Contacts of the helix formed by residues 709 - 741 (chain C) in PDB entry 3K23


Residue contacts within the protein are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332). A short description of the analytical approach is given at the end of the page.
For CSU analysis of other PDB entry

Note:
Non-standard 3 letter residue codes indicate a heterogroup. To identify and analyse, use LPC software

Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB   - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC   - hydrophobic-hydrophilic contact (destabilizing contact)
+/-  - indicates presence/absence of a specific contacts
*    - indicates residues forming contacts  by their side chain
       (including CA atoms)
Residues in contact with SER 709 (chain C).
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    708C  SER*     1.3    76.9    -      -       -      +
    710C  GLN*     1.3    61.5    +      -       -      +
    711C  ASN      3.2     6.3    +      -       -      -
    712C  TRP*     3.6    15.2    +      -       -      +
    713C  GLN*     3.7    18.6    +      -       -      +
----------------------------------------------------------
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Residues in contact with GLN 710 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    706C  GLY*     5.8     3.1    -      -       -      -
    707C  ASN*     5.6     4.7    -      -       -      +
    708C  SER*     3.5     5.6    -      -       -      +
    709C  SER*     1.3    77.4    -      -       -      +
    711C  ASN*     1.3    62.9    +      -       -      +
    712C  TRP      3.2     0.7    -      -       -      -
    713C  GLN*     3.4    25.2    +      -       +      +
    714C  ARG*     3.1    27.2    +      -       +      +
----------------------------------------------------------
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Residues in contact with ASN 711 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    701C  ILE*     3.4    39.1    -      -       +      +
    702C  VAL*     4.5    21.6    -      -       +      +
    706C  GLY      3.6     8.5    -      -       -      +
    707C  ASN*     3.5    34.4    -      -       -      +
    708C  SER      4.3    11.8    +      -       -      +
    709C  SER      3.2     1.4    -      -       -      -
    710C  GLN*     1.3    78.6    -      -       -      +
    712C  TRP*     1.3    73.8    +      -       +      +
    715C  PHE*     3.8    10.6    +      -       -      +
----------------------------------------------------------
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Residues in contact with TRP 712 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    708C  SER      5.5     3.4    -      -       -      -
    709C  SER*     3.6     9.5    +      -       -      +
    710C  GLN      3.2     0.2    -      -       -      -
    711C  ASN*     1.3    87.2    -      -       +      +
    713C  GLN*     1.3    64.4    +      -       +      +
    714C  ARG      3.3     0.4    -      -       -      -
    715C  PHE*     3.6    21.3    +      +       +      +
    716C  TYR*     2.9    59.5    +      +       +      -
----------------------------------------------------------
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Residues in contact with GLN 713 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    709C  SER*     3.7    17.0    -      -       -      +
    710C  GLN*     3.3    28.8    +      -       +      +
    712C  TRP*     1.3    79.2    -      -       +      +
    714C  ARG*     1.3    59.4    +      -       -      +
    716C  TYR*     3.6     6.2    +      -       -      +
    717C  GLN*     3.1    38.2    +      -       -      +
----------------------------------------------------------
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Residues in contact with ARG 714 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    656C  LEU*     2.7    32.7    +      -       +      -
    657C  GLN      3.2    18.0    +      -       -      -
    658C  VAL*     3.9     1.8    -      -       -      +
    662C  GLU*     2.9    39.0    +      -       -      -
    701C  ILE*     4.1    19.3    -      -       +      -
    704C  ARG*     3.6    24.7    -      -       -      +
    710C  GLN*     3.1    15.9    +      -       +      +
    712C  TRP      3.3     0.2    -      -       -      -
    713C  GLN*     1.3    75.2    -      -       -      +
    715C  PHE*     1.3    59.1    +      -       -      +
    717C  GLN*     3.0    17.4    +      -       +      +
    718C  LEU*     2.8    62.6    +      -       +      +
----------------------------------------------------------
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Residues in contact with PHE 715 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    694C  ILE*     3.6    42.6    -      -       +      -
    697C  LEU*     4.1    16.2    -      -       +      -
    698C  GLY*     4.6     5.8    -      -       -      -
    701C  ILE*     3.8    29.1    -      -       +      +
