Contacts of the helix formed by residues 51 - 147 (chain J) in PDB entry 3MQ7
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with GLU 51 (chain J).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52J ALA* 1.3 78.5 + - + +
53J ALA* 4.5 2.0 - - - +
54J ARG* 3.7 37.5 - - - +
55J ASP* 3.2 30.1 - - - +
87K GLN* 4.2 14.6 - - - +
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Residues in contact with ALA 52 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51J GLU* 1.3 87.4 - - + +
53J ALA* 1.3 63.8 + - - +
54J ARG 3.2 0.4 - - - -
55J ASP* 4.1 4.2 - - - +
56J GLY* 3.2 19.2 + - - -
80K GLY* 4.0 13.0 - - - -
83K ASP* 4.3 16.6 - - + +
84K VAL* 4.4 4.0 - - + -
87K GLN* 3.6 27.6 - - - +
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Residues in contact with ALA 53 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51J GLU 5.3 1.6 - - - +
52J ALA* 1.3 78.7 - - - +
54J ARG* 1.3 57.1 + - + +
56J GLY 4.0 0.2 - - - -
57J LEU* 3.1 27.0 + - - +
84K VAL* 3.7 25.8 - - + +
87K GLN* 5.2 1.6 + - - +
81L PHE* 3.8 14.0 - - + +
84L VAL* 4.4 11.2 - - + -
85L GLU* 4.5 24.0 - - + +
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Residues in contact with ARG 54 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51J GLU* 3.7 23.8 - - - +
52J ALA 3.2 3.8 - - - +
53J ALA* 1.3 74.9 - - + +
55J ASP* 1.3 58.1 + - - +
57J LEU* 3.0 10.6 + - + +
58J ARG* 2.6 52.3 + - - +
85L GLU* 4.7 19.2 + - - +
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Residues in contact with ASP 55 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51J GLU 3.2 21.7 + - - +
52J ALA* 3.8 5.8 + - - +
54J ARG* 1.3 79.0 - - - +
56J GLY* 1.3 57.1 + - - +
58J ARG* 2.6 38.2 + - - +
59J ALA* 3.0 25.6 + - - +
76K GLU* 5.1 4.2 - - - +
80K GLY* 6.3 0.2 - - - -
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Residues in contact with GLY 56 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52J ALA 3.2 12.0 + - - -
54J ARG 3.2 0.6 - - - -
55J ASP* 1.3 75.3 - - - +
57J LEU* 1.3 65.5 + - - +
58J ARG 3.0 1.1 - - - -
59J ALA* 3.1 8.8 + - - +
60J VAL* 2.8 27.4 + - - +
76K GLU 4.6 10.1 - - - -
77K ALA* 4.6 0.8 - - - +
80K GLY* 4.7 2.2 - - - -
81L PHE* 3.8 24.9 - - - -
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Residues in contact with LEU 57 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
53J ALA 3.1 20.6 + - - +
54J ARG* 3.0 9.7 + - + +
56J GLY* 1.3 74.1 - - - +
58J ARG* 1.3 64.5 + - - +
60J VAL* 3.1 5.4 + - + +
61J MSE 3.0 47.0 + - + +
78L GLN* 3.6 43.7 - - + +
81L PHE* 3.7 19.6 - - + -
82L GLN* 4.3 16.6 - - + +
85L GLU* 5.4 7.6 - - - +
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Residues in contact with ARG 58 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54J ARG* 2.6 35.4 + - - +
55J ASP* 2.6 32.5 + - - +
57J LEU* 1.3 73.6 - - - +
59J ALA* 1.3 65.4 + - - +
61J MSE 3.0 23.4 + - + +
62J GLU* 3.1 23.5 + - + +
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Residues in contact with ALA 59 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
55J ASP 3.0 15.5 + - - +
56J GLY* 3.3 8.7 - - - +
58J ARG* 1.3 75.8 - - - +
60J VAL* 1.3 61.2 + - - +
62J GLU* 3.5 1.1 + - - +
63J ALA* 3.1 22.7 + - - +
73K GLU* 3.7 30.0 - - - +
76K GLU* 3.7 31.0 - - + +
77K ALA* 4.0 6.5 - - - +
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Residues in contact with VAL 60 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
60I VAL* 5.2 0.2 - - + -
56J GLY 2.8 22.1 + - - +
57J LEU* 3.1 7.6 + - + +
58J ARG 3.1 0.2 + - - -
59J ALA* 1.3 69.8 - - - +
61J MSE 1.3 64.7 + - - +
63J ALA* 3.3 8.0 - - - +
64J ARG* 3.1 21.7 + - - +
74K LEU* 6.3 1.1 - - + -
77K ALA* 3.9 14.8 - - + -
74L LEU* 3.4 37.8 - - + +
77L ALA* 4.4 10.3 - - + -
78L GLN* 3.9 22.0 - - + +
81L PHE* 3.8 26.0 - - + -
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Residues in contact with MSE 61 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57J LEU* 3.0 43.6 + - + +
58J ARG* 3.0 13.5 + - + +
60J VAL* 1.3 74.7 - - - +
62J GLU* 1.3 65.9 + - + +
64J ARG* 3.0 17.1 + - - +
65J ASN* 3.1 21.8 + - - +
78L GLN* 3.7 35.2 - - - +
82L GLN* 4.5 3.1 - - - +
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Residues in contact with GLU 62 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58J ARG* 3.1 24.3 + - + +
59J ALA 3.7 7.6 - - - +
61J MSE 1.3 76.7 - - + +
63J ALA* 1.3 51.6 + - - +
65J ASN* 3.1 16.5 + - - +
66J VAL* 2.7 45.7 + - - +
73K GLU* 3.8 22.7 - - - +
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Residues in contact with ALA 63 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59J ALA 3.1 11.3 + - - +
60J VAL* 3.3 14.1 - - - +
62J GLU* 1.3 78.0 - - - +
64J ARG* 1.3 57.4 + - - +
66J VAL* 3.0 6.1 + - - +
67J THR* 2.8 33.3 + - - +
70K LEU* 4.0 17.3 - - + -
73K GLU* 4.1 13.8 - - + +
74K LEU* 4.6 9.0 - - + -
74L LEU* 3.6 18.2 - - + -
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Residues in contact with ARG 64 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
