -
866A TYR* 3.7 29.8 - - + +
----------------------------------------------------------
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Residues in contact with LYS 820 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
808A ASN* 5.2 3.9 + - - +
810A ILE* 5.6 0.4 - - - +
818A PRO 3.2 1.0 + - - -
819A VAL* 1.3 76.2 - - - +
821A TRP* 1.3 74.7 + - + +
822A MET 5.1 1.4 - - - +
839A TRP* 5.2 0.5 + - - -
843A ILE* 3.9 13.3 - - - +
854A ASN* 3.3 20.5 + - - +
855A PRO* 2.9 33.9 + - + +
856A TYR* 3.1 46.3 + - + -
858A GLY 5.1 1.2 - - - +
859A ILE 2.8 29.0 + - - +
861A VAL* 4.0 26.7 - - + +
865A PHE* 4.2 13.7 - - + -
----------------------------------------------------------
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Residues in contact with TRP 821 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
672A LEU* 6.3 0.9 - - + -
778A ASP* 5.7 0.9 - - - +
779A VAL 3.3 26.0 - - - +
780A ALA* 3.3 8.4 - - + +
782A ARG* 3.3 33.4 - - - +
808A ASN* 3.8 34.8 - - + -
818A PRO* 3.0 23.0 + - + +
820A LYS* 1.3 96.4 - - + +
822A MET* 1.3 58.9 + - + +
839A TRP* 3.6 6.0 - - - -
840A SER* 2.6 37.6 + - - +
843A ILE* 3.5 23.5 - - + +
847A GLU* 2.8 39.6 + - - -
854A ASN* 4.1 2.0 - - - -
855A PRO* 3.6 27.1 - - + -
----------------------------------------------------------
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Residues in contact with MET 822 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
777A ARG 5.8 2.2 - - - +
817A LEU* 3.6 39.0 - - + -
818A PRO* 3.3 21.3 - - + +
819A VAL* 3.2 27.2 + - + +
820A LYS 5.1 0.5 - - - -
821A TRP* 1.3 79.8 - - - +
823A ALA* 1.3 65.4 + - - +
824A PRO* 3.8 1.2 - - - +
826A SER* 3.9 28.7 - - - +
827A ILE* 3.8 23.8 - - + +
832A TYR* 3.4 28.9 - - + +
839A TRP* 3.2 13.2 + - - -
840A SER* 4.3 3.4 - - - +
869A VAL* 6.1 0.2 - - - +
----------------------------------------------------------
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Residues in contact with ALA 823 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
821A TRP 3.9 0.2 + - - -
822A MET* 1.3 76.2 - - - +
824A PRO* 1.3 74.4 - - + +
825A GLU* 3.5 28.3 - - - +
826A SER* 3.0 18.8 + - - +
827A ILE* 3.0 11.1 + - - +
836A SER* 4.0 10.9 + - - +
839A TRP* 3.6 29.2 - - + -
840A SER* 4.7 1.8 + - - -
900A ARG* 3.9 2.2 - - - +
----------------------------------------------------------
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Residues in contact with PRO 824 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
822A MET 4.2 0.9 - - - +
823A ALA* 1.3 84.9 - - + +
825A GLU* 1.3 58.5 + - - +
827A ILE* 3.0 7.7 + - + +
828A PHE* 2.7 63.2 + - + +
839A TRP* 3.5 37.2 - - + -
869A VAL* 4.6 10.1 - - + +
870A LYS* 5.2 2.0 - - - -
895A LEU* 4.1 22.7 - - + +
900A ARG* 4.5 3.6 - - - +
----------------------------------------------------------
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Residues in contact with GLU 825 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
823A ALA* 3.5 12.3 - - - +
824A PRO* 1.3 76.0 - - - +
826A SER* 1.3 59.4 + - - +
828A PHE* 5.1 0.9 - - - -
829A ASP* 2.9 36.7 + - - +
830A CYS 3.2 5.0 + - - -
831A VAL* 3.2 34.2 + - + +
833A THR* 4.5 2.1 + - - -
836A SER* 3.6 14.8 + - - -
895A LEU 4.6 1.0 - - - +
897A PRO* 3.7 19.8 - - + +
900A ARG* 2.9 40.0 + - - -
----------------------------------------------------------
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Residues in contact with SER 826 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
817A LEU* 5.7 0.9 - - - +
822A MET* 3.9 17.7 - - - +
823A ALA* 3.0 16.0 + - - +
825A GLU* 1.3 79.8 - - - +
827A ILE* 1.3 58.5 + - - +
830A CYS* 3.2 23.4 + - - -
831A VAL 2.6 24.3 + - - +
832A TYR* 3.9 23.2 + - - -
836A SER* 3.4 22.7 + - - -
----------------------------------------------------------
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Residues in contact with ILE 827 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
819A VAL* 4.0 27.8 - - + +
822A MET* 3.8 37.9 - - + +
823A ALA 3.0 8.2 + - - +
824A PRO* 3.0 11.0 + - + +
826A SER* 1.3 77.6 - - - +
828A PHE* 1.3 77.7 + - + +
829A ASP 3.5 0.4 + - - -
830A CYS* 4.5 6.1 + - - -
865A PHE* 4.9 2.7 - - + -
866A TYR* 3.5 30.3 - - + -
869A VAL* 4.7 13.5 - - + -
----------------------------------------------------------
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Residues in contact with PHE 828 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
824A PRO* 2.7 39.1 + - + +
825A GLU* 5.1 0.2 - - - -
827A ILE* 1.3 91.9 - - + +
829A ASP* 1.3 72.9 + - - +
830A CYS* 5.8 0.7 - - - -
866A TYR* 3.6 43.3 - + + -
869A VAL* 4.0 14.8 - - + -
870A LYS* 3.9 38.4 - - + +
----------------------------------------------------------
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Residues in contact with ASP 829 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
825A GLU* 2.9 22.7 + - - +
828A PHE* 1.3 94.6 - - - +
830A CYS* 1.3 72.6 + - - +
831A VAL* 2.9 22.4 + - + +
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il