Contacts of the helix formed by residues 419 - 501 (chain A) in PDB entry 5TQW
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with PRO 419 (chain A).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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248A MET* 3.7 29.8 - - + -
417A GLN 4.1 4.0 - - - +
418A LEU* 1.3 91.7 - - + +
420A ILE* 1.3 56.1 + - + +
421A ILE* 3.1 9.2 - - + +
422A GLN* 3.0 20.1 + - + +
423A LEU* 2.7 32.0 + - - +
578A HIS* 5.5 4.9 - - - +
579A SER 4.2 1.6 - - - +
580A TYR* 3.5 24.6 - - + +
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Residues in contact with ILE 420 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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419A PRO* 1.3 73.1 - - + +
421A ILE* 1.3 65.4 + - + +
423A LEU* 3.7 14.5 - - + +
424A ARG* 2.9 54.8 + - + +
571A LEU* 3.7 32.8 - - + -
574A ARG 4.1 12.1 - - - +
575A PRO* 3.4 27.6 - - + +
577A ASP* 5.3 1.6 - - + -
578A HIS* 3.3 42.1 + - + +
579A SER* 4.2 12.7 + - - +
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Residues in contact with ILE 421 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
224A HIS* 5.1 13.9 - - + -
248A MET* 5.4 14.6 - - + -
419A PRO* 3.1 10.1 - - + -
420A ILE* 1.3 89.1 - - + +
422A GLN* 1.3 66.2 + - + +
424A ARG* 3.4 26.5 + - - +
425A LYS* 2.9 30.4 + - + +
578A HIS* 5.6 5.6 - - + -
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Residues in contact with GLN 422 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
248A MET* 4.3 26.3 - - + +
406A CYS* 5.3 5.9 - - - -
418A LEU* 3.5 31.0 - - + +
419A PRO* 3.0 23.1 + - + +
421A ILE* 1.3 79.1 - - - +
423A LEU* 1.3 60.5 - - - +
425A LYS* 3.5 31.2 + - - +
426A VAL* 2.9 45.4 + - - +
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Residues in contact with LEU 423 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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410A ILE* 6.1 1.3 - - + -
416A ILE 5.2 1.6 - - - +
418A LEU* 3.3 37.0 - - + +
419A PRO 2.7 20.7 + - - +
420A ILE* 3.7 18.6 - - + +
422A GLN* 1.3 73.4 - - - +
424A ARG* 1.3 57.8 + - - +
427A TRP* 3.0 55.5 + - + +
571A LEU* 3.6 20.6 - - + -
579A SER* 3.4 24.9 - - - +
580A TYR* 4.5 2.0 - - - +
581A SER* 4.1 19.3 - - - +
583A SER* 4.8 3.4 - - - +
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Residues in contact with ARG 424 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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224A HIS* 4.0 21.7 + - - -
420A ILE* 2.9 59.8 + - + +
421A ILE* 3.4 33.0 + - - +
423A LEU* 1.3 72.0 - - - +
425A LYS* 1.3 60.6 + - - +
428A ALA* 2.9 27.8 + - - +
568A TYR* 3.1 26.5 + - + +
571A LEU* 3.8 35.0 - - + +
572A LYS* 4.1 20.9 - - - +
575A PRO* 3.4 15.9 + - - +
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Residues in contact with LYS 425 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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218A TYR* 6.0 2.0 - - - -
404A SER* 5.2 1.4 + - - -
406A CYS* 6.2 2.2 - - - -
421A ILE* 2.9 21.2 + - + +
422A GLN* 3.5 34.3 + - - +
423A LEU 3.3 0.2 - - - -
424A ARG* 1.3 75.6 - - - +
426A VAL* 1.3 61.6 + - - +
428A ALA* 3.1 8.1 + - - +
429A GLU* 2.4 61.3 + - + +