60J VAL* 3.1 10.5 + - - +
61J MSE 3.0 12.7 + - - +
63J ALA* 1.3 79.0 - - - +
65J ASN* 1.3 65.5 + - - +
67J THR* 2.8 21.4 + - - -
68J HIS* 3.2 20.0 - - - -
71L GLN* 3.2 25.8 + - - +
74L LEU* 4.0 15.8 + - + -
75L THR* 2.3 49.8 + - - +
78L GLN* 2.9 29.5 + - - +
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Residues in contact with ASN 65 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61J MSE 3.1 20.7 + - - +
62J GLU* 3.4 15.2 + - - +
64J ARG* 1.3 77.9 - - - +
66J VAL* 1.3 66.2 + - + +
68J HIS* 2.9 30.0 + - - +
69J LEU* 3.5 9.2 + - + +
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Residues in contact with VAL 66 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62J GLU* 2.7 33.0 + - - +
63J ALA* 3.0 10.7 + - - +
65J ASN* 1.3 72.3 - - + +
67J THR* 1.3 63.7 + - - +
68J HIS 2.9 1.9 + - - -
69J LEU* 3.1 26.3 + - + +
70J LEU 3.2 8.1 + - - -
66K VAL* 3.2 36.0 - - + +
69K LEU* 4.4 18.2 - - + -
70K LEU* 4.2 16.4 - - + +
73K GLU* 5.1 7.4 - - + +
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Residues in contact with THR 67 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63J ALA 2.8 18.7 + - - +
64J ARG 2.8 8.5 + - - -
66J VAL* 1.3 73.1 - - - +
68J HIS* 1.3 56.4 + - - +
70J LEU* 3.4 14.8 - - - +
71J GLN* 3.1 30.3 + - - +
70K LEU* 3.8 7.2 - - + -
67L THR* 4.8 4.1 - - - -
70L LEU* 3.8 26.0 - - + -
71L GLN* 2.6 38.2 + - - -
74L LEU* 3.7 23.1 - - + -
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Residues in contact with HIS 68 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64J ARG* 3.2 31.2 - - - -
65J ASN* 2.9 18.0 + - - +
67J THR* 1.3 78.4 + - - +
69J LEU* 1.3 70.2 + - + +
70J LEU 3.1 0.9 - - - -
71J GLN* 2.9 21.2 + - - +
72J GLN* 2.9 16.0 + - - +
71L GLN* 3.6 20.7 + - - -
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Residues in contact with LEU 69 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65J ASN 4.3 8.1 - - - +
66J VAL* 3.1 21.4 + - + +
68J HIS* 1.3 78.0 - - + +
70J LEU* 1.3 65.0 + - - +
72J GLN* 2.9 27.4 + - - +
73J GLU* 3.0 17.6 + - + +
66K VAL* 4.3 20.9 - - + -
69K LEU* 5.8 6.7 - - + -
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Residues in contact with LEU 70 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
70I LEU* 2.9 39.0 - - + -
74I LEU* 4.8 1.3 - - + -
66J VAL 3.2 4.6 + - - +
67J THR* 3.4 17.0 - - - +
68J HIS 3.1 0.4 - - - -
69J LEU* 1.3 79.3 - - - +
71J GLN* 1.3 66.1 + - - +
73J GLU* 3.1 5.3 + - - +
74J LEU* 2.9 31.5 + - + +
63K ALA* 3.7 38.6 - - + +
66K VAL* 4.1 13.6 - - + +
67K THR* 3.9 10.3 - - + -
70K LEU* 4.3 16.8 - - + -
67L THR* 4.1 11.9 - - + -
70L LEU* 4.8 1.8 - - + -
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Residues in contact with GLN 71 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67J THR 3.2 14.8 - - - +
68J HIS* 2.9 16.0 + - - +
70J LEU* 1.3 76.8 - - - +
72J GLN* 1.3 63.2 + - - +
74J LEU* 3.0 9.0 + - - +
75J THR* 2.9 24.7 + - - +
64L ARG* 3.2 37.0 + - - +
67L THR* 2.8 32.8 + - - +
68L HIS* 3.6 24.8 + - - -
71L GLN* 4.8 9.7 + - - +
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Residues in contact with GLN 72 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68J HIS 2.9 11.4 + - - +
69J LEU* 2.9 22.2 + - - +
71J GLN* 1.3 73.3 - - - +
73J GLU* 1.3 62.6 + - + +
75J THR* 2.8 27.9 + - - -
76J GLU* 3.1 22.4 + - - +
----------------------------------------------------------
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Residues in contact with GLU 73 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69J LEU* 3.0 17.9 + - + +
70J LEU 3.7 6.1 - - - +
72J GLN* 1.3 78.2 - - - +
74J LEU* 1.3 58.1 + - - +
76J GLU* 3.3 27.0 + - - +
77J ALA* 3.0 27.6 + - - +
58K ARG* 5.8 0.2 - - - +
59K ALA* 3.4 37.7 - - - +
62K GLU* 3.4 32.5 - - + +
63K ALA* 4.1 13.7 - - + +
66K VAL* 4.9 6.1 - - + -
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Residues in contact with LEU 74 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
70I LEU* 4.8 0.9 - - + -
74I LEU* 4.0 22.7 - - + -
70J LEU* 2.9 23.9 + - + +
71J GLN* 3.4 9.6 - - - +
73J GLU* 1.3 75.4 - - - +
75J THR* 1.3 62.6 + - - +
77J ALA* 3.5 6.5 + - + -
78J GLN* 3.1 18.2 + - - +
60K VAL* 6.3 0.4 - - - -
63K ALA* 4.4 7.2 - - + -
60L VAL* 3.5 22.7 - - + +
63L ALA* 3.4 50.5 - - + +
64L ARG* 3.6 21.0 + - + +
67L THR* 3.7 15.7 - - + -
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Residues in contact with THR 75 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71J GLN 2.9 12.3 + - - -
72J GLN* 2.8 12.7 + - - -
74J LEU* 1.3 73.0 - - - +
76J GLU* 1.3 67.0 + - + +
78J GLN* 3.0 5.7 + - + +
79J LYS* 3.0 21.9 + - + +
64L ARG* 2.5 30.8 + - - +
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Residues in contact with GLU 76 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72J GLN* 3.1 22.3 + - - +
73J GLU* 3.3 34.1 + - - +
75J THR* 1.3 74.6 - - + +
