Contacts of the helix formed by residues 25 - 101 (chain B) in PDB entry 4BPK
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with SER 25 (chain B).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
23B SER* 2.7 18.5 + - - -
24B TRP* 1.3 100.8 + - - +
26B GLN* 1.3 60.2 + - - +
83B MET* 3.5 8.9 + - - +
84B ALA* 3.1 18.7 + - - +
85B ALA* 3.0 17.0 + - - +
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Residues in contact with GLN 26 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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25B SER* 1.3 74.4 - - - +
83B MET* 1.3 68.6 + - - +
85B ALA* 3.1 9.3 + - + +
86B VAL* 3.0 40.0 + - - +
188B TRP* 4.3 2.2 - - - +
189B ASP* 3.5 43.2 + - + +
192B VAL* 5.3 1.0 - - + +
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Residues in contact with MET 83 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
4A SER* 3.9 40.8 - - - +
7A GLU* 4.5 9.6 - - - +
8A LEU* 4.9 11.0 - - + -
25B SER* 3.3 7.9 + - - +
26B GLN* 1.3 84.1 + - - +
84B ALA* 1.3 58.3 + - - +
86B VAL* 3.3 10.5 + - + +
87B LYS* 2.9 64.0 + - - +
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Residues in contact with ALA 84 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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14B SER* 4.1 15.9 - - - +
23B SER* 4.8 0.7 - - - -
24B TRP* 4.0 18.4 - - + +
25B SER* 3.1 30.5 + - - +
83B MET* 1.3 77.1 - - - +
85B ALA* 1.3 57.8 + - - +
87B LYS* 3.4 12.1 + - - +
88B GLN* 3.1 29.1 + - - +
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Residues in contact with ALA 85 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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23B SER* 3.9 16.5 + - - +
25B SER 3.0 12.7 + - - +
26B GLN* 3.1 12.5 + - + +
84B ALA* 1.3 75.2 - - - +
86B VAL* 1.3 60.7 + - - +
88B GLN* 3.5 4.7 + - - +
89B ALA* 3.0 30.5 + - - +
192B VAL* 4.0 19.6 - - + +
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Residues in contact with VAL 86 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
8A LEU* 4.1 17.5 - - + -
26B GLN* 3.0 35.4 + - - +
83B MET* 3.7 14.6 - - + +
85B ALA* 1.3 73.2 - - - +
87B LYS* 1.3 67.0 + - - +
89B ALA* 3.3 1.7 + - - +
90B LEU* 2.9 23.3 + - + +
188B TRP* 3.8 45.5 - - + -
191B PHE* 4.9 1.1 - - + -
192B VAL* 3.6 23.3 - - + -
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Residues in contact with LYS 87 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
7A GLU* 3.7 28.0 + - - +
8A LEU* 3.9 21.3 - - + -
11A ASP* 3.5 42.8 + - + +
12A PHE* 5.7 0.2 - - - -
83B MET* 2.9 47.0 + - + +
84B ALA* 3.7 9.4 - - - +
85B ALA 3.3 0.2 - - - -
86B VAL* 1.3 76.1 - - - +
88B GLN* 1.3 58.6 + - - +
90B LEU* 3.4 2.6 + - - +
91B ARG* 3.0 32.5 + - - +
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Residues in contact with GLN 88 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
91A ARG* 4.9 8.0 + - - -
15B TYR* 5.6 2.9 - - - -
18B SER* 4.4 25.3 + - - -
84B ALA 3.1 16.9 + - - +
85B ALA* 4.0 4.5 - - - +
87B LYS* 1.3 74.8 - - - +
89B ALA* 1.3 61.0 + - - +
91B ARG* 3.3 21.1 + - - +
92B GLU* 2.5 64.5 + - - +
1199B CD 3.6 8.3 - - - -
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Residues in contact with ALA 89 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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85B ALA 3.0 19.2 + - - +
86B VAL 3.7 3.1 - - - +
88B GLN* 1.3 76.4 - - - +
90B LEU* 1.3 58.0 + - - +
92B GLU* 3.2 2.6 + - - +
93B ALA* 2.8 31.0 + - - +
191B PHE* 3.9 16.6 - - + -
192B VAL* 4.2 19.5 - - + -
195B TYR* 4.2 24.2 - - + -
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Residues in contact with LEU 90 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
8A LEU* 3.7 24.2 - - + -
12A PHE* 3.3 24.1 - - + -
86B VAL 2.9 17.4 + - - +
87B LYS 3.8 3.6 - - - +
89B ALA* 1.3 75.5 - - - +
91B ARG* 1.3 59.4 + - - +
94B GLY 2.9 24.9 + - - -
140B ILE* 5.4 0.2 - - + -
141B VAL* 4.4 15.3 - - + -
144B PHE* 3.6 56.1 - - + -
188B TRP* 4.3 9.6 - - + -
191B PHE* 3.9 24.4 - - + -
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Residues in contact with ARG 91 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
11A ASP* 2.8 46.9 + - - +
12A PHE* 4.2 11.2 - - + -
15A TYR* 3.5 59.4 - - + +
16A LYS* 4.9 0.3 - - - -
88A GLN* 4.8 2.0 + - - -