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Residues in contact with VAL 426 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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404A SER* 4.9 0.2 - - - +
406A CYS* 4.3 13.7 - - + -
407A VAL* 3.8 25.7 - - + +
410A ILE* 3.7 28.3 - - + -
418A LEU* 3.9 12.6 - - + -
422A GLN* 2.9 37.2 + - - +
423A LEU 4.6 0.4 - - - +
425A LYS* 1.3 75.4 - - + +
427A TRP* 1.3 60.7 + - + +
429A GLU* 3.2 21.9 + - - +
430A ALA* 2.9 25.6 + - - +
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Residues in contact with TRP 427 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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410A ILE* 5.1 3.5 - - + +
423A LEU* 3.0 37.6 + - + +
426A VAL* 1.3 83.9 - - + +
428A ALA* 1.3 59.7 + - - +
430A ALA* 3.1 7.0 + - + +
431A VAL* 2.9 33.8 + - + +
567A LEU* 3.2 42.0 - - + -
568A TYR* 3.5 29.2 - - + -
571A LEU* 3.5 30.3 - - + -
581A SER 5.7 0.4 - - - -
582A ASP 4.4 7.9 - - - -
583A SER* 2.7 35.8 + - - -
585A GLU* 4.7 9.4 - - - -
586A MET* 4.0 22.2 - - + +
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Residues in contact with ALA 428 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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113A CYS* 3.6 39.8 - - + +
114A CYS* 4.8 5.5 - - + +
424A ARG 2.9 21.1 + - - +
425A LYS* 3.3 7.4 - - - +
427A TRP* 1.3 75.5 - - - +
429A GLU* 1.3 56.9 + - + +
431A VAL* 3.4 4.2 + - - +
432A HIS* 3.0 28.9 + - - +
568A TYR* 4.2 8.0 - - + +
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Residues in contact with GLU 429 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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114A CYS* 6.1 0.7 - - - -
261A PRO* 5.0 20.0 - - + +
404A SER* 2.8 37.0 + - - -
407A VAL* 5.5 3.6 - - + -
425A LYS* 2.4 56.3 + - + +
426A VAL* 3.3 22.3 - - - +
428A ALA* 1.3 77.6 - - - +
430A ALA* 1.3 57.7 + - - +
432A HIS* 3.3 10.4 + - - +
433A TYR* 2.9 26.9 + - - +
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Residues in contact with ALA 430 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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407A VAL* 4.3 20.6 - - + +
426A VAL 2.9 12.9 + - - +
427A TRP* 3.1 9.6 + - + +
429A GLU* 1.3 73.2 - - - +
431A VAL* 1.3 60.2 + - - +
433A TYR* 3.0 9.1 + - - +
434A VAL* 2.9 34.7 + - + +
564A ALA* 6.4 0.2 - - - -
586A MET* 4.1 28.3 - - + -
590A ILE* 4.9 6.1 - - + -
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Residues in contact with VAL 431 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
111A GLU* 4.6 9.6 - - - +
113A CYS* 4.5 10.1 - - - -
427A TRP* 2.9 17.3 + - + +
428A ALA* 3.8 6.1 - - - +
430A ALA* 1.3 76.6 - - + +
432A HIS* 1.3 55.9 + - - +
434A VAL* 4.5 3.1 - - - +
435A SER* 2.4 47.6 + - - +
561A GLU* 4.9 9.0 - - + +
564A ALA* 4.5 14.1 - - + +
565A ILE* 3.7 51.4 - - + +
568A TYR* 4.9 2.5 - - + -
586A MET* 5.5 1.1 - - + -
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Residues in contact with HIS 432 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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113A CYS* 5.2 0.8 - - - -
114A CYS* 2.8 32.6 - - + -
261A PRO* 3.1 47.3 + - + +
262A ASN 3.7 17.8 + - - -