77J ALA* 1.3 64.9 + - - +
79J LYS* 3.1 13.0 + - + +
80J GLY* 3.0 19.6 + - - -
55K ASP* 4.7 13.0 - - + +
56K GLY* 4.6 2.6 + - - -
58K ARG* 5.6 6.1 + - - +
59K ALA* 3.7 13.8 - - + +
----------------------------------------------------------
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Residues in contact with ALA 77 (chain J).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81I PHE* 3.5 10.1 - - + -
73J GLU 3.0 16.5 + - - +
74J LEU* 3.7 10.5 - - + +
75J THR 3.2 0.4 - - - -
76J GLU* 1.3 77.3 - - - +
78J GLN* 1.3 62.3 + - - +
80J GLY 3.3 7.8 + - - -
81J PHE* 3.4 13.1 + - - -
56K GLY* 4.3 5.8 - - - -
59K ALA* 3.7 9.1 - - + +
60K VAL* 3.9 27.8 - - + +
60L VAL* 3.9 18.2 - - + -
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Residues in contact with GLN 78 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97B ALA* 5.7 2.2 - - - +
74J LEU 3.1 12.4 + - - +
75J THR* 3.0 11.2 + - + +
77J ALA* 1.3 74.5 - - - +
79J LYS* 1.3 65.9 + - - +
80J GLY 3.4 0.2 + - - -
81J PHE 3.5 0.7 + - - -
82J GLN* 3.0 47.3 + - - +
57L LEU* 3.9 13.5 - - + +
60L VAL* 4.0 11.2 - - + +
61L MSE 3.3 32.1 - - - +
64L ARG* 2.8 27.5 + - - +
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Residues in contact with LYS 79 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75J THR* 3.0 12.2 + - + +
76J GLU* 3.3 13.9 - - + +
78J GLN* 1.3 74.9 - - - +
80J GLY* 1.3 62.4 + - - +
82J GLN* 3.2 21.5 + - - +
83J ASP* 3.2 37.1 + - - +
55K ASP* 6.1 0.7 - - - -
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Residues in contact with GLY 80 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81I PHE* 3.9 11.0 - - - -
76J GLU 3.0 12.5 + - - -
77J ALA 3.3 4.4 + - - -
79J LYS* 1.3 77.1 - - - +
81J PHE* 1.3 61.2 + - - +
83J ASP* 3.6 3.9 + - - +
84J VAL* 3.3 25.3 + - - +
52K ALA* 3.5 25.8 - - - +
55K ASP* 5.8 1.8 - - - -
56K GLY* 4.3 3.6 - - - -
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Residues in contact with PHE 81 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93B HIS* 5.0 1.6 + - - -
77I ALA* 3.5 18.8 - - - -
80I GLY 3.7 7.0 - - - -
81I PHE* 3.4 55.6 - + - -
84I VAL* 4.7 3.6 - - + -
77J ALA 3.4 11.2 + - - -
78J GLN 3.5 0.6 + - - +
79J LYS 3.3 0.6 - - - -
80J GLY* 1.3 73.3 - - - +
82J GLN* 1.3 66.1 + - - +
84J VAL* 3.2 14.4 + - + +
85J GLU* 3.3 15.1 + - - +
53L ALA* 3.6 35.0 - - + +
56L GLY* 3.4 30.3 - - - -
57L LEU* 3.7 32.3 - - + -
60L VAL* 4.0 12.3 - - + -
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Residues in contact with GLN 82 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93B HIS* 4.2 31.2 + - + +
78J GLN* 3.0 46.4 + - - +
79J LYS* 3.2 13.8 + - - +
81J PHE* 1.3 77.5 - - - +
83J ASP* 1.3 67.2 + - - +
85J GLU* 3.7 3.3 + - - +
86J ALA* 3.7 14.9 + - - +
57L LEU* 4.1 11.2 - - + -
61L MSE 4.2 5.9 - - - +
----------------------------------------------------------
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Residues in contact with ASP 83 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
79J LYS* 3.2 34.8 + - - +
80J GLY* 3.8 2.9 - - - +
82J GLN* 1.3 79.5 - - - +
84J VAL* 1.3 62.9 + - - +
86J ALA* 3.1 22.2 + - - +
87J GLN* 3.2 20.1 + - - +
52K ALA* 3.7 28.0 - - + +
----------------------------------------------------------
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Residues in contact with VAL 84 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81I PHE* 5.1 2.7 - - + -
84I VAL* 3.4 48.7 - - + -
80J GLY 3.3 14.3 + - - +
81J PHE* 3.2 13.3 + - - +
83J ASP* 1.3 74.2 - - - +
85J GLU* 1.3 69.6 + - - +
87J GLN* 2.9 27.4 + - - +
88J ALA* 3.0 17.3 + - + +
52K ALA* 4.8 0.9 - - + -
53K ALA* 4.1 21.8 - - + +
53L ALA* 4.4 5.2 - - + -
----------------------------------------------------------
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Residues in contact with GLU 85 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89B ALA* 3.4 36.8 - - + +
92B ASN* 4.7 5.2 - - - +
93B HIS* 3.2 39.5 + - + +
81J PHE 3.3 7.9 + - - +
82J GLN 4.2 1.3 - - - +
83J ASP 3.5 0.4 - - - -
84J VAL* 1.3 82.2 - - - +
86J ALA* 1.3 63.7 + - - +
88J ALA* 3.6 10.2 + - - +
89J ALA* 4.0 9.2 + - - +
51L GLU 4.9 4.7 + - - -
53L ALA* 4.5 17.0 - - + +
54L ARG* 4.6 17.1 + - - +
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Residues in contact with ALA 86 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89B ALA* 6.3 1.1 - - - -
82J GLN 3.7 8.6 + - - +
83J ASP* 3.1 13.8 + - - +
84J VAL 3.0 0.4 - - - -
85J GLU* 1.3 81.7 - - - +
87J GLN* 1.3 66.3 + - + +
88J ALA 3.0 1.9 + - - -
89J ALA* 3.3 12.5 + - - +
90J THR* 4.1 7.1 + - - -
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Residues in contact with GLN 87 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
83J ASP* 3.2 20.3 + - - +
84J VAL* 2.9 16.9 + - - +
86J ALA* 1.3 80.0 - - + +
88J ALA* 1.3 60.2 + - - +
89J ALA 3.4 0.6 + - - -
90J THR* 3.6 16.7 + - - -
91J ALA* 3.8 10.2 + - - +
51K GLU* 4.7 17.7 + - - +
