Contacts of the helix formed by residues 77 - 111 (chain E) in PDB entry 5FWP
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with GLY 77 (chain E).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71E LEU* 3.2 25.7 - - - +
74E ALA* 3.0 17.5 + - - +
75E GLU 3.5 1.8 - - - -
76E GLY* 1.3 75.0 - - - +
78E LYS* 1.3 51.5 + - - +
79E ALA 3.1 2.5 - - - -
80E GLU* 3.0 14.2 + - - +
81E LEU* 2.7 31.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 78 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71E LEU 3.4 2.7 + - - +
72E GLU* 3.3 39.2 + - - +
74E ALA 4.7 3.4 - - - +
76E GLY* 3.1 5.8 - - - +
77E GLY* 1.3 74.7 - - - +
79E ALA* 1.3 64.2 + - - +
81E LEU* 3.3 22.3 - - + +
82E GLU* 3.1 21.8 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 79 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76E GLY 3.5 12.2 + - - +
77E GLY 3.1 0.6 - - - -
78E LYS* 1.3 78.3 - - - +
80E GLU* 1.3 68.0 + - + +
82E GLU* 3.6 9.9 + - - +
83E ARG* 3.5 16.3 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 80 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71E LEU* 3.8 18.4 - - + -
76E GLY 5.5 0.2 - - - +
77E GLY* 3.0 14.2 + - - +
79E ALA* 1.3 80.9 - - + +
81E LEU* 1.3 56.2 + - - +
83E ARG* 2.7 51.3 + - - +
84E LEU* 2.8 36.0 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 81 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68E LEU* 3.0 54.0 - - + +
71E LEU* 3.7 13.2 - - + +
72E GLU* 3.9 27.4 - - + +
77E GLY 2.7 7.8 + - - +
78E LYS* 3.3 29.2 - - + +
80E GLU* 1.3 75.1 - - - +
82E GLU* 1.3 53.4 + - - +
84E LEU* 3.1 2.9 + - - +
85E GLN* 2.7 58.5 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 82 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
78E LYS 3.1 10.3 + - - +
79E ALA* 3.7 12.2 - - - +
80E GLU 3.3 0.2 - - - -
81E LEU* 1.3 78.7 - - - +
83E ARG* 1.3 62.3 + - - +
85E GLN* 3.2 18.7 + - - +
86E ALA* 3.1 22.0 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ARG 83 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71E LEU* 5.1 2.8 - - - +
79E ALA 3.5 6.9 + - - +
80E GLU* 2.7 50.9 + - - +
82E GLU* 1.3 78.9 - - - +
84E LEU* 1.3 72.1 + - - +
86E ALA* 3.3 8.3 + - - +
87E GLU* 2.9 66.1 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 84 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64E CYS* 3.5 35.2 - - + +
67E LYS* 3.5 37.9 - - + -
68E LEU* 3.5 11.2 - - + -
71E LEU* 3.6 18.2 - - + -
80E GLU 2.8 19.5 + - - +
81E LEU 3.6 3.1 - - - +
83E ARG* 1.3 79.9 - - - +
85E GLN* 1.3 55.6 + - - +
87E GLU* 3.1 23.5 + - + +
88E ALA* 2.6 33.3 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 85 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68E LEU* 3.4 25.5 - - + +
81E LEU* 2.7 48.2 + - + +
82E GLU* 3.2 18.5 + - - +
84E LEU* 1.3 70.7 - - - +
86E ALA* 1.3 53.4 + - - +
88E ALA* 3.2 4.8 + - - +
89E GLN* 2.8 47.7 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 86 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82E GLU 3.1 9.5 + - - +
83E ARG* 3.5 9.9 - - - +
84E LEU 3.2 0.2 - - - -
85E GLN* 1.3 79.5 - - - +
87E GLU* 1.3 57.7 + - + +
89E GLN* 3.3 18.2 + - - +
90E GLN* 3.0 26.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 87 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64E CYS* 5.7 0.2 - - - -
83E ARG* 2.9 52.2 + - + +
84E LEU* 3.1 22.5 + - + +
86E ALA* 1.3 72.7 - - + +
88E ALA* 1.3 60.7 - - - +
90E GLN* 3.2 9.6 + - - +
91E LEU* 2.9 36.2 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 88 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61E VAL* 3.1 23.8 - - + +
64E CYS* 3.9 19.1 - - + -
65E GLN* 5.1 0.9 - - + -
68E LEU* 4.0 19.5 - - + -
84E LEU* 2.6 20.4 + - - +
85E GLN 3.5 4.5 - - - +
87E GLU* 1.3 69.3 - - - +
89E GLN* 1.3 61.1 + - + +