263A SER* 5.2 5.6 - - - -
428A ALA 3.0 14.8 + - - +
429A GLU* 3.4 12.8 - - - +
431A VAL* 1.3 76.9 - - - +
433A TYR* 1.3 58.6 + - - +
435A SER* 3.8 5.0 - - - -
436A GLY* 3.0 24.8 + - - -
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Residues in contact with TYR 433 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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401A ARG* 3.4 29.0 + - - -
402A SER* 3.3 39.3 + - - -
429A GLU 2.9 14.0 + - - +
430A ALA* 3.0 12.3 + - - +
432A HIS* 1.3 79.3 - - - +
434A VAL* 1.3 67.8 + - + +
436A GLY* 3.0 5.5 + - - -
437A LEU* 3.0 59.0 + - + +
590A ILE* 5.4 15.5 - - + -
594A VAL* 5.8 6.9 - - + +
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Residues in contact with VAL 434 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
430A ALA* 2.9 16.8 + - + +
431A VAL* 4.5 2.0 - - - +
433A TYR* 1.3 84.6 - - + +
435A SER* 1.3 61.5 + - - +
437A LEU* 3.1 12.2 + - + +
438A LYS* 2.9 26.3 + - - +
557A MET* 4.7 5.8 - - + +
561A GLU* 4.3 26.9 - - + +
586A MET* 6.3 1.6 - - - -
589A ILE* 5.1 8.1 - - + -
590A ILE* 4.8 17.5 - - + -
593A THR* 3.7 32.8 - - + +
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Residues in contact with SER 435 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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111A GLU 5.4 2.1 + - - -
431A VAL* 2.4 32.9 + - - +
432A HIS* 3.8 5.6 - - - -
434A VAL* 1.3 76.5 - - - +
436A GLY* 1.3 61.4 + - - +
438A LYS* 3.0 9.8 + - - +
439A GLU* 3.0 22.6 + - - +
561A GLU* 2.5 31.7 + - - -
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Residues in contact with GLY 436 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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432A HIS 3.0 16.1 + - - -
433A TYR 3.0 4.7 + - - -
435A SER* 1.3 75.4 - - - +
437A LEU* 1.3 62.1 + - - +
439A GLU* 3.4 10.3 + - - +
440A ASP* 2.9 32.3 + - - +
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Residues in contact with LEU 437 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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433A TYR* 3.0 48.4 + - + +
434A VAL* 3.1 16.4 + - + +
436A GLY* 1.3 74.9 - - - +
438A LYS* 1.3 62.8 + - - +
440A ASP* 3.1 15.1 + - - +
441A TYR* 3.0 32.1 + - + -
593A THR* 3.7 30.3 - - + -
594A VAL* 5.7 3.4 - - + +
597A GLN* 3.7 32.5 + - - +
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Residues in contact with LYS 438 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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434A VAL 2.9 11.9 + - - +
435A SER* 3.0 10.1 + - - +
437A LEU* 1.3 76.9 - - - +
439A GLU* 1.3 53.9 + - - +
441A TYR* 3.5 27.3 + - + +
442A SER* 2.3 44.3 + - - +
558A GLU* 4.3 32.1 + - + +
561A GLU* 3.2 35.9 + - - +
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Residues in contact with GLU 439 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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117A LYS* 4.7 13.0 + - - -
435A SER 3.0 11.9 + - - +
436A GLY* 3.9 11.1 - - - +
437A LEU 3.3 0.2 - - - -
438A LYS* 1.3 79.3 - - - +
440A ASP* 1.3 63.7 + - - +
442A SER* 3.4 7.4 - - - -
443A ARG* 3.0 59.1 + - + +