    711C  ASN      3.8    10.2    +      -       -      +
    712C  TRP*     3.6    25.0    +      +       +      +
    713C  GLN      3.4     0.2    -      -       -      -
    714C  ARG*     1.3    79.3    -      -       -      +
    716C  TYR*     1.3    71.9    +      +       -      +
    718C  LEU*     4.9     1.6    -      -       -      +
    719C  THR*     2.6    42.0    +      -       +      +
    774C  PHE*     5.6     3.6    -      +       -      -
----------------------------------------------------------
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Residues in contact with TYR 716 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    712C  TRP*     2.9    50.2    +      +       +      +
    713C  GLN*     4.0     5.8    -      -       -      +
    714C  ARG      3.2     0.4    -      -       -      -
    715C  PHE*     1.3    91.8    -      +       -      +
    717C  GLN*     1.3    63.8    +      -       -      +
    719C  THR*     3.0    14.3    +      -       -      -
    720C  LYS*     3.2    10.2    +      -       -      +
    775C  HIS*     3.3    24.8    +      +       -      +
----------------------------------------------------------
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Residues in contact with GLN 717 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    655C  ARG*     4.4     9.8    +      -       -      +
    656C  LEU*     3.4    34.9    -      -       +      +
    713C  GLN*     3.1    41.2    +      -       -      +
    714C  ARG*     3.0    22.2    +      -       +      +
    716C  TYR*     1.3    74.5    -      -       -      +
    718C  LEU*     1.3    59.4    +      -       +      +
    720C  LYS*     2.7    30.1    +      -       -      +
    721C  LEU*     3.1     8.7    +      -       -      +
----------------------------------------------------------
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Residues in contact with LEU 718 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    656C  LEU*     3.8    23.1    -      -       +      -
    658C  VAL*     3.8    15.5    -      -       +      -
    662C  GLU*     4.0    16.2    -      -       +      +
    666C  MET*     3.6    30.8    -      -       +      +
    697C  LEU*     4.1    22.7    -      -       +      -
    701C  ILE*     4.7     7.4    -      -       +      -
    714C  ARG*     2.8    52.7    +      -       +      +
    715C  PHE*     4.9     1.1    -      -       -      +
    717C  GLN*     1.3    73.8    -      -       +      +
    719C  THR*     1.3    57.4    +      -       -      +
    721C  LEU*     3.1    11.3    +      -       +      +
    722C  LEU*     3.0    26.9    +      -       -      +
----------------------------------------------------------
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Residues in contact with THR 719 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    697C  LEU*     4.4     7.6    -      -       +      -
    715C  PHE*     2.6    45.5    +      -       +      +
    716C  TYR*     3.0    17.7    +      -       -      -
    718C  LEU*     1.3    73.0    -      -       -      +
    720C  LYS*     1.3    59.2    +      -       -      +
    722C  LEU*     3.3    25.0    +      -       +      +
    723C  ASP*     3.0    30.1    +      -       -      +
    774C  PHE*     3.9    31.6    -      -       +      +
    775C  HIS*     3.8     6.6    +      -       -      -
----------------------------------------------------------
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Residues in contact with LYS 720 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    716C  TYR      3.2     8.4    +      -       -      +
    717C  GLN*     2.7    21.0    +      -       -      +
    719C  THR*     1.3    71.4    -      -       -      +
    721C  LEU*     1.3    54.0    +      -       -      +
    723C  ASP*     3.2     7.9    +      -       +      +
    724C  SER*     3.0    33.9    +      -       -      +
    775C  HIS*     3.1    44.3    -      -       +      +
----------------------------------------------------------
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Residues in contact with LEU 721 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    606C  PHE*     5.6     2.7    -      -       +      -
    649C  VAL*     5.0     9.0    -      -       +      +
    652C  GLU*     3.2    42.4    -      -       +      -
    653C  LEU*     4.2    11.0    -      -       +      +
    655C  ARG*     5.7     2.7    -      -       -      +
    656C  LEU*     3.8    23.6    -      -       +      -
    658C  VAL*     5.5     0.2    -      -       +      -
    666C  MET*     4.4    15.0    -      -       +      -
    717C  GLN      3.1     6.3    +      -       -      +
    718C  LEU*     3.1    15.2    +      -       +      +
    720C  LYS*     1.3    76.0    -      -       -      +
    722C  LEU*     1.3    61.1    +      -       -      +
    724C  SER*     3.3    16.8    +      -       -      +