52K ALA* 4.1 25.1 + - - +
53K ALA 5.5 0.7 + - - -
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Residues in contact with ALA 88 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
84J VAL* 3.0 18.3 + - + +
85J GLU* 4.1 9.4 - - - +
86J ALA 3.0 1.0 + - - -
87J GLN* 1.3 77.9 - - - +
89J ALA* 1.3 63.6 + - - +
90J THR 3.4 0.3 + - - -
91J ALA* 3.6 7.2 + - - +
92J ASN* 3.4 28.3 + - - +
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Residues in contact with ALA 89 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85B GLU* 3.2 35.2 - - + +
85J GLU 4.0 5.4 + - - +
86J ALA 3.3 10.3 + - - +
88J ALA* 1.3 75.4 - - - +
90J THR* 1.3 67.9 + - - +
92J ASN* 3.4 9.1 + - - +
93J HIS* 3.2 33.0 + - + +
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Residues in contact with THR 90 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86J ALA 4.1 6.2 + - - -
87J GLN* 3.6 12.1 + - - -
88J ALA 3.2 0.6 - - - -
89J ALA* 1.3 78.8 - - - +
91J ALA* 1.3 65.6 + - - +
93J HIS* 2.9 26.3 + - + +
94J THR* 3.1 19.0 + - - +
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Residues in contact with ALA 91 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
88I ALA* 6.0 1.1 - - - -
91I ALA* 3.7 30.1 - - + -
92I ASN* 5.6 4.5 - - - +
95I VAL* 4.3 5.5 - - + +
87J GLN 3.8 7.6 + - - +
88J ALA* 3.6 10.4 + - - +
89J ALA 3.4 0.4 - - - -
90J THR* 1.3 81.1 - - - +
92J ASN* 1.3 57.5 + - - +
94J THR* 3.4 7.9 + - - -
95J VAL* 3.0 32.0 + - - +
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Residues in contact with ASN 92 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85B GLU* 5.8 1.9 + - - +
54D ARG* 3.6 30.8 + - - +
91I ALA* 5.7 4.1 - - - +
88J ALA* 3.4 21.0 + - - +
89J ALA* 3.4 10.1 + - - +
90J THR 3.2 1.0 - - - -
91J ALA* 1.3 77.3 - - - +
93J HIS* 1.3 58.1 + - + +
95J VAL* 3.3 11.6 + - - +
96J MSE 2.9 47.3 + - + +
----------------------------------------------------------
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Residues in contact with HIS 93 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82B GLN* 4.0 33.5 + - + +
85B GLU* 2.9 29.4 + - - +
57D LEU* 3.1 27.7 - - + +
61D MSE 3.8 13.4 - - + +
89J ALA* 3.2 25.8 + - - +
90J THR* 2.9 14.2 + - + +
92J ASN* 1.3 72.0 - - + +
94J THR* 1.3 57.6 + - - +
96J MSE 3.3 15.2 + - + +
97J ALA* 2.7 36.1 + - - +
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Residues in contact with THR 94 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95I VAL* 4.0 29.2 - - + -
90J THR* 3.1 18.2 + - - +
91J ALA* 3.6 9.2 - - - -
93J HIS* 1.3 77.0 - - - +
95J VAL* 1.3 67.0 + - - +
97J ALA* 3.1 7.7 + - + +
98J LEU* 2.8 35.5 + - + +
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Residues in contact with VAL 95 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
91I ALA* 4.3 6.7 - - + +
94I THR* 3.8 33.2 - - + -
95I VAL* 3.7 21.8 - - + +
98I LEU* 3.7 6.9 - - + +
91J ALA 3.0 19.9 + - - +
92J ASN* 3.3 15.5 + - - +
94J THR* 1.3 77.7 - - - +
96J MSE 1.3 60.2 + - + +
98J LEU* 3.1 3.7 + - - +
99J MSE 2.9 44.9 + - - +
----------------------------------------------------------
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Residues in contact with MSE 96 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54D ARG* 4.4 38.1 - - + +
57D LEU* 4.3 12.8 - - + -
58D ARG* 4.5 30.6 - - + +
61D MSE 3.9 11.6 - - - +
92J ASN* 2.9 53.2 + - + +
93J HIS* 3.4 32.5 - - + +
95J VAL* 1.3 76.9 - - + +
97J ALA* 1.3 66.6 + - - +
99J MSE 3.3 12.8 + - - +
100J ALA* 3.0 23.4 + - - +
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Residues in contact with ALA 97 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61D MSE 3.7 20.3 - - + -
65D ASN* 5.1 0.5 + - - -
93J HIS 2.7 20.0 + - - +
94J THR* 3.5 8.1 - - + +
96J MSE 1.3 71.0 - - - +
98J LEU* 1.3 67.1 + - + +
100J ALA* 3.2 9.2 + - - +
101J SER* 2.9 23.5 + - - -
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Residues in contact with LEU 98 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95I VAL* 3.6 29.8 - - + +
98I LEU* 3.9 21.0 - - + +
99I MSE 3.5 37.0 - - + -
102I LEU* 4.6 21.4 - - + +
94J THR* 2.8 31.0 + - + +
95J VAL 3.6 3.6 - - - +
97J ALA* 1.3 73.9 - - + +
99J MSE 1.3 56.1 + - - +
101J SER* 3.0 11.5 + - - +
102J LEU* 2.9 29.1 + - - +
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Residues in contact with MSE 99 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58D ARG* 6.2 2.2 - - - +
94I THR* 6.2 0.2 - - - -
98I LEU* 3.9 22.9 - - + -
95J VAL* 2.9 36.0 + - - +
96J MSE 3.6 14.4 - - - +
98J LEU* 1.3 75.7 - - - +
100J ALA* 1.3 58.3 + - - +
102J LEU* 3.1 7.4 + - - +
103J ASP* 2.9 39.3 + - - +
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Residues in contact with ALA 100 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61D MSE 4.4 15.3 - - + +
62D GLU* 4.9 12.1 - - + -
65D ASN* 3.4 24.1 + - - +
96J MSE 3.0 12.6 + - - +
97J ALA* 3.2 13.0 - - - +
99J MSE 1.3 75.5 - - - +