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Residues in contact with ASP 440 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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316A LEU* 5.3 1.8 - - - +
323A ILE* 4.8 14.5 - - - +
436A GLY 2.9 27.6 + - - +
437A LEU* 3.2 21.1 - - - +
439A GLU* 1.3 79.5 - - - +
441A TYR* 1.3 60.5 + - - +
443A ARG* 3.1 4.2 + - - +
444A LEU* 3.0 34.5 + - + +
597A GLN* 5.2 8.4 + - - +
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Residues in contact with TYR 441 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
437A LEU* 3.0 27.9 + - + -
438A LYS* 3.5 34.6 - - + +
440A ASP* 1.3 80.4 - - - +
442A SER* 1.3 62.7 + - - +
444A LEU* 3.6 16.9 - - + +
445A PHE* 2.9 61.2 + + + -
554A GLY* 2.9 38.2 + - - -
557A MET* 3.6 38.3 - - + +
558A GLU 4.1 1.9 + - - -
593A THR* 5.6 1.1 - - + -
597A GLN* 5.0 16.4 - - + +
600A VAL* 5.4 7.4 - - + -
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Residues in contact with SER 442 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
438A LYS* 2.3 36.3 + - - +
439A GLU* 3.4 11.3 - - - -
441A TYR* 1.3 81.6 - - - +
443A ARG* 1.3 61.4 + - - +
445A PHE* 3.2 18.6 - - - +
446A GLN* 3.1 31.8 + - - +
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Residues in contact with ARG 443 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
117A LYS* 4.4 15.6 - - - +
316A LEU* 4.6 11.7 - - + -
323A ILE* 5.0 8.3 - - + +
357A GLU* 5.1 2.0 + - - -
383A MET* 4.2 39.3 - - - +
385A TYR* 3.7 16.5 - - + +
439A GLU* 3.0 50.2 + - + +
440A ASP* 3.9 3.1 - - - +
442A SER* 1.3 76.0 - - - +
444A LEU* 1.3 61.8 + - - +
446A GLN* 3.2 28.1 + - - +
447A GLY* 2.9 22.0 + - - -
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Residues in contact with LEU 444 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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316A LEU* 3.8 15.5 - - + -
318A MET* 3.7 38.4 - - + +
321A ALA* 5.6 13.0 - - + -
440A ASP* 3.0 21.2 + - + +
441A TYR* 3.6 19.7 - - + +
442A SER 3.2 0.2 - - - -
443A ARG* 1.3 75.6 - - - +
445A PHE* 1.3 61.5 + - + +
447A GLY* 3.2 1.2 + - - -
448A GLN* 2.9 27.5 + - - +
597A GLN* 6.3 0.7 - - - +
601A LEU* 4.2 24.9 - - + -
604A LEU* 5.8 2.8 - - + +
605A PHE* 5.9 4.7 - - + -
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Residues in contact with PHE 445 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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441A TYR* 2.9 52.5 + + + -
442A SER* 3.2 14.8 - - - +
444A LEU* 1.3 75.9 - - + +
446A GLN* 1.3 59.5 + - + +
448A GLN* 3.2 5.8 - - - +
449A ARG* 2.9 25.6 + - - +
550A GLY 4.6 0.9 - - - -
551A ARG* 3.1 74.3 + - + +
554A GLY* 5.1 1.1 - - - -
600A VAL* 3.6 27.6 - - + -
604A LEU* 3.6 18.4 - - + -
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Residues in contact with GLN 446 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
357A GLU* 3.5 19.1 - - - +
385A TYR* 3.3 22.8 + - - +
442A SER* 3.1 18.1 + - - +
443A ARG* 3.3 28.6 + - - +
444A LEU 3.1 0.4 - - - -
445A PHE* 1.3 78.8 - - + +
447A GLY* 1.3 56.8 + - - +
449A ARG* 3.1 18.5 + - - +
450A ALA* 2.9 27.2 + - - +
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Residues in contact with GLY 447 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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318A MET* 3.8 19.5 - - - -