91E LEU* 3.1 8.5 + - - -
92E ARG* 2.8 25.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 89 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85E GLN* 2.8 24.3 + - + +
86E ALA* 3.4 19.4 - - - +
88E ALA* 1.3 75.7 - - + +
90E GLN* 1.3 56.7 + - - +
92E ARG* 3.1 8.7 + - - +
93E LYS* 2.8 50.3 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 90 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86E ALA 3.0 13.8 + - - +
87E GLU* 3.2 11.4 + - - +
89E GLN* 1.3 77.5 - - - +
91E LEU* 1.3 57.7 + - + +
93E LYS* 3.2 25.6 + - - +
94E GLU* 2.8 58.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 91 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57E CYS* 3.6 7.9 - - - +
60E LYS* 3.8 39.7 - - + +
61E VAL* 3.7 14.6 - - + +
64E CYS* 3.3 34.3 - - - -
87E GLU* 2.9 20.8 + - + +
88E ALA* 3.1 8.0 + - - +
90E GLN* 1.3 75.5 - - + +
92E ARG* 1.3 57.1 + - - +
94E GLU* 3.4 22.8 + - - +
95E GLU* 2.9 27.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ARG 92 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58E LYS* 5.7 0.2 - - - +
61E VAL* 4.0 14.8 - - + +
65E GLN* 5.5 6.1 - - - +
88E ALA 2.8 13.4 + - - +
89E GLN* 3.4 11.9 - - - +
91E LEU* 1.3 74.3 - - - +
93E LYS* 1.3 55.9 + - + +
95E GLU* 2.9 41.3 + - - +
96E ARG* 2.8 38.6 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 93 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89E GLN* 2.8 34.0 + - + +
90E GLN* 3.4 30.7 + - - +
92E ARG* 1.3 74.0 - - + +
94E GLU* 1.3 59.8 + - - +
96E ARG* 3.4 41.8 + - - +
97E SER* 2.9 28.6 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 94 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57E CYS* 3.5 23.6 - - - -
60E LYS* 5.6 0.9 + - - +
90E GLN* 2.8 45.5 + - - +
91E LEU* 3.5 21.0 - - - +
93E LYS* 1.3 73.8 - - - +
95E GLU* 1.3 65.4 + - - +
97E SER* 2.6 24.8 + - - -
98E TRP* 2.9 17.8 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 95 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54E CYS* 3.7 24.7 - - - +
57E CYS* 3.6 13.9 - - + +
58E LYS* 3.3 33.5 - - - +
61E VAL* 3.6 13.7 - - - +
91E LEU 2.9 14.4 + - - +
92E ARG* 2.9 45.4 + - - +
94E GLU* 1.3 74.4 - - - +
96E ARG* 1.3 58.7 + - - +
98E TRP* 3.1 8.8 + - - +
99E GLU* 2.9 27.8 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ARG 96 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92E ARG* 2.8 23.3 + - + +
93E LYS* 3.4 46.5 + - - +
95E GLU* 1.3 77.1 - - - +
97E SER* 1.3 53.0 + - - +
99E GLU* 3.0 10.2 + - + +
100E GLN* 2.7 65.3 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with SER 97 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93E LYS 2.9 14.7 + - - -
94E GLU* 2.6 24.3 + - - +
96E ARG* 1.3 79.1 - - - +
98E TRP* 1.3 59.3 + - - +
100E GLN* 3.3 18.6 + - - +
101E LYS* 2.9 44.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with TRP 98 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49E GLU* 4.0 13.2 - - + -
50E LEU* 3.6 42.4 - - + +
52E ARG* 5.3 7.2 - - - -
53E GLY* 3.5 28.9 + - - -
54E CYS* 3.4 20.0 - - + -
57E CYS* 3.3 20.8 - - - -
94E GLU* 2.9 36.1 + - - +
95E GLU* 3.1 5.8 + - - +
97E SER* 1.3 79.8 + - - +
99E GLU* 1.3 57.8 + - - +
101E LYS* 3.3 21.8 + - + +
102E LEU* 2.9 31.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 99 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54E CYS* 3.8 13.3 - - - -
95E GLU* 2.9 13.2 + - + +
96E ARG* 3.0 12.3 + - + +
98E TRP* 1.3 75.4 - - - +
100E GLN* 1.3 55.4 + - + +
102E LEU* 3.1 19.7 + - - +
103E GLU* 2.7 32.2 + - + +
106E ARG* 2.8 38.1 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 100 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
96E ARG* 2.7 51.2 + - + +
97E SER* 3.5 19.0 - - - +
99E GLU* 1.3 73.1 - - + +