91A ARG* 3.4 25.7 - - - +
1202A EDO 3.3 36.1 + - - -
87B LYS* 3.0 16.8 + - - +
88B GLN* 3.4 29.4 + - - +
90B LEU* 1.3 76.0 - - - +
92B GLU* 1.3 57.9 + - + +
94B GLY* 3.5 1.2 + - - -
95B ASP* 3.1 31.1 + - - -
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Residues in contact with GLU 92 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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15A TYR* 6.0 0.2 - - - +
88B GLN* 2.5 45.2 + - - +
89B ALA 3.8 1.1 - - - +
91B ARG* 1.3 74.8 - - + +
93B ALA* 1.3 60.4 + - - +
95B ASP* 3.3 11.5 + - - +
96B GLU* 2.9 29.1 + - - +
195B TYR* 3.0 38.8 + - + +
1199B CD 2.3 29.6 - - - -
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Residues in contact with ALA 93 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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89B ALA 2.8 21.1 + - - +
90B LEU 3.8 3.1 - - - +
92B GLU* 1.3 71.4 - - - +
94B GLY* 1.3 59.4 + - - +
96B GLU* 3.2 4.5 + - - +
97B PHE* 2.8 31.5 + - - +
141B VAL* 3.7 11.8 - - + +
191B PHE* 3.7 16.8 - - + -
195B TYR* 3.9 12.3 - - + -
16D LEU* 5.0 1.6 - - - +
20D TYR* 3.5 24.8 + - - +
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Residues in contact with GLY 94 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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12A PHE* 4.1 11.7 - - - -
16A LYS* 4.1 1.6 - - - -
90B LEU 2.9 17.0 + - - -
91B ARG 3.8 1.8 - - - -
93B ALA* 1.3 73.8 - - - +
95B ASP* 1.3 63.4 + - - +
97B PHE* 3.8 0.7 - - - +
98B GLU* 3.1 36.0 + - - +
141B VAL* 4.0 6.8 - - - +
145B SER* 3.6 16.8 - - - -
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Residues in contact with ASP 95 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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15A TYR* 2.7 25.5 + - - -
16A LYS* 2.9 23.8 + - - +
19A GLN* 3.0 14.1 + - - -
91B ARG 3.1 17.3 + - - +
92B GLU* 3.5 13.9 - - - +
93B ALA 3.3 0.2 - - - -
94B GLY* 1.3 77.3 - - - +
96B GLU* 1.3 56.1 + - - +
98B GLU* 3.4 3.3 + - - +
99B LEU* 2.9 30.4 + - - +
102B ARG* 4.6 3.3 + - - +
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Residues in contact with GLU 96 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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92B GLU 2.9 16.3 + - - +
93B ALA* 3.2 4.2 + - - +
95B ASP* 1.3 77.5 - - - +
97B PHE* 1.3 57.8 + - - +
99B LEU* 3.8 6.8 - - - +
100B ARG* 2.9 33.8 + - + +
195B TYR* 3.4 25.9 - - + +
16D LEU* 4.8 4.8 - - + +
19D GLN* 2.8 38.3 + - - +
20D TYR* 4.4 4.0 + - - -
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Residues in contact with PHE 97 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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93B ALA 2.8 17.4 + - - +
94B GLY 3.8 2.5 - - - +
96B GLU* 1.3 76.9 - - - +
98B GLU* 1.3 65.6 + - + +
100B ARG* 4.8 0.2 - - - -
101B TYR* 3.2 39.9 + + - +
105B PHE* 4.2 9.6 - + - -
141B VAL* 3.8 10.1 - - + -
142B ALA* 3.9 30.3 - - + -
145B SER* 3.6 25.6 - - - -
9D AHP 4.6 5.8 - - + -
12D MET* 3.4 58.3 - - + -
13D ALA* 4.2 3.1 - - - -
16D LEU* 3.5 32.1 - - + +
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Residues in contact with GLU 98 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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16A LYS* 2.4 41.9 + - - +
94B GLY 3.1 14.4 + - - +
95B ASP* 4.0 3.0 - - - +
97B PHE* 1.3 78.5 - - + +
99B LEU* 1.3 57.4 + - - +
101B TYR 3.6 0.5 - - - +
102B ARG* 3.1 49.6 + - - +
105B PHE* 3.5 47.1 - - + +
145B SER* 3.1 30.1 + - - +
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Residues in contact with LEU 99 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95B ASP 2.9 18.5 + - - +
96B GLU* 3.8 7.0 - - - +
98B GLU* 1.3 73.9 - - - +
100B ARG* 1.3 65.9 + - - +
101B TYR 3.1 1.8 - - - -
102B ARG* 3.2 43.1 + - + +
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Residues in contact with ARG 100 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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96B GLU* 2.9 23.3 + - + +
97B PHE* 4.8 0.2 - - - -
99B LEU* 1.3 78.2 - - - +
101B TYR* 1.3 86.2 + - + +
102B ARG 3.8 1.2 + - - -
16D LEU* 6.1 2.2 - - + -
19D GLN* 5.9 5.8 - - - +
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Residues in contact with TYR 101 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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97B PHE* 3.2 31.6 + + - +