101J SER* 1.3 62.0 + - - +
103J ASP* 3.4 6.1 + - - +
104J ALA* 3.0 24.1 + - - +
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Residues in contact with SER 101 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65D ASN* 4.1 15.2 + - - -
102I LEU* 4.1 21.6 - - - +
97J ALA 2.9 16.7 + - - -
98J LEU* 3.0 15.1 + - - +
100J ALA* 1.3 72.9 - - - +
102J LEU* 1.3 57.9 + - - +
104J ALA* 3.4 2.6 + - - +
105J GLU* 2.8 30.3 + - - +
----------------------------------------------------------
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Residues in contact with LEU 102 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
98I LEU* 4.4 17.3 - - + +
101I SER* 3.9 25.1 - - - +
102I LEU* 3.6 39.5 - - + +
105I GLU* 4.1 14.1 - - + -
98J LEU 2.9 15.8 + - - +
99J MSE 3.1 7.4 + - - +
101J SER* 1.3 73.8 - - - +
103J ASP* 1.3 67.7 + - - +
105J GLU* 4.3 0.2 - - - -
106J LYS* 3.0 51.9 + - + +
----------------------------------------------------------
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Residues in contact with ASP 103 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62D GLU* 5.6 2.1 - - - +
99J MSE 2.9 23.5 + - - +
100J ALA* 3.9 6.1 + - - +
102J LEU* 1.3 78.7 - - - +
104J ALA* 1.3 62.0 + - - +
106J LYS* 3.2 11.7 + - - +
107J ALA* 3.0 23.4 + - - +
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Residues in contact with ALA 104 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65D ASN* 4.1 24.0 - - + +
69D LEU* 5.0 17.4 - - + +
100J ALA 3.0 18.1 + - - +
101J SER* 3.5 5.6 - - - +
103J ASP* 1.3 77.3 - - - +
105J GLU* 1.3 61.6 + - - +
106J LYS 3.2 1.0 + - - -
107J ALA* 3.2 16.2 + - - +
108J GLN* 3.2 13.7 + - - +
----------------------------------------------------------
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Residues in contact with GLU 105 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
102I LEU* 3.9 13.5 - - + -
105I GLU* 3.9 21.8 - - + +
106I LYS* 3.3 52.9 + - + +
101J SER 2.8 20.2 + - - +
102J LEU 3.4 4.5 + - - +
103J ASP 3.3 0.2 - - - -
104J ALA* 1.3 73.0 - - - +
106J LYS* 1.3 60.7 + - - +
108J GLN* 3.3 31.8 + - - +
109J GLY* 3.5 15.8 + - - -
----------------------------------------------------------
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Residues in contact with LYS 106 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
105I GLU* 3.6 35.9 + - + +
102J LEU* 3.0 44.3 + - + +
103J ASP* 3.7 11.2 - - - +
105J GLU* 1.3 75.4 - - - +
107J ALA* 1.3 66.1 + - - +
108J GLN 3.1 1.6 - - - -
109J GLY* 3.5 0.5 + - - -
110J GLN* 3.0 27.0 + - - +
----------------------------------------------------------
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Residues in contact with ALA 107 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69D LEU* 5.8 8.7 - - + -
103J ASP 3.0 13.1 + - - +
104J ALA* 3.2 11.4 + - - +
106J LYS* 1.3 76.0 - - - +
108J GLN* 1.3 62.8 + - - +
110J GLN* 3.8 13.1 + - - +
111J LYS* 3.1 26.2 + - - +
----------------------------------------------------------
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Residues in contact with GLN 108 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69D LEU* 5.8 7.1 - - + +
72D GLN* 5.1 6.2 - - - +
104J ALA 3.2 11.7 + - - +
105J GLU* 3.3 31.3 + - - +
106J LYS 3.1 0.4 - - - -
107J ALA* 1.3 80.9 - - - +
109J GLY* 1.3 59.2 + - - +
111J LYS* 3.3 5.5 + - - +
112J LYS* 2.8 35.1 + - + +
----------------------------------------------------------
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Residues in contact with GLY 109 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
105I GLU* 5.4 5.2 - - - -
109I GLY* 5.7 9.2 - - - -
105J GLU 3.5 8.1 + - - -
106J LYS* 3.5 4.4 + - - -
107J ALA 3.4 0.4 - - - -
108J GLN* 1.3 80.9 - - - +
110J GLN* 1.3 51.7 + - - +
112J LYS* 3.2 5.6 + - - +
113J VAL* 2.6 45.1 + - - +
----------------------------------------------------------
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Residues in contact with GLN 110 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106J LYS 3.0 19.5 + - - +
107J ALA* 3.8 11.2 + - - +
109J GLY* 1.3 73.9 - - - +
111J LYS* 1.3 58.9 + - - +
113J VAL* 3.5 8.2 + - - +
114J GLU* 2.9 30.7 + - + +
----------------------------------------------------------
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Residues in contact with LYS 111 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62A GLU* 2.7 38.3 + - - +
69D LEU* 6.3 0.8 - - - +
73D GLU* 2.9 18.6 + - - -
107J ALA 3.1 17.5 + - - +
108J GLN* 3.8 5.4 - - - +
110J GLN* 1.3 76.2 - - - +
112J LYS* 1.3 66.4 + - - +
114J GLU* 3.1 11.6 + - + +
115J GLU* 2.9 24.7 + - - +
----------------------------------------------------------
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Residues in contact with LYS 112 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113I VAL* 4.1 31.0 - - + -
117I GLU* 5.7 3.1 - - - -
108J GLN* 2.8 23.4 + - + +
109J GLY* 3.6 7.0 - - - +