    725C  MET*     3.3    31.7    +      -       -      +
----------------------------------------------------------
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Residues in contact with LEU 722 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    666C  MET*     3.6    38.4    -      -       +      +
    669C  LEU*     3.5    24.9    -      -       +      -
    670C  LEU*     3.6    26.0    -      -       +      +
    673C  SER*     5.7     1.5    -      -       -      -
    697C  LEU*     4.9     3.8    -      -       +      -
    718C  LEU      3.0    14.9    +      -       -      +
    719C  THR*     3.5    22.9    -      -       +      +
    720C  LYS      3.3     0.2    -      -       -      -
    721C  LEU*     1.3    76.3    -      -       -      +
    723C  ASP*     1.3    62.0    +      -       -      +
    725C  MET*     3.4    18.4    +      -       +      +
    726C  HIS*     3.4    14.1    +      -       -      +
    774C  PHE*     3.4    32.3    -      -       +      -
----------------------------------------------------------
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Residues in contact with ASP 723 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    719C  THR      3.0    14.4    +      -       -      +
    720C  LYS*     3.5    14.4    -      -       +      +
    721C  LEU      3.2     0.2    -      -       -      -
    722C  LEU*     1.3    76.5    -      -       -      +
    724C  SER*     1.3    61.7    +      -       -      +
    725C  MET      3.1     1.3    +      -       -      -
    726C  HIS*     3.3    24.4    +      -       -      +
    727C  GLU*     3.9     3.3    +      -       -      +
    773C  LEU*     3.2    23.9    -      -       +      +
    774C  PHE*     2.8    28.3    +      -       -      +
    775C  HIS*     2.7    41.8    +      -       -      +
----------------------------------------------------------
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Residues in contact with SER 724 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    720C  LYS*     3.0    20.3    +      -       -      +
    721C  LEU*     3.3    22.8    +      -       -      +
    723C  ASP*     1.3    73.2    -      -       -      +
    725C  MET*     1.3    60.9    +      -       -      +
    726C  HIS      3.5     0.2    -      -       -      -
    727C  GLU*     3.0    29.4    -      -       -      +
    728C  VAL*     3.1    13.4    +      -       -      +
----------------------------------------------------------
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Residues in contact with MET 725 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    602C  TYR*     3.6    34.5    -      -       +      +
    605C  ALA*     4.0    12.3    -      -       +      -
    606C  PHE*     3.9    26.0    -      -       +      +
    649C  VAL*     3.6    30.3    -      -       +      -
    670C  LEU*     3.4    32.1    -      -       +      -
    721C  LEU*     3.3    20.2    +      -       -      +
    722C  LEU*     3.4    10.3    -      -       +      +
    723C  ASP      3.1     1.0    -      -       -      -
    724C  SER*     1.3    73.4    -      -       -      +
    726C  HIS*     1.3    59.7    +      -       -      +
    727C  GLU      3.0     1.1    -      -       -      -
    728C  VAL*     3.0     9.7    +      -       +      +
    729C  VAL*     2.7    36.0    +      -       +      +
----------------------------------------------------------
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Residues in contact with HIS 726 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    602C  TYR*     3.1    32.1    +      +       -      -
    673C  SER*     3.4    39.1    -      -       -      -
    722C  LEU      3.4    14.3    +      -       -      -
    723C  ASP*     3.3    29.0    +      -       -      +
    725C  MET*     1.3    76.1    -      -       -      +
    727C  GLU*     1.3    62.1    +      -       -      +
    730C  GLU*     3.1    15.2    +      -       -      +
    771C  LYS*     3.0    50.3    +      -       +      +
    772C  LEU      3.4    18.3    +      -       -      -
    773C  LEU*     4.0    13.2    -      -       +      -
    774C  PHE*     5.7     1.6    -      -       -      -
----------------------------------------------------------
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Residues in contact with GLU 727 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    723C  ASP      3.9     2.5    +      -       -      +
    724C  SER*     3.0    24.7    +      -       -      +
    725C  MET      3.0     0.2    -      -       -      -
    726C  HIS*     1.3    81.8    -      -       -      +
    728C  VAL*     1.3    61.9    +      -       +      +
    730C  GLU*     3.4    14.6    +      -       -      +
    731C  ASN*     3.4    14.0    -      -       -      +
    771C  LYS*     5.2     0.2    -      -       -      +
----------------------------------------------------------