98B GLU 3.6 3.8 - - - -
99B LEU 3.1 0.6 - - - -
100B ARG* 1.3 101.4 - - + +
102B ARG* 1.3 53.3 + - - +
103B ARG 3.2 3.0 + - - -
104B ALA* 3.3 9.7 + - + +
105B PHE* 2.7 36.6 + - + +
11D HR7 5.4 0.4 - - - -
12D MET* 3.5 54.3 - - + -
15D B3D 3.0 32.9 - - + +
16D LEU* 3.1 12.2 + - + -
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Residues in contact with ARG 102 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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20A LYS* 4.7 15.2 - - - +
95B ASP* 4.6 3.4 + - - +
98B GLU* 3.1 39.0 + - - +
99B LEU* 3.2 52.2 + - + +
100B ARG 3.5 1.2 + - - -
101B TYR* 1.3 75.4 - - - +
103B ARG* 1.3 56.0 + - - +
105B PHE* 4.0 5.9 - - - +
106B SER* 2.7 44.1 + - - +
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Residues in contact with ARG 103 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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101B TYR 3.3 0.4 - - - -
102B ARG* 1.3 75.7 - - - +
104B ALA* 1.3 57.3 + - - +
106B SER* 3.2 4.8 + - - -
107B ASP* 2.6 59.9 + - - +
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Residues in contact with ALA 104 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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101B TYR* 3.3 13.1 + - + +
103B ARG* 1.3 82.0 - - + +
105B PHE* 1.3 63.1 + - - +
107B ASP* 3.4 10.7 - - - +
108B LEU* 3.0 34.5 + - + +
12D MET* 4.1 20.4 - - + -
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Residues in contact with PHE 105 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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97B PHE* 4.2 6.3 - + - -
98B GLU* 3.5 48.2 - - + +
101B TYR 2.7 26.2 + - - +
102B ARG* 4.0 6.5 - - - +
104B ALA* 1.3 73.0 - - - +
106B SER* 1.3 59.4 + - - +
108B LEU* 4.3 2.0 - - - +
109B THR* 2.5 54.8 + - + +
145B SER* 4.0 17.0 - - - -
149B ALA* 3.9 23.3 - - + -
9D AHP 4.0 25.4 - - + -
12D MET* 3.9 17.8 - - + +
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Residues in contact with SER 106 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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102B ARG* 2.7 32.3 + - - +
103B ARG* 3.8 4.0 - - - -
105B PHE* 1.3 81.4 - - - +
107B ASP* 1.3 66.2 + - - +
109B THR* 3.2 7.1 + - - -
110B SER* 3.2 24.8 + - - -
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Residues in contact with ASP 107 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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103B ARG* 2.6 52.8 + - - +
104B ALA* 3.4 9.8 - - - +
106B SER* 1.3 75.1 - - - +
108B LEU* 1.3 61.1 + - + +
110B SER* 2.7 24.2 + - - -
111B GLN* 3.6 11.0 + - - +
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Residues in contact with LEU 108 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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104B ALA* 3.0 26.3 + - + +
105B PHE 4.4 3.4 - - - +
107B ASP* 1.3 73.8 - - + +
109B THR* 1.3 62.8 + - - +
110B SER 3.2 1.8 - - - -
111B GLN* 3.0 27.7 + - - +
112B LEU* 3.6 10.3 + - - +
1D HT7 5.2 11.0 - - + -
5D ILE* 3.9 28.3 - - + +
8D B3Q 3.7 30.1 - - + -
9D AHP 3.6 40.2 - - + -
12D MET* 3.9 13.9 - - - -
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Residues in contact with THR 109 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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105B PHE* 2.5 44.8 + - + +
106B SER* 3.2 15.1 + - - -
108B LEU* 1.3 77.1 - - + +
110B SER* 1.3 57.7 + - - +
111B GLN 3.1 0.4 - - - -
112B LEU* 3.1 25.0 + - + +
149B ALA* 3.8 28.5 - - + -
153B GLU* 2.8 26.4 - - - +
9D AHP 4.5 11.2 - - + -
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Residues in contact with SER 110 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106B SER 3.2 17.9 + - - -
107B ASP* 2.7 20.3 + - - -
109B THR* 1.3 76.0 + - - +
111B GLN* 1.3 67.6 + - - +
112B LEU 3.4 3.0 + - - +
153B GLU* 4.4 5.2 - - - -
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Residues in contact with GLN 111 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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107B ASP 3.6 12.9 + - - +
108B LEU* 3.0 15.9 + - - +
110B SER* 1.3 86.9 + - - +
112B LEU* 1.3 64.4 + - - +
113B HIS* 3.2 7.4 + - - +