111J LYS* 1.3 75.1 - - - +
113J VAL* 1.3 63.7 + - + +
115J GLU* 3.2 29.2 + - - +
116J LEU* 3.1 45.4 + - + +
----------------------------------------------------------
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Residues in contact with VAL 113 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109I GLY* 6.4 1.3 - - - -
112I LYS* 3.9 33.2 - - + -
113I VAL* 6.0 3.4 - - + +
116I LEU* 4.2 13.7 - - + -
109J GLY* 2.6 27.3 + - - +
110J GLN* 3.7 7.4 - - - +
112J LYS* 1.3 74.5 - - + +
114J GLU* 1.3 61.0 + - - +
116J LEU* 4.3 1.2 - - + +
117J GLU* 3.1 49.3 + - + +
----------------------------------------------------------
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Residues in contact with GLU 114 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
110J GLN* 2.9 18.5 + - + +
111J LYS* 3.1 17.3 - - + +
113J VAL* 1.3 77.6 - - - +
115J GLU* 1.3 63.1 + - - +
117J GLU* 3.7 11.8 - - - +
118J GLY* 3.0 19.6 + - - -
----------------------------------------------------------
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Residues in contact with GLU 115 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
111J LYS* 2.9 14.0 + - + +
112J LYS* 3.2 37.6 + - - +
114J GLU* 1.3 76.1 - - - +
116J LEU* 1.3 65.2 + - + +
118J GLY* 3.2 3.9 + - - -
119J GLU* 3.1 38.6 + - + +
----------------------------------------------------------
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Residues in contact with LEU 116 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113I VAL* 4.2 26.7 - - + +
116I LEU* 3.9 38.4 - - + -
117I GLU* 4.6 12.8 - - + +
120I ILE* 4.0 17.9 - - + +
112J LYS* 3.1 39.3 + - + +
113J VAL* 5.0 0.7 - - + -
115J GLU* 1.3 81.5 - - + +
117J GLU* 1.3 60.5 + - - +
119J GLU* 3.0 19.7 + - - +
120J ILE* 2.8 34.1 + - - +
----------------------------------------------------------
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Residues in contact with GLU 117 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112I LYS* 5.5 3.5 - - - -
116I LEU* 4.3 16.6 - - + +
113J VAL* 3.1 43.3 + - + +
114J GLU* 3.7 11.6 - - - +
116J LEU* 1.3 76.6 - - - +
118J GLY* 1.3 55.8 + - - +
120J ILE* 3.7 9.5 - - + +
121J THR* 3.1 35.5 + - + +
----------------------------------------------------------
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Residues in contact with GLY 118 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
114J GLU 3.0 13.9 + - - -
115J GLU* 3.6 4.5 - - - -
116J LEU 3.1 0.2 - - - -
117J GLU* 1.3 74.7 - - - +
119J GLU* 1.3 64.5 + - - +
121J THR* 3.1 18.8 + - - -
122J THR* 3.1 16.9 + - - -
----------------------------------------------------------
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Residues in contact with GLU 119 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120I ILE* 4.1 28.7 - - + +
115J GLU* 3.1 33.4 + - + +
116J LEU* 3.0 16.5 + - - +
118J GLY* 1.3 74.2 - - - +
120J ILE* 1.3 62.7 + - - +
122J THR* 3.3 8.9 + - - -
123J LEU* 3.0 33.7 + - + +
----------------------------------------------------------
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Residues in contact with ILE 120 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
116I LEU* 3.6 46.2 - - + +
119I GLU* 4.4 20.9 - - + +
120I ILE* 3.7 19.3 - - + +
123I LEU* 4.3 12.0 - - + +
116J LEU 2.8 25.1 + - - +
117J GLU* 3.7 10.5 - - + +
118J GLY 3.2 0.2 - - - -
119J GLU* 1.3 73.4 - - - +
121J THR* 1.3 67.8 + - + +
123J LEU* 3.3 7.4 + - - +
124J ASN* 3.0 37.1 + - - +
----------------------------------------------------------
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Residues in contact with THR 121 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
117J GLU* 3.1 16.4 + - + +
118J GLY* 3.1 15.8 + - - -
120J ILE* 1.3 79.6 - - + +
122J THR* 1.3 60.2 + - - +
124J ASN* 3.4 12.8 + - - +
125J HIS* 3.1 37.7 + - - -
----------------------------------------------------------
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Residues in contact with THR 122 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
118J GLY 3.1 14.5 + - - -
119J GLU* 3.4 10.8 - - - -
121J THR* 1.3 73.5 + - - +
123J LEU* 1.3 78.0 + - + +
125J HIS* 3.3 9.6 + - - +
126J LYS* 3.1 42.3 + - - +
----------------------------------------------------------
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Residues in contact with LEU 123 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120I ILE* 4.1 29.2 - - + +
123I LEU* 4.3 19.0 - - + +
124I ASN* 4.0 27.8 - - - +
127I LEU* 4.8 11.2 - - + +
119J GLU* 3.0 28.0 + - + +
120J ILE* 3.3 5.4 + - - +
122J THR* 1.3 90.1 - - + +
124J ASN* 1.3 63.1 + - - +
126J LYS* 3.3 17.0 + - + +
127J LEU* 3.0 24.6 + - - +
----------------------------------------------------------
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Residues in contact with ASN 124 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
123I LEU* 3.8 23.0 - - - +