101E LYS* 1.3 58.3 + - + +
103E GLU* 3.1 11.1 + - - +
104E GLU* 2.9 32.1 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 101 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
50E LEU* 3.5 34.1 - - + +
97E SER* 2.9 29.0 + - - +
98E TRP* 3.4 28.9 - - + +
100E GLN* 1.3 76.6 - - + +
102E LEU* 1.3 55.9 + - - +
104E GLU* 3.0 13.8 + - + +
105E MET* 2.8 28.4 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 102 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
47E LYS* 3.7 30.5 - - + +
50E LEU* 3.6 24.5 - - + -
51E ASP* 3.8 29.2 - - + +
54E CYS* 4.1 11.7 - - + -
98E TRP 2.9 17.9 + - - +
99E GLU* 3.1 32.3 + - - +
101E LYS* 1.3 73.2 - - - +
103E GLU* 1.3 59.6 + - - +
105E MET* 3.0 8.0 + - + +
106E ARG* 2.9 39.8 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 103 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
99E GLU* 2.7 15.7 + - + +
100E GLN* 3.1 13.7 + - - +
102E LEU* 1.3 69.5 - - - +
104E GLU* 1.3 62.0 + - - +
106E ARG* 2.8 40.5 + - - +
107E LYS* 2.9 47.5 + - - +
110E LYS* 4.9 9.4 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 104 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
100E GLN 2.9 20.8 + - - +
101E LYS* 3.0 14.1 + - - +
103E GLU* 1.3 79.3 - - - +
105E MET* 1.3 54.5 + - - +
107E LYS* 2.8 44.1 + - - +
108E LYS* 2.8 39.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with MET 105 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
43E PHE* 3.4 50.9 - - + +
46E GLU* 3.1 31.2 - - - +
47E LYS* 3.6 33.2 - - + +
50E LEU* 3.4 17.5 - - + -
101E LYS 2.8 18.1 + - - +
102E LEU* 3.0 13.7 + - + +
104E GLU* 1.3 73.1 - - - +
106E ARG* 1.3 60.4 + - + +
108E LYS* 3.1 16.4 + - - +
109E GLU* 2.8 32.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ARG 106 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
47E LYS* 6.2 3.6 - - - +
99E GLU* 2.8 32.7 + - - +
102E LEU* 2.9 23.9 + - - +
103E GLU* 2.8 56.9 + - - +
105E MET* 1.3 76.9 - - + +
107E LYS* 1.3 56.7 + - - +
109E GLU* 3.1 18.9 + - - +
110E LYS* 2.9 40.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 107 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103E GLU* 2.9 33.6 + - - +
104E GLU* 2.8 44.5 + - - +
106E ARG* 1.3 77.0 - - - +
108E LYS* 1.3 56.0 + - + +
110E LYS* 3.1 18.1 + - + +
111E SER* 3.0 27.4 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 108 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
43E PHE* 3.7 20.2 - - + -
46E GLU* 2.7 35.0 + - - -
104E GLU* 2.8 23.1 + - - +
105E MET* 3.1 26.3 + - + +
107E LYS* 1.3 77.6 - - + +
109E GLU* 1.3 55.8 + - - +
111E SER* 2.7 24.7 + - - +
112E MET* 2.9 17.4 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 109 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
43E PHE* 3.4 19.3 - - + -
47E LYS* 2.8 40.4 + - - +
105E MET 2.8 19.4 + - - +
106E ARG* 3.4 19.1 - - - +
108E LYS* 1.3 75.2 - - - +
110E LYS* 1.3 64.8 + - + +
112E MET* 3.0 31.2 + - + +
114E TRP* 6.2 0.5 - - - -
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 110 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103E GLU* 4.9 10.3 + - - -
106E ARG* 2.9 27.1 + - - +
107E LYS* 3.3 18.7 - - + +
109E GLU* 1.3 77.5 - - + +
111E SER* 1.3 58.4 + - - +
112E MET 3.3 3.5 + - - +
114E TRP* 6.0 2.1 - - - -
----------------------------------------------------------
Back to top of page
Residues in contact with SER 111 (chain E).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
9E HIS* 5.4 6.4 - - - +
107E LYS 3.0 9.6 + - - -
108E LYS* 2.7 26.3 + - - +
110E LYS* 1.3 75.6 - - - +
112E MET* 1.3 63.0 + - - +
113E PRO* 3.3 9.0 - - - +
----------------------------------------------------------
Back to top of page
A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il