1D HT7 3.5 54.7 + - + +
5D ILE* 4.1 11.1 - - + +
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Residues in contact with LEU 112 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
108B LEU 3.8 5.2 - - - +
109B THR* 3.1 36.4 + - + +
110B SER 3.4 3.1 - - - +
111B GLN* 1.3 76.0 - - - +
113B HIS* 1.3 60.0 + - - +
114B ILE* 3.8 14.6 + - + +
122B SER* 6.5 0.9 - - - -
126B VAL* 5.5 1.6 - - + -
146B PHE* 4.4 16.8 - - + -
149B ALA* 4.5 2.5 - - + +
150B LEU* 4.1 28.9 - - + +
153B GLU* 3.8 27.7 - - + +
5D ILE* 3.6 33.4 - - + -
9D AHP 5.9 0.2 - - + -
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Residues in contact with HIS 113 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
111B GLN 3.2 7.5 + - - +
112B LEU* 1.3 71.8 - - - +
114B ILE* 1.3 59.8 + - - +
115B THR* 4.1 18.9 + - + +
118B THR* 4.2 8.2 + - + -
122B SER* 4.0 16.2 + - - -
1202B CD 2.8 23.4 - - - -
1203B CD 2.9 28.6 - - - -
5D ILE* 5.7 0.2 - - - +
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Residues in contact with ILE 114 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112B LEU* 3.8 19.1 + - + +
113B HIS* 1.3 75.9 - - - +
115B THR* 1.3 73.2 + - - +
118B THR* 4.8 0.4 - - - -
119B ALA* 4.4 10.5 - - + +
122B SER* 5.5 5.6 - - - +
150B LEU* 3.6 34.3 - - + +
153B GLU* 3.5 36.3 - - + +
154B SER* 4.1 4.9 - - - +
157B LYS* 5.6 2.5 - - + +
159B MET* 3.2 31.1 - - + +
162B LEU* 4.0 20.2 - - + -
166B ILE* 6.5 0.2 - - + -
1202B CD 4.2 3.2 - - - -
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Residues in contact with THR 115 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113B HIS* 4.2 22.2 - - + +
114B ILE* 1.3 80.8 - - - +
116B PRO* 1.3 71.0 - - + +
117B GLY* 4.0 2.0 + - - -
118B THR* 2.5 38.9 + - - +
119B ALA* 2.9 30.3 + - - +
159B MET* 3.9 4.3 - - - -
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Residues in contact with PRO 116 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115B THR* 1.3 88.6 - - - +
117B GLY* 1.3 60.3 + - - +
119B ALA* 3.8 9.7 + - - +
120B TYR 5.1 0.7 + - - -
159B MET* 3.5 25.7 - - + -
161B VAL* 5.7 3.6 - - + -
162B LEU* 4.1 24.0 - - + +
165B ARG* 4.8 9.7 + - - +
169B TRP* 6.0 0.2 - - - -
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Residues in contact with GLY 117 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115B THR* 3.2 3.7 + - - -
116B PRO* 1.3 81.1 - - - +
118B THR* 1.3 63.5 + - - +
120B TYR* 5.4 1.1 + - - +
121B GLN* 3.5 15.4 + - - -
----------------------------------------------------------
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Residues in contact with THR 118 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113B HIS* 4.2 12.4 + - + -
114B ILE* 4.8 0.2 - - - -
115B THR* 2.5 33.1 + - - +
117B GLY* 1.3 80.6 - - - +
119B ALA* 1.3 66.7 + - - +
120B TYR 3.3 2.5 - - - -
121B GLN* 3.1 26.6 + - - +
122B SER* 3.0 25.2 + - - -
----------------------------------------------------------
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Residues in contact with ALA 119 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
114B ILE* 4.4 11.0 - - + +
115B THR 2.9 16.2 + - - +
116B PRO 3.8 6.9 + - - +
117B GLY 3.6 1.0 - - - -
118B THR* 1.3 76.8 - - - +
120B TYR* 1.3 63.3 + - - +
122B SER* 3.3 8.0 + - - -
123B PHE* 3.0 22.3 + - - +
150B LEU* 4.8 6.4 - - + +
162B LEU* 3.7 25.8 - - + -
166B ILE* 5.8 2.9 - - + -
169B TRP* 3.9 17.5 - - + -
----------------------------------------------------------
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Residues in contact with TYR 120 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
116B PRO 5.1 1.0 + - - -
117B GLY 5.4 1.0 + - - +
118B THR 3.3 0.6 - - - -
119B ALA* 1.3 78.2 - - - +
121B GLN* 1.3 66.5 + - + +
123B PHE* 3.2 15.8 + + - +
124B GLU* 2.9 67.4 + - + +
169B TRP* 3.5 56.1 - + + -
----------------------------------------------------------
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Residues in contact with GLN 121 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
117B GLY 3.5 20.8 + - - +
118B THR* 3.1 22.0 + - - +
120B TYR* 1.3 83.8 - - + +
122B SER* 1.3 61.0 + - - +
124B GLU* 3.9 3.2 - - - +
125B GLN* 2.9 51.6 + - - +
----------------------------------------------------------