120J ILE* 3.0 35.9 + - - +
121J THR* 3.5 13.8 - - - +
122J THR 3.2 0.2 - - - -
123J LEU* 1.3 75.9 - - - +
125J HIS* 1.3 60.7 + - + +
127J LEU* 3.2 13.6 + - - +
128J GLN* 2.9 30.7 + - - +
----------------------------------------------------------
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Residues in contact with HIS 125 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
121J THR* 3.1 27.0 + - - -
122J THR* 3.3 9.4 + - - +
124J ASN* 1.3 77.2 - - + +
126J LYS* 1.3 60.7 + - + +
128J GLN* 3.3 43.8 + - - +
129J ASP* 3.6 12.1 + - - +
----------------------------------------------------------
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Residues in contact with LYS 126 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127I LEU* 3.7 26.6 - - + +
122J THR* 3.1 34.8 + - + +
123J LEU* 3.7 15.7 - - + +
124J ASN 3.2 0.2 - - - -
125J HIS* 1.3 74.1 - - + +
127J LEU* 1.3 64.8 + - - +
128J GLN 3.2 0.4 - - - -
129J ASP* 3.5 7.7 + - - +
130J ALA* 3.3 21.0 + - - +
----------------------------------------------------------
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Residues in contact with LEU 127 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
123I LEU* 4.6 11.2 - - + +
126I LYS* 3.8 25.8 - - + +
127I LEU* 3.5 43.2 - - + +
130I ALA* 4.4 9.2 - - + -
123J LEU 3.0 13.3 + - - +
124J ASN* 3.5 18.6 - - - +
126J LYS* 1.3 75.1 - - - +
128J GLN* 1.3 58.9 + - - +
130J ALA* 3.3 1.4 + - - +
131J SER* 2.8 41.3 + - - +
----------------------------------------------------------
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Residues in contact with GLN 128 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
124J ASN* 2.9 16.2 + - - +
125J HIS* 3.3 38.1 + - - +
126J LYS 3.2 0.4 - - - -
127J LEU* 1.3 74.1 - - - +
129J ASP* 1.3 58.3 + - - +
131J SER* 3.0 7.7 + - - -
132J ALA* 2.8 35.6 + - - +
----------------------------------------------------------
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Residues in contact with ASP 129 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
125J HIS 3.6 8.7 + - - +
126J LYS* 3.5 9.2 + - - +
127J LEU 3.4 0.2 - - - -
128J GLN* 1.3 83.1 + - - +
130J ALA* 1.3 57.4 + - - +
132J ALA* 3.2 8.9 + - - +
133J GLU* 2.9 28.5 + - - +
----------------------------------------------------------
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Residues in contact with ALA 130 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127I LEU* 4.2 15.0 - - + -
130I ALA* 4.2 19.1 - - + +
131I SER* 4.9 6.3 - - - +
134I VAL* 3.7 4.6 - - + +
126J LYS 3.3 14.2 + - - +
127J LEU 3.7 4.5 - - - +
128J GLN 3.2 0.8 - - - -
129J ASP* 1.3 79.0 - - - +
131J SER* 1.3 56.9 + - - +
133J GLU* 3.4 8.2 + - - +
134J VAL* 3.0 33.1 + - - +
----------------------------------------------------------
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Residues in contact with SER 131 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130I ALA* 5.0 5.7 - - - +
127J LEU* 2.8 28.5 + - - +
128J GLN* 3.6 5.2 - - - -
130J ALA* 1.3 72.5 - - - +
132J ALA* 1.3 60.8 + - - +
133J GLU 3.1 1.6 - - - -
134J VAL* 4.0 7.7 - - - +
135J GLU* 3.1 29.3 + - - +
----------------------------------------------------------
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Residues in contact with ALA 132 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128J GLN 2.8 13.4 + - - +
129J ASP* 3.4 13.5 - - - +
131J SER* 1.3 76.7 - - - +
133J GLU* 1.3 60.4 + - - +
135J GLU* 4.1 4.5 - - - +
136J ARG* 3.3 24.3 + - - +
----------------------------------------------------------
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Residues in contact with GLU 133 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
134I VAL* 3.8 17.5 - - + -
138I ARG* 3.2 28.4 + - - +
129J ASP 2.9 15.8 + - - +
130J ALA* 3.5 9.4 - - - +
132J ALA* 1.3 75.2 - - - +
134J VAL* 1.3 59.7 + - - +
135J GLU 3.3 0.2 - - - -
136J ARG* 2.8 42.7 + - - +
137J LEU* 2.9 39.4 + - + +
----------------------------------------------------------
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Residues in contact with VAL 134 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130I ALA* 3.4 19.3 - - + +
133I GLU* 3.9 14.6 - - + -
134I VAL* 3.4 25.6 - - + +
137I LEU* 4.2 5.6 - - + +
130J ALA 3.0 22.3 + - - +
131J SER* 3.6 7.2 + - - +
133J GLU* 1.3 75.2 - - - +
135J GLU* 1.3 59.0 + - - +
137J LEU* 3.2 5.8 + - - +
138J ARG* 2.8 62.7 + - - +
----------------------------------------------------------
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Residues in contact with GLU 135 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
131J SER 3.1 15.4 + - - +
132J ALA* 4.1 5.2 - - - +
133J GLU 3.3 0.2 - - - -
134J VAL* 1.3 81.6 - - - +
136J ARG* 1.3 56.9 + - - +
138J ARG* 3.3 32.1 + - - +
139J ARG* 3.1 61.3 + - - +
----------------------------------------------------------