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Residues in contact with VAL 728 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    605C  ALA*     4.8     6.1    -      -       +      -
    645C  HIS*     3.5    37.5    -      -       +      +
    648C  TYR*     5.2     5.6    -      -       +      -
    649C  VAL*     4.4     9.4    -      -       +      -
    724C  SER*     3.9     6.7    -      -       -      +
    725C  MET*     3.0    43.7    +      -       +      +
    727C  GLU*     1.3    78.4    -      -       +      +
    729C  VAL*     1.3    62.7    +      -       +      +
    731C  ASN*     2.9    30.9    +      -       -      +
    732C  LEU*     3.1    18.6    +      -       +      +
----------------------------------------------------------
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Residues in contact with VAL 729 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    601C  MET*     3.7    18.8    -      -       +      +
    602C  TYR*     3.2    62.6    -      -       +      +
    605C  ALA*     5.4     2.0    -      -       +      -
    725C  MET*     2.7    27.6    +      -       +      +
    726C  HIS      4.2     1.1    -      -       -      +
    728C  VAL*     1.3    77.1    -      -       +      +
    730C  GLU*     1.3    56.1    +      -       -      +
    732C  LEU*     4.6     2.0    -      -       -      +
    733C  LEU*     2.8    55.8    +      -       +      +
----------------------------------------------------------
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Residues in contact with GLU 730 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    726C  HIS      3.1    20.8    +      -       -      +
    727C  GLU*     3.4     7.9    -      -       -      +
    728C  VAL      3.1     0.6    -      -       -      -
    729C  VAL*     1.3    74.1    -      -       -      +
    731C  ASN*     1.3    67.1    +      -       -      +
    733C  LEU*     4.8     2.2    -      -       -      -
    734C  ASN*     3.1    25.8    +      -       -      +
    764C  TYR*     3.9    15.4    +      -       -      +
    771C  LYS*     3.9    13.8    -      -       -      +
----------------------------------------------------------
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Residues in contact with ASN 731 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    645C  HIS*     4.2    18.0    -      -       +      +
    727C  GLU      3.4    15.3    +      -       -      +
    728C  VAL*     2.9    12.6    +      -       -      +
    730C  GLU*     1.3    76.4    -      -       -      +
    732C  LEU*     1.3    62.9    +      -       +      +
    734C  ASN*     3.7     3.3    -      -       -      +
    735C  TYR*     2.7    36.1    +      -       -      +
----------------------------------------------------------
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Residues in contact with LEU 732 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
      3C  JZN      3.4    36.8    -      -       +      -
    601C  MET*     4.1    24.7    -      -       +      -
    605C  ALA*     4.7    10.3    -      -       +      -
    642C  GLN*     4.5    13.9    -      -       +      +
    645C  HIS*     4.5    15.9    -      -       +      -
    646C  MET*     4.4    23.1    -      -       +      -
    728C  VAL*     3.1    18.0    +      -       +      +
    729C  VAL*     4.1     1.8    -      -       -      +
    731C  ASN*     1.3    83.7    -      -       +      +
    733C  LEU*     1.3    53.8    +      -       -      +
    734C  ASN      2.8    10.5    +      -       -      -
    735C  TYR*     2.8     7.2    +      -       +      +
    736C  CYS*     2.6    35.6    +      -       -      +
----------------------------------------------------------
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Residues in contact with LEU 733 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    597C  GLN      5.8     0.2    -      -       -      +
    598C  TYR*     4.2    13.2    -      -       -      +
    600C  TRP*     3.8    18.6    -      -       +      +
    601C  MET*     3.3    39.5    -      -       +      -
    602C  TYR*     5.0     1.6    -      -       +      -
    729C  VAL*     2.8    42.4    +      -       +      +
    730C  GLU*     4.4     3.4    -      -       -      +
    732C  LEU*     1.3    72.0    -      -       -      +
    734C  ASN*     1.3    55.7    +      -       -      +
    736C  CYS*     4.7     3.3    -      -       +      +
    737C  PHE*     3.4    13.0    +      -       -      +
    760C  GLN*     2.5    47.3    +      -       +      +
    764C  TYR*     5.1    12.1    -      -       +      +
----------------------------------------------------------
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Residues in contact with ASN 734 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    730C  GLU      3.1    19.7    +      -       -      +
    731C  ASN*     3.7     3.6    -      -       -      +
    732C  LEU      2.8     4.0    +      -       -      -
    733C  LEU*     1.3    73.5    -      -       -      +