355A LEU* 5.3 0.2 - - - +
385A TYR* 4.1 19.7 - - - -
387A PHE* 4.3 8.3 - - - -
443A ARG 2.9 13.0 + - - -
444A LEU 3.2 4.0 + - - -
446A GLN* 1.3 73.0 - - - +
448A GLN* 1.3 65.0 + - - +
450A ALA* 3.7 3.7 - - - +
451A ALA* 3.0 23.7 + - - +
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Residues in contact with GLN 448 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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318A MET* 4.5 1.2 - - - +
387A PHE* 6.1 0.2 - - - -
444A LEU 2.9 13.2 + - - +
445A PHE* 3.2 11.5 - - - +
447A GLY* 1.3 76.1 - - - +
449A ARG* 1.3 61.8 + - - +
451A ALA* 3.3 8.0 + - - +
452A MET* 2.9 41.6 + - - +
549A TYR* 3.5 35.6 + - - -
551A ARG* 2.6 33.9 + - - -
604A LEU* 4.6 28.9 - - + +
607A HIS* 5.8 3.1 - - + +
608A LEU* 6.1 4.5 - - - +
611A LEU* 4.4 13.6 - - + +
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Residues in contact with ARG 449 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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357A GLU 6.2 0.4 - - - +
445A PHE* 2.9 11.7 + - - +
446A GLN* 3.1 18.8 + - - +
448A GLN* 1.3 79.3 - - - +
450A ALA* 1.3 59.6 + - - +
452A MET* 3.3 25.0 - - + +
453A LEU* 2.9 40.5 + - + +
551A ARG* 3.0 49.6 - - - +
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Residues in contact with ALA 450 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
355A LEU* 4.3 11.4 - - + -
356A SER 3.4 25.8 - - - +
357A GLU* 4.9 5.8 + - - +
358A THR 4.9 2.2 - - - -
359A GLY* 3.8 18.3 - - - +
385A TYR* 4.7 2.2 - - + -
446A GLN 2.9 15.0 + - - +
447A GLY* 3.7 9.0 - - - +
449A ARG* 1.3 74.0 - - - +
451A ALA* 1.3 61.8 + - - +
453A LEU* 4.3 2.2 - - - +
454A SER* 2.9 29.5 + - - -
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Residues in contact with ALA 451 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
355A LEU* 4.3 6.4 - - - +
387A PHE* 3.9 22.2 - - + -
447A GLY 3.0 13.4 + - - +
448A GLN* 3.4 10.5 - - - +
450A ALA* 1.3 76.8 - - - +
452A MET* 1.3 56.6 + - - +
454A SER* 2.6 20.9 + - - -
455A LEU* 2.9 18.0 + - - +
608A LEU* 5.1 4.0 - - + -
611A LEU* 3.9 23.1 - - + +
615A LYS* 6.0 0.3 - - - +
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Residues in contact with MET 452 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
448A GLN* 2.9 28.6 + - - +
449A ARG* 3.1 38.8 + - + +
451A ALA* 1.3 77.1 - - - +
453A LEU* 1.3 72.7 + - + +
455A LEU* 3.2 11.5 + - + +
456A LEU* 2.9 41.2 + - + +
545A GLN* 6.2 6.3 - - + -
549A TYR* 4.1 14.1 - - - -
611A LEU* 4.5 9.4 - - + +
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Residues in contact with LEU 453 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
357A GLU 5.3 3.4 - - - +
358A THR* 4.8 15.9 - - + +
449A ARG* 2.9 27.8 + - + +
450A ALA* 4.3 2.2 - - - +
452A MET* 1.3 85.8 - - + +
454A SER* 1.3 61.3 + - - +
456A LEU* 3.2 25.3 + - + +
457A ARG* 3.0 48.2 + - - +
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Residues in contact with SER 454 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
355A LEU* 4.5 9.1 - - - +
359A GLY 3.9 18.8 - - - -
450A ALA 2.9 16.5 + - - -
451A ALA* 2.6 27.2 + - - -