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Residues in contact with ARG 136 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
138I ARG* 4.8 3.8 - - - +
132J ALA 3.3 14.5 + - - +
133J GLU* 2.8 53.6 + - - +
134J VAL 3.2 0.4 - - - -
135J GLU* 1.3 77.7 - - - +
137J LEU* 1.3 78.1 + - - +
139J ARG* 3.4 21.2 + - - +
140J GLU* 3.1 37.6 + - - +
----------------------------------------------------------
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Residues in contact with LEU 137 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
134I VAL* 3.4 36.1 - - + +
137I LEU* 4.0 22.2 - - + +
138I ARG* 3.9 26.5 - - + +
141I ASN* 3.6 6.5 + - - +
133J GLU* 2.9 26.8 + - - +
134J VAL* 3.8 3.8 - - - +
136J ARG* 1.3 104.5 - - - +
138J ARG* 1.3 58.6 + - - +
140J GLU* 3.4 22.3 + - - +
141J ASN* 2.9 29.9 + - - +
----------------------------------------------------------
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Residues in contact with ARG 138 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
133I GLU* 4.0 19.2 + - - +
137I LEU* 4.2 14.3 - - + +
134J VAL* 2.8 41.1 + - - +
135J GLU* 3.5 30.4 + - - +
136J ARG 3.3 0.2 - - - -
137J LEU* 1.3 74.5 - - - +
139J ARG* 1.3 59.8 + - - +
141J ASN* 3.2 7.7 + - + +
142J GLN* 2.9 34.5 + - - +
----------------------------------------------------------
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Residues in contact with ARG 139 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132J ALA 5.5 0.2 + - - -
135J GLU* 3.1 41.3 + - - +
136J ARG* 3.4 35.1 - - - +
137J LEU 3.4 0.2 - - - -
138J ARG* 1.3 75.2 - - - +
140J GLU* 1.3 64.1 + - - +
142J GLN* 3.0 13.2 + - - +
143J VAL* 3.0 30.1 + - + +
----------------------------------------------------------
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Residues in contact with GLU 140 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
141I ASN* 3.0 24.1 - - - +
136J ARG* 3.1 24.1 + - - +
137J LEU* 3.4 28.2 - - - +
139J ARG* 1.3 78.4 - - - +
141J ASN* 1.3 62.4 + - - +
143J VAL* 3.5 7.7 + - - +
144J LEU* 3.3 31.6 + - + +
----------------------------------------------------------
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Residues in contact with ASN 141 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
137I LEU* 3.8 19.5 + - + +
140I GLU* 4.0 24.0 + - - +
141I ASN* 2.8 35.2 - - - +
144I LEU* 4.2 11.7 - - - +
137J LEU 2.9 16.9 + - - +
138J ARG* 3.3 10.3 - - + +
140J GLU* 1.3 75.2 - - - +
142J GLN* 1.3 64.7 + - - +
144J LEU* 3.0 15.7 + - - +
145J SER* 3.0 18.4 + - - -
----------------------------------------------------------
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Residues in contact with GLN 142 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
138J ARG* 2.9 19.6 + - - +
139J ARG* 3.5 9.8 - - - +
141J ASN* 1.3 75.9 - - - +
143J VAL* 1.3 59.9 + - + +
145J SER* 3.3 8.4 + - - +
146J VAL* 3.0 38.5 + - + +
----------------------------------------------------------
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Residues in contact with VAL 143 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
139J ARG* 3.0 20.3 + - + +
140J GLU* 3.8 9.4 - - - +
141J ASN 3.2 0.2 - - - -
142J GLN* 1.3 77.8 - - + +
144J LEU* 1.3 66.2 + - + +
146J VAL* 3.7 8.2 - - - +
147J ARG* 3.5 17.2 + - - +
----------------------------------------------------------
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Residues in contact with LEU 144 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
141I ASN* 3.4 48.7 - - - +
144I LEU* 4.2 20.5 - - + +
145I SER* 4.5 15.0 - - - +
148I ILE* 4.1 22.8 - - + +
140J GLU* 3.3 15.9 + - + +
141J ASN 3.0 7.6 + - - +
143J VAL* 1.3 82.0 - - + +
145J SER* 1.3 57.5 + - - +
147J ARG* 2.8 27.2 + - + +
148J ILE* 3.5 9.0 + - - +
----------------------------------------------------------
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Residues in contact with SER 145 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
144I LEU* 4.5 14.1 - - - +
141J ASN* 3.0 14.8 + - - -
142J GLN* 3.3 15.8 + - - +
144J LEU* 1.3 73.1 - - - +
146J VAL* 1.3 66.2 + - - +
147J ARG 3.1 1.3 - - - -
148J ILE* 3.3 8.9 + - - +
149J ALA* 3.2 26.9 + - - +
----------------------------------------------------------
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Residues in contact with VAL 146 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
142J GLN* 3.0 29.4 - - + +
143J VAL* 3.7 9.6 - - - +
145J SER* 1.3 80.2 + - - +
147J ARG* 1.3 55.7 + - - +
148J ILE 3.1 5.7 + - - -
149J ALA* 3.8 16.1 + - - +
----------------------------------------------------------
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Residues in contact with ARG 147 (chain J).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
148I ILE* 3.1 56.9 + - + +
143J VAL* 3.5 7.5 + - + +
144J LEU* 2.8 20.8 + - + +
146J VAL* 1.3 77.3 - - - +
148J ILE* 1.3 59.2 + - - +
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il