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Residues in contact with SER 122 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112B LEU* 6.5 0.9 - - - -
113B HIS 4.0 17.2 + - - -
114B ILE* 5.8 4.5 - - - -
118B THR* 3.0 16.1 + - - -
119B ALA* 3.6 10.7 - - - -
121B GLN* 1.3 77.0 - - - +
123B PHE* 1.3 62.6 + - - +
125B GLN* 4.7 0.4 - - - -
126B VAL* 3.1 31.6 + - - +
146B PHE* 4.7 1.8 - - - -
150B LEU* 5.3 9.9 - - - -
2D ALA* 3.8 18.1 - - - +
----------------------------------------------------------
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Residues in contact with PHE 123 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
119B ALA 3.0 14.0 + - - +
120B TYR* 3.4 17.3 - + - +
122B SER* 1.3 77.7 - - - +
124B GLU* 1.3 66.1 + - + +
126B VAL* 3.4 1.7 + - - +
127B VAL* 2.9 59.6 + - + +
143B PHE* 4.2 7.0 - + - -
146B PHE* 3.8 26.2 - + - -
147B GLY* 5.4 1.3 - - - -
150B LEU* 3.9 16.4 - - + +
166B ILE* 4.8 2.7 - - + -
169B TRP* 3.6 58.1 - + + -
170B MET* 3.7 26.5 - - + -
173B TYR* 4.8 6.1 - + + -
----------------------------------------------------------
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Residues in contact with GLU 124 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120B TYR* 2.9 58.3 + - + +
121B GLN* 4.0 4.3 - - - +
123B PHE* 1.3 77.9 - - + +
125B GLN* 1.3 60.8 + - + +
127B VAL* 4.5 3.4 - - + +
128B ASN* 2.9 58.7 + - - +
173B TYR* 6.5 1.6 - - + -
----------------------------------------------------------
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Residues in contact with GLN 125 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
121B GLN* 2.9 36.7 + - - +
122B SER* 4.7 0.3 - - - -
124B GLU* 1.3 77.2 - - + +
126B VAL* 1.3 65.6 + - - +
128B ASN* 4.3 2.9 - - - +
129B GLU* 3.3 23.4 + - - +
2D ALA* 3.2 30.8 + - + +
3D ARG* 4.0 22.5 + - + +
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Residues in contact with VAL 126 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112B LEU* 5.5 1.6 - - + -
122B SER* 3.1 17.7 + - - +
125B GLN* 1.3 78.0 - - - +
127B VAL* 1.3 58.6 + - - +
129B GLU* 3.6 2.4 - - - +
130B LEU* 2.9 30.7 + - + +
146B PHE* 3.5 49.1 - - + -
2D ALA* 3.4 27.4 - - + +
5D ILE* 4.1 15.0 - - + -
6D GLY* 3.7 16.1 - - - +
9D AHP 4.6 8.7 - - + -
----------------------------------------------------------
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Residues in contact with VAL 127 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
123B PHE* 2.9 49.0 + - + +
124B GLU* 4.2 4.0 - - + +
126B VAL* 1.3 76.9 - - + +
128B ASN* 1.3 64.2 + - - +
130B LEU* 3.3 7.7 + - + -
131B PHE* 3.1 30.0 + - + +
143B PHE* 3.9 16.2 - - + -
146B PHE* 4.1 13.2 - - + -
173B TYR* 3.5 47.3 - - + -
----------------------------------------------------------
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Residues in contact with ASN 128 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
124B GLU* 2.9 48.3 + - - +
125B GLN* 4.5 2.7 - - - +
127B VAL* 1.3 77.2 - - - +
129B GLU* 1.3 57.3 + - - +
131B PHE* 3.6 1.6 - - - -
132B ARG* 3.1 28.5 + - - +
173B TYR* 3.9 24.2 + - - -
----------------------------------------------------------
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Residues in contact with GLU 129 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
125B GLN 3.3 17.3 + - - +
126B VAL 3.3 3.8 + - - +
127B VAL 3.2 0.4 - - - -
128B ASN* 1.3 77.6 - - - +
130B LEU* 1.3 63.2 + - - +
131B PHE 3.2 0.2 - - - -
132B ARG* 3.3 22.4 + - - +
1200B CD 2.8 18.9 - - - -
3D ARG* 2.5 64.0 + - - +
6D GLY 4.2 1.3 - - - -
7D ALA* 3.4 12.7 - - - +
10D ARG* 2.5 47.4 + - - +
----------------------------------------------------------
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Residues in contact with LEU 130 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
126B VAL* 2.9 21.7 + - + +
127B VAL* 3.6 9.6 - - + +
129B GLU* 1.3 77.4 - - - +
131B PHE* 1.3 72.5 + - + +
139B ARG* 3.5 34.1 + - + +
142B ALA* 4.1 6.5 - - + +
143B PHE* 3.7 23.1 - - + +
146B PHE* 5.7 1.3 - - + -
6D GLY 3.9 9.3 + - - +
9D AHP 4.0 15.5 - - + +
10D ARG* 3.3 48.7 - - - +
13D ALA* 4.1 12.6 - - + -
----------------------------------------------------------
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Residues in contact with PHE 131 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127B VAL* 3.1 23.5 + - + +