453A LEU* 1.3 77.5 - - - +
455A LEU* 1.3 60.7 + - - +
457A ARG* 3.0 19.9 + - - +
458A TYR* 3.0 38.9 + - - -
615A LYS* 4.8 8.6 + - - +
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Residues in contact with LEU 455 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
451A ALA 2.9 13.7 + - - +
452A MET* 3.2 8.5 - - + +
454A SER* 1.3 82.5 + - - +
456A LEU* 1.3 58.2 + - + +
458A TYR* 3.2 9.3 + - - +
459A ASN* 3.0 26.7 + - - +
541A ILE* 4.7 25.6 - - + -
544A LEU* 5.0 5.4 - - + -
611A LEU* 3.7 36.3 - - + +
614A CYS* 4.6 2.7 - - + -
615A LYS* 3.7 36.8 - - + +
618A ILE* 3.8 22.5 - - + +
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Residues in contact with LEU 456 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
452A MET* 2.9 26.1 + - + +
453A LEU* 3.2 32.7 + - + +
455A LEU* 1.3 75.4 - - + +
457A ARG* 1.3 61.2 + - - +
459A ASN* 3.3 9.3 + - - +
460A ALA* 3.0 29.1 + - - +
541A ILE* 4.8 13.2 - - + -
542A MET* 5.3 1.6 - - + -
545A GLN* 3.6 28.3 - - + +
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Residues in contact with ARG 457 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
358A THR* 2.8 45.3 + - - +
360A ILE* 3.4 26.4 - - - +
453A LEU* 3.0 29.6 + - - +
454A SER* 3.2 38.4 - - - +
456A LEU* 1.3 76.8 - - + +
458A TYR* 1.3 58.5 + - + +
460A ALA* 3.2 7.1 + - - +
461A ASN* 2.6 40.2 + - - +
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Residues in contact with TYR 458 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
454A SER* 3.0 36.6 + - - -
455A LEU* 3.6 9.0 - - - +
457A ARG* 1.3 77.3 - - + +
459A ASN* 1.3 57.7 + - - +
461A ASN* 3.5 14.7 + - - +
462A LEU* 2.9 29.3 + - - +
615A LYS* 3.5 44.4 + - + -
618A ILE* 3.9 31.4 - - + +
619A ILE* 5.2 10.4 - - + +
622A LEU* 5.1 11.7 - - + +
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Residues in contact with ASN 459 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
455A LEU 3.0 16.0 + - - +
456A LEU* 3.7 11.3 - - + +
457A ARG 3.2 0.4 - - - -
458A TYR* 1.3 77.5 - - - +
460A ALA* 1.3 56.9 + - - +
462A LEU* 3.1 11.9 + - - +
463A THR* 2.9 41.5 + - - +
534A ILE* 5.7 1.9 - - - +
538A HIS* 3.4 32.3 + - - +
541A ILE* 3.9 33.4 - - + +
542A MET* 4.5 3.0 - - - +
618A ILE* 4.9 4.9 - - + +
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Residues in contact with ALA 460 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
456A LEU 3.0 18.3 + - - +
457A ARG* 3.2 6.7 + - - +
459A ASN* 1.3 74.4 - - - +
461A ASN* 1.3 63.1 + - - +
463A THR* 2.7 22.3 + - - -
464A LYS* 3.1 29.9 + - - +
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Residues in contact with ASN 461 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
457A ARG* 2.6 30.9 + - - +
458A TYR* 3.5 19.2 - - + +
460A ALA* 1.3 76.1 - - - +
462A LEU* 1.3 59.9 + - - +
464A LYS* 3.3 9.4 + - - +
465A MET* 3.0 36.3 + - + +
622A LEU* 5.7 5.4 - - + -
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Residues in contact with LEU 462 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
458A TYR 2.9 17.6 + - - +
459A ASN* 3.1 12.8 + - - +
461A ASN* 1.3 77.3 - - - +
463A THR* 1.3 58.0 - - - +
465A MET* 3.5 7.5 + - + +
466A LYS* 2.9 28.3 + - - +
534A ILE* 4.1 37.9 - - + +