    735C  TYR*     1.3    66.0    +      -       -      +
    737C  PHE*     3.3     6.1    +      -       -      +
    738C  GLN*     3.1    19.2    +      -       -      +
    760C  GLN*     4.9     0.2    -      -       -      +
    764C  TYR*     4.2    18.1    +      -       +      +
----------------------------------------------------------
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Residues in contact with TYR 735 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
      3C  JZN      4.5    29.5    -      +       +      -
    560C  MET*     3.9    12.5    -      -       +      +
    638C  GLY*     3.3    37.8    -      -       -      -
    642C  GLN*     4.5    16.6    -      -       +      -
    731C  ASN      2.7    23.7    +      -       -      +
    732C  LEU*     2.8     9.8    +      -       +      +
    734C  ASN*     1.3    71.4    -      -       -      +
    736C  CYS*     1.3    69.9    +      -       -      +
    738C  GLN*     2.9    25.8    +      -       +      +
    739C  THR*     3.6    15.6    +      -       -      -
----------------------------------------------------------
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Residues in contact with CYS 736 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
      3C  JZN      3.2    52.7    -      -       +      -
    600C  TRP*     4.8     4.9    -      -       -      -
    601C  MET*     4.7     8.1    -      -       +      -
    732C  LEU      2.6    23.1    +      -       -      +
    733C  LEU*     4.7     4.3    -      -       +      -
    735C  TYR*     1.3    80.7    -      -       -      +
    737C  PHE*     1.3    58.0    +      -       +      +
    739C  THR*     2.9    23.5    +      -       -      -
    740C  PHE*     3.4     8.3    +      -       -      +
    749C  PHE*     4.2    13.3    -      -       -      -
    757C  ILE*     4.5    10.1    -      -       -      -
----------------------------------------------------------
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Residues in contact with PHE 737 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    733C  LEU      3.4    13.9    +      -       -      +
    734C  ASN*     3.3     6.0    +      -       -      +
    735C  TYR      3.2     0.6    -      -       -      -
    736C  CYS*     1.3    77.5    -      -       +      +
    738C  GLN*     1.3    66.6    +      -       -      +
    740C  PHE*     3.1    15.7    +      +       +      -
    741C  LEU*     3.4    30.6    +      -       +      +
    757C  ILE*     3.0    56.1    -      -       +      -
    760C  GLN*     3.2    40.8    -      -       +      +
    761C  ILE*     3.2    38.1    -      -       +      -
----------------------------------------------------------
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Residues in contact with GLN 738 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    734C  ASN      3.1    10.3    +      -       -      +
    735C  TYR*     2.9    19.8    +      -       +      +
    737C  PHE*     1.3    76.8    -      -       -      +
    739C  THR*     1.3    56.3    +      -       -      +
    741C  LEU*     4.2     1.0    +      -       -      +
    742C  ASP*     3.1    24.1    +      -       -      +
----------------------------------------------------------
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Residues in contact with THR 739 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
      3C  JZN      5.2     3.8    -      -       +      +
    560C  MET*     4.6    21.3    -      -       +      -
    735C  TYR*     3.9    19.9    +      -       -      -
    736C  CYS*     2.9    11.9    +      -       -      -
    738C  GLN*     1.3    78.7    -      -       -      +
    740C  PHE*     1.3    63.5    +      -       -      +
    742C  ASP*     3.5    26.2    +      -       -      +
    747C  ILE*     4.7    16.0    +      -       +      +
    749C  PHE*     4.4    20.5    -      -       +      -
----------------------------------------------------------
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Residues in contact with PHE 740 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    736C  CYS      3.4     3.3    +      -       -      +
    737C  PHE*     3.1    16.9    +      +       +      +
    739C  THR*     1.3    80.4    -      -       -      +
    741C  LEU*     1.3    81.6    +      -       +      +
    742C  ASP      3.2     2.8    +      -       -      +
    743C  LYS*     4.9     6.8    +      -       -      +
    749C  PHE*     3.9    28.7    -      +       +      -
    754C  ALA*     4.3    23.8    -      -       +      -
    757C  ILE*     3.4    55.4    -      -       +      -
    758C  THR*     5.2     4.5    -      -       -      -
    761C  ILE*     5.8     2.0    -      -       +      -
----------------------------------------------------------
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Residues in contact with LEU 741 (chain C). Click here for Legend to table.