128B ASN* 3.6 3.6 - - - +
130B LEU* 1.3 89.6 - - + +
132B ARG* 1.3 64.3 + - - +
133B ASP 3.2 3.4 + - - -
134B GLY* 3.2 29.9 + - - +
135B VAL* 4.1 13.9 - - + -
139B ARG* 3.5 44.2 - - + -
140B ILE 4.0 2.7 - - - -
143B PHE* 3.8 19.7 - + + -
173B TYR* 3.4 39.3 - + - +
178B LEU* 3.6 28.0 - - + -
----------------------------------------------------------
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Residues in contact with ARG 132 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128B ASN 3.1 13.9 + - - +
129B GLU* 3.3 41.8 + - - +
130B LEU 3.5 1.2 + - - -
131B PHE* 1.3 78.2 - - - +
133B ASP* 1.3 81.5 + - - +
134B GLY 3.9 0.2 + - - -
139B ARG* 4.5 0.2 - - - +
3D ARG* 4.2 11.8 - - - +
10D ARG* 3.7 20.5 - - - +
----------------------------------------------------------
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Residues in contact with ASP 133 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132B ARG* 1.3 100.6 + - - +
134B GLY* 1.3 57.0 + - - +
139B ARG* 2.7 35.1 + - - -
1205B EDO 4.6 4.7 + - - -
10D ARG* 4.0 8.1 + - - -
----------------------------------------------------------
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Residues in contact with GLY 134 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
131B PHE* 3.2 26.4 + - - -
132B ARG 3.6 0.2 - - - -
133B ASP* 1.3 80.6 - - - +
135B VAL* 1.3 65.8 + - - -
139B ARG* 2.8 23.3 + - - +
1205B EDO 4.6 4.9 - - - -
----------------------------------------------------------
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Residues in contact with VAL 135 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
131B PHE* 4.1 10.5 - - + -
134B GLY* 1.3 79.4 - - - +
136B ASN* 1.3 68.7 + - - +
140B ILE* 3.7 22.4 - - + -
177B HIS 4.6 6.7 - - - +
178B LEU* 4.0 23.3 - - + -
181B TRP* 3.3 64.3 + - + +
1205B EDO 3.8 12.0 + - - -
----------------------------------------------------------
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Residues in contact with ASN 136 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
135B VAL* 1.3 76.9 - - - +
137B TRP* 1.3 65.1 + - - +
138B GLY* 2.9 6.8 + - - -
139B ARG* 2.9 33.4 + - - +
140B ILE* 3.1 19.4 + - - +
181B TRP* 3.7 15.5 - - + -
1205B EDO 3.4 29.4 - - - +
13D ALA 4.4 0.2 - - - +
14D ASP* 3.1 25.1 + - - +
17D ASN* 3.2 28.4 - - - +
----------------------------------------------------------
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Residues in contact with TRP 137 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
136B ASN* 1.3 74.9 - - - +
138B GLY* 1.3 56.7 + - - +
140B ILE* 3.1 32.9 + - + +
141B VAL* 2.8 34.0 + - - +
181B TRP* 3.7 22.9 - + - -
182B ILE* 3.6 26.9 - - + -
185B ASN* 4.2 17.2 + - - +
187B GLY 3.5 26.9 - - - -
188B TRP* 3.9 17.7 - + - -
190B THR* 4.9 1.4 - - - +
191B PHE* 3.7 40.1 - + + +
194B LEU* 3.4 29.4 - - + +
17D ASN* 3.6 2.2 + - - -
20D TYR* 3.9 26.7 - - + -
----------------------------------------------------------
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Residues in contact with GLY 138 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
136B ASN* 2.9 8.2 + - - -
137B TRP* 1.3 76.9 - - - +
139B ARG* 1.3 57.4 + - - +
141B VAL* 3.3 3.8 + - - +
142B ALA* 3.0 27.5 + - - +
13D ALA* 3.6 21.4 - - - +
16D LEU* 4.0 19.6 - - - +
17D ASN* 3.5 12.4 + - - +
20D TYR* 4.3 2.5 - - - -
----------------------------------------------------------
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Residues in contact with ARG 139 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130B LEU* 3.5 27.9 + - + +
131B PHE* 3.5 16.8 - - + -
133B ASP* 2.7 33.7 + - - +
134B GLY* 2.8 42.9 + - - +
136B ASN* 2.9 27.7 + - - +
138B GLY* 1.3 72.6 - - - +
140B ILE* 1.3 65.5 + - - +
142B ALA* 3.3 3.0 + - - +
143B PHE* 2.9 23.7 + - - +
1205B EDO 4.2 12.7 + - - -
10D ARG* 3.7 15.5 - - + +
11D HR7 5.1 0.4 + - - -
13D ALA* 3.6 15.3 - - + -
14D ASP* 2.8 40.5 + - - +
----------------------------------------------------------
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Residues in contact with ILE 140 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90B LEU* 5.4 1.1 - - + -
131B PHE* 4.2 9.4 - - + -
135B VAL* 3.7 17.7 - - + -
136B ASN 3.1 12.9 + - - +
137B TRP* 3.1 34.5 + - + +
139B ARG* 1.3 75.3 - - - +
141B VAL* 1.3 63.6 + - + +