537A LEU* 5.3 2.2 - - + -
541A ILE* 6.4 1.1 - - + -
618A ILE* 4.3 20.6 - - + -
621A LEU* 4.3 27.4 - - + -
622A LEU* 3.8 26.4 - - + +
625A VAL* 4.6 10.1 - - + -
----------------------------------------------------------
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Residues in contact with THR 463 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
459A ASN* 2.9 32.6 + - - +
460A ALA* 2.7 25.9 + - - -
462A LEU* 1.3 74.6 - - + +
464A LYS* 1.3 61.3 + - - +
466A LYS* 3.2 19.9 + - - +
467A ASN* 3.0 39.7 + - - -
534A ILE* 5.3 6.7 - - + -
538A HIS* 5.6 5.4 - - + +
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Residues in contact with LYS 464 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
460A ALA* 3.1 26.7 + - - +
461A ASN* 3.3 8.7 + - - +
463A THR* 1.3 80.9 + - - +
465A MET* 1.3 57.2 + - + +
467A ASN* 3.4 7.4 + - - +
468A THR* 2.5 35.0 + - - -
----------------------------------------------------------
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Residues in contact with MET 465 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
461A ASN* 3.0 24.8 + - + +
462A LEU* 3.7 9.4 - - + +
464A LYS* 1.3 77.7 - - + +
466A LYS* 1.3 57.7 + - - +
468A THR* 3.4 10.8 - - + -
469A LEU* 2.9 33.3 + - - +
622A LEU* 5.1 8.5 - - + -
625A VAL* 4.1 17.3 - - + -
626A GLU* 4.0 30.7 - - + +
629A LEU* 4.2 22.6 - - + +
----------------------------------------------------------
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Residues in contact with LYS 466 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
462A LEU 2.9 19.1 + - - +
463A THR* 3.2 22.4 + - - +
465A MET* 1.3 77.4 - - - +
467A ASN* 1.3 90.7 + - - +
469A LEU* 3.0 15.3 + - + +
470A ILE* 2.9 42.5 + - + +
531A GLU* 4.5 19.5 - - + +
534A ILE* 4.0 33.2 - - + -
535A MET* 5.7 6.9 - - + +
625A VAL* 5.9 0.2 - - - -
----------------------------------------------------------
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Residues in contact with ASN 467 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
463A THR* 3.0 23.9 + - - +
464A LYS* 4.1 5.7 - - - +
466A LYS* 1.3 101.8 + - - +
468A THR* 1.3 61.0 + - - +
470A ILE* 3.2 20.0 + - + +
471A SER* 3.0 26.9 + - - -
----------------------------------------------------------
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Residues in contact with THR 468 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
464A LYS* 2.5 22.1 + - - +
465A MET* 3.4 17.6 - - - -
467A ASN* 1.3 77.8 - - - +
469A LEU* 1.3 56.6 + - - +
471A SER* 2.3 29.1 + - - +
472A ALA* 3.0 14.1 + - + +
629A LEU* 4.7 20.9 - - + -
633A LYS* 5.5 5.2 - - - +
----------------------------------------------------------
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Residues in contact with LEU 469 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
465A MET 2.9 17.5 + - - +
466A LYS* 3.0 12.8 + - + +
468A THR* 1.3 75.9 - - - +
470A ILE* 1.3 58.6 + - + +
472A ALA* 4.2 3.5 - - - +
473A SER* 2.9 31.1 + - - -
527A ILE 6.2 0.2 - - - +
534A ILE* 5.7 3.6 - - + -
625A VAL* 3.7 41.5 - - + +
628A ALA* 4.7 4.5 - - + -
629A LEU* 3.7 42.2 - - + +
632A ILE* 3.9 13.6 - - + +
----------------------------------------------------------