----------------------------------------------------------
                                  Specific contacts
                               ---------------------------
     Residue       Dist    Surf   HB    Arom    Phob    DC
----------------------------------------------------------
    737C  PHE*     3.4    22.1    +      -       +      +
    738C  GLN      4.3     1.1    -      -       -      +
    740C  PHE*     1.3   100.9    -      -       +      +
    742C  ASP*     1.3    59.7    +      -       -      +
    743C  LYS*     3.1    34.6    +      -       -      +
    761C  ILE*     4.0    27.1    -      -       +      -
----------------------------------------------------------
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A short description of the analytical approach
The contact analysis used in this page is based upon the approach developed in: Sobolev V., Wade R.C., Vriend G. and Edelman M. PROTEINS (1996) 25, 120-129. Contact legitimacy depends on the hydrophobic-hydrophilic properties of the contacting atoms. In order to define it, for each inter-atomic contact, eight atom classes have been introduced:


   I  Hydrophilic      - N and O that can donate and accept hydrogen bonds
                         (e.g., oxygen of hydroxyl group of Ser. or Thr)
  II  Acceptor         - N or O that can only accept a hydrogen bond
 III  Donor            - N that can only donate a hydrogen bond
  IV  Hydrophobic      - Cl, Br, I and all C atoms that are not in
                         aromatic rings and do not have a covalent bond to
                         a N or O atom
   V  Aromatic         - C in aromatic rings irrespective of any other 
                         bonds formed by the atom
  VI  Neutral          - C atoms that have a covalent bond to at least one
                         atom of class I or two or more atoms from class II
                         or III; atoms; S, F, P, and metal atoms in all cases
 VII  Neutral-donor    - C atoms that have a covalent bond with only one
                         atom of class III
VIII  Neutral-acceptor - C atoms that have a covalent bond with only 
                         one atom of class II
For each pair of contacts the state of legitimacy is shown below:

Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
  Atomic class           I  II  III   IV   V   VI  VII  VIII
------------------------------------------------------------
   I  (Hydrophilic)      +   +    +    -   +   +    +    +
  II  (Acceptor)         +   -    +    -   +   +    +    -
 III  (Donor)            +   +    -    -   +   +    -    +
  IV  (Hydrophobic)      -   -    -    +   +   +    +    +
   V  (Aromatic)         +   +    +    +   +   +    +    +
  VI  (Neutral)          +   +    +    +   +   +    +    +
 VII  (Neutral-donor)    +   +    -    +   +   +    -    +
VIII  (Neutral-acceptor) +   -    +    +   +   +    +    -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically assigned based on the atomic coordinates. However, in three cases (see below) the automatic assignment is currently ambiguous. In these cases, the user is advised to manually analyse the full list of contacts using LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are 
   considered "aromatic" (Class V) if the ring is approximately
   planar, and "hydrophobic" (Class IV) or "neutral" (Classes
   VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
   "hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
   "carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).

Please E-mail any questions and/or suggestions concerning this page to Vladimir.Sobolev@weizmann.ac.il