143B PHE* 3.2 12.5 + - - +
144B PHE* 3.2 24.8 + - + -
178B LEU* 4.4 14.1 - - + -
181B TRP* 3.7 23.1 - - + -
182B ILE* 3.9 12.8 - - + -
188B TRP* 3.7 30.1 - - + -
191B PHE* 6.2 0.2 - - + -
----------------------------------------------------------
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Residues in contact with VAL 141 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90B LEU* 4.4 12.8 - - + -
93B ALA* 3.7 37.9 - - + +
94B GLY* 4.0 6.5 - - - +
97B PHE* 3.8 9.0 - - + -
137B TRP 2.8 21.3 + - - +
138B GLY 3.7 6.7 - - - +
140B ILE* 1.3 73.8 - - + +
142B ALA* 1.3 63.0 + - - +
144B PHE* 3.2 4.7 + - - +
145B SER* 2.9 20.7 + - - +
191B PHE* 3.9 26.9 - - + -
16D LEU* 3.8 16.8 - - + -
20D TYR* 4.0 7.6 - - + +
----------------------------------------------------------
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Residues in contact with ALA 142 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97B PHE* 3.9 26.7 - - + -
130B LEU* 4.1 13.5 - - + -
138B GLY 3.0 13.6 + - - +
139B ARG 3.3 8.9 + - - +
141B VAL* 1.3 75.9 - - - +
143B PHE* 1.3 53.5 + - - +
145B SER* 3.6 0.9 - - - -
146B PHE* 2.7 36.4 + - - +
9D AHP 4.4 10.1 - - + +
13D ALA* 3.8 17.9 - - + -
----------------------------------------------------------
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Residues in contact with PHE 143 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
9A VAL* 5.5 0.2 - - + -
123B PHE* 4.2 11.4 - + - -
127B VAL* 3.9 26.7 - - + -
130B LEU* 3.7 7.5 - - + +
131B PHE* 3.8 23.6 - + + -
139B ARG 2.9 12.4 + - - +
140B ILE 3.2 7.8 + - - +
142B ALA* 1.3 74.3 - - - +
144B PHE* 1.3 90.2 + + - +
146B PHE* 3.3 7.4 + - - +
147B GLY* 3.0 19.8 + - - -
170B MET* 3.6 50.7 - - + +
173B TYR* 3.8 22.4 - + - -
174B LEU* 4.7 4.3 - - + -
178B LEU* 4.0 14.8 - - + -
----------------------------------------------------------
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Residues in contact with PHE 144 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
8A LEU* 4.0 7.4 - - + -
9A VAL* 4.0 30.1 - - + -
12A PHE* 3.2 36.7 - + + -
90B LEU* 3.6 38.8 - - + -
140B ILE* 3.2 27.5 + - + -
141B VAL 3.2 7.0 + - - +
143B PHE* 1.3 91.3 - + - +
145B SER* 1.3 57.7 + - - +
147B GLY* 3.0 2.1 + - - -
148B GLY 2.8 26.0 + - - -
170B MET* 3.9 17.5 - - + +
174B LEU* 4.0 26.0 - - + -
188B TRP* 3.8 16.6 - + - -
----------------------------------------------------------
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Residues in contact with SER 145 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
12A PHE* 3.8 5.5 - - - -
16A LYS* 5.9 0.3 - - - +
94B GLY* 3.6 15.9 - - - -
97B PHE* 3.6 28.3 - - - -
98B GLU* 3.1 29.5 + - - +
105B PHE* 4.0 7.7 - - - -
141B VAL* 2.9 18.4 + - - +
142B ALA 3.9 2.2 - - - -
144B PHE* 1.3 75.4 - - - +
146B PHE* 1.3 58.2 + - - +
148B GLY* 3.4 0.6 + - - -
149B ALA* 2.9 29.6 + - - +
----------------------------------------------------------
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Residues in contact with PHE 146 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112B LEU* 4.4 17.5 - - + -
122B SER* 4.2 1.6 - - - -
123B PHE* 3.8 33.2 - + - -
126B VAL* 3.5 46.9 - - + -
127B VAL* 4.1 12.3 - - + -
130B LEU* 5.7 2.2 - - + -
142B ALA 2.7 21.9 + - - +
143B PHE* 3.5 7.4 - - - +
144B PHE 3.1 0.2 - - - -
145B SER* 1.3 74.8 - - - +
147B GLY* 1.3 61.0 + - - +
149B ALA* 3.2 2.9 + - + -
150B LEU* 2.8 55.0 + - + +
5D ILE* 5.1 0.7 - - + -
9D AHP 3.4 33.4 - - + +
----------------------------------------------------------
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Residues in contact with GLY 147 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
13A LEU* 3.7 7.6 - - - -
123B PHE* 5.4 0.9 - - - -
143B PHE 3.0 12.4 + - - -
144B PHE 3.0 3.1 + - - -
146B PHE* 1.3 81.1 - - - +
148B GLY* 1.3 55.6 + - - +
150B LEU* 3.3 8.1 + - - +
151B CYS* 2.9 33.6 + - - -
166B ILE* 4.1 3.9 - - - +
170B MET* 3.7 23.6 - - - -
----------------------------------------------------------
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Residues in contact with GLY 148 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
12A PHE* 4.6 0.2 - - - -
13A LEU* 3.6 16.6 - - - +
16A LYS* 4.2 23.2 - - - +
17A LEU* 5.7 0.2 - - - +
144B PHE 2.8 15.5 + - - -
145B SER 3.8 2.2 - - - -
147B GLY* 1.3 76.8 - - - +
149B ALA* 1.3 59.7 + - - +
151B CYS* 3.2 4.7 + - - +
152B VAL* 3.0 29.8 + - - +
----------------------------------------------------------
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Residues in contact with ALA 149 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
16A LYS* 6.0 0.4 - - - +
105B PHE* 3.9 11.2 - - + -
109B THR* 3.8 30.3 - - + -
112B LEU* 4.6 3.6 - - + -
145B SER 2.9 17.4 + - - +
146B PHE* 3.7 5.8 - - + +
148B GLY* 1.3 75.9 - - - +
150B LEU* 1.3 58.3 + - - +
152B VAL* 3.8 6.5 - - - +
153B GLU* 2.8 38.7 + - + +
----------------------------------------------------------
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Residues in contact with LEU 150 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112B LEU* 4.1 16.1 - - + +
114B ILE* 3.6 30.7 - - + +
119B ALA* 4.8 7.0 - - + +
122B SER* 5.3 9.0 - - - -
123B PHE* 3.9 31.6 - - + +
146B PHE* 2.8 43.3 + - + +
147B GLY* 3.6 4.9 - - - +
149B ALA* 1.3 78.5 - - - +
151B CYS* 1.3 54.0 + - - +
153B GLU* 4.0 1.5 - - - +
154B SER* 2.7 34.2 + - - +
166B ILE* 3.7 24.2 - - + -
----------------------------------------------------------
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Residues in contact with CYS 151 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
13A LEU* 3.9 20.6 - - + -
17A LEU* 4.2 17.9 - - + -
147B GLY 2.9 18.2 + - - +
148B GLY* 3.2 9.8 + - - +
150B LEU* 1.3 74.6 - - - +
152B VAL* 1.3 63.2 + - - +
154B SER* 3.3 5.5 + - - -
155B VAL* 3.1 26.0 + - - +
163B VAL* 3.8 28.0 - - + +
166B ILE* 3.8 28.5 - - - -
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Residues in contact with VAL 152 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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16A LYS* 3.8 16.6 - - + +
17A LEU* 4.3 15.7 - - + -
20A LYS* 3.7 39.7 - - + -
22A TYR* 4.0 7.9 - - + -
148B GLY 3.0 20.1 + - - +
149B ALA* 3.8 6.1 - - - +
151B CYS* 1.3 72.5 - - - +
153B GLU* 1.3 57.6 + - + +
155B VAL* 2.9 4.3 + - - +
156B ASP* 2.6 54.4 + - - +
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Residues in contact with GLU 153 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109B THR* 2.8 27.6 - - - +
110B SER* 4.4 4.5 - - - -
112B LEU* 3.8 23.0 - - + +
114B ILE* 3.5 23.2 - - + +
149B ALA* 2.8 24.0 + - + +
150B LEU 4.1 0.2 - - - +
152B VAL* 1.3 79.3 - - + +
154B SER* 1.3 60.8 + - - +
156B ASP* 3.3 10.2 - - - +
157B LYS* 3.2 37.6 + - - +
159B MET* 4.8 0.3 - - - +
1201B CD 2.4 30.1 - - - -
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Residues in contact with SER 154 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
114B ILE* 4.1 8.5 - - - +
150B LEU 2.7 22.9 + - - -
151B CYS* 3.3 8.1 - - - -
152B VAL 3.1 0.4 - - - -
153B GLU* 1.3 75.1 - - - +
155B VAL* 1.3 63.9 + - - +
157B LYS 3.3 6.4 + - - -
158B GLU 3.3 0.2 + - - -
159B MET* 2.8 52.4 + - - +
162B LEU* 3.9 22.7 - - - +
163B VAL* 4.9 4.0 - - - -
166B ILE* 3.9 8.4 - - - +
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Residues in contact with VAL 155 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
17A LEU* 4.1 13.5 - - + -
22A TYR* 3.5 40.2 + - + -
151B CYS 3.1 13.6 + - - +
152B VAL 2.9 7.2 + - - +
154B SER* 1.3 70.2 - - - +
156B ASP* 1.3 64.8 + - - +
157B LYS 3.0 2.0 - - - -
158B GLU* 3.0 14.1 + - - +
159B MET 4.5 3.4 - - - +
160B GLN* 4.7 14.8 - - + +
163B VAL* 3.9 20.4 - - + -
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Residues in contact with ASP 156 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
20A LYS* 5.6 0.3 - - - +
22A TYR* 2.6 36.6 + - - -
152B VAL* 2.6 30.7 + - - +
153B GLU* 3.3 14.4 - - - +
154B SER 3.2 0.2 - - - -
155B VAL* 1.3 72.8 - - - +
157B LYS* 1.3 79.8 + - - +
158B GLU 3.5 0.4 + - - -
1201B CD 2.5 24.7 - - - -
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Residues in contact with LYS 157 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
114B ILE* 5.6 2.9 - - + +
153B GLU* 3.2 20.4 + - + +
154B SER 3.3 1.8 + - - -
155B VAL 3.0 0.6 - - - -
156B ASP* 1.3 103.2 - - - +
158B GLU* 1.3 69.3 + - - +
159B MET* 3.4 32.9 + - + +
1201B CD 3.4 23.6 - - - -
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
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Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il