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Residues in contact with ILE 470 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
466A LYS* 2.9 31.0 + - + +
467A ASN* 3.3 33.2 - - + +
468A THR 3.2 0.2 - - - -
469A LEU* 1.3 76.4 - - - +
471A SER* 1.3 58.2 + - - +
473A SER* 2.3 26.4 + - - +
474A GLN* 2.9 30.7 + - + +
531A GLU* 4.5 16.6 - - - +
470B ILE* 5.3 12.6 - - + -
474B GLN* 6.3 0.9 - - + -
----------------------------------------------------------
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Residues in contact with SER 471 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
467A ASN 3.0 11.2 + - - -
468A THR* 2.3 36.4 + - - +
470A ILE* 1.3 77.2 - - - +
472A ALA* 1.3 63.5 + - - +
474A GLN* 3.3 3.1 + - - +
475A GLN* 3.0 34.0 + - - +
474B GLN* 4.1 23.1 - - - -
----------------------------------------------------------
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Residues in contact with ALA 472 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
468A THR* 3.0 13.3 + - + +
469A LEU 4.2 2.0 - - - +
471A SER* 1.3 82.5 + - - +
473A SER* 1.3 57.9 + - - +
475A GLN* 4.3 7.3 - - - +
476A LEU* 2.9 30.8 + - - +
629A LEU* 4.3 17.3 - - + -
632A ILE* 3.5 23.5 - - + +
633A LYS* 5.4 6.5 - - + -
----------------------------------------------------------
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Residues in contact with SER 473 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
469A LEU 2.9 17.6 + - - -
470A ILE* 2.3 29.2 + - - +
472A ALA* 1.3 75.5 - - - +
474A GLN* 1.3 72.5 + - - +
476A LEU* 3.2 7.9 + - - +
477A LYS* 2.9 42.7 + - - +
527A ILE* 4.7 19.5 - - - -
632A ILE* 4.6 8.5 - - - +
----------------------------------------------------------
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Residues in contact with GLN 474 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
470A ILE* 2.9 26.1 + - + +
471A SER 3.8 3.4 - - - +
473A SER* 1.3 90.4 + - - +
475A GLN* 1.3 58.3 + - - +
477A LYS* 3.3 12.4 + - - +
478A ALA* 3.0 28.2 + - - +
470B ILE* 6.0 1.3 - - + -
471B SER* 3.9 22.8 - - - +
474B GLN* 4.1 23.6 - - + -
475B GLN* 3.3 31.5 + - + +
----------------------------------------------------------
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Residues in contact with GLN 475 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
471A SER* 3.0 20.3 + - - +
472A ALA* 4.3 5.2 - - - +
474A GLN* 1.3 77.0 - - - +
476A LEU* 1.3 56.9 + - - +
478A ALA* 3.4 7.6 + - - +
479A LYS* 2.9 50.1 + - - +
474B GLN* 2.9 47.9 + - + +
475B GLN* 5.2 0.4 - - - -
477B LYS* 5.2 4.6 - - - +
478B ALA* 4.0 17.2 - - + +
481B GLU* 4.9 5.4 + - - +
----------------------------------------------------------
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Residues in contact with LEU 476 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
472A ALA 2.9 21.3 + - - +
473A SER* 3.3 7.6 - - - +
474A GLN 3.2 0.2 - - - -
475A GLN* 1.3 77.0 - - - +
477A LYS* 1.3 63.6 + - + +
479A LYS* 3.0 11.7 + - + +
480A LEU* 3.0 42.4 + - + +
521A TYR* 4.8 17.9 - - + -
527A ILE* 6.5 0.9 - - + -
632A ILE* 3.7 49.6 - - + +
635A ALA* 4.0 15.3 - - + -
636A ASP* 4.1 12.6 - - + +
639A VAL* 5.5 1.3 - - + -
----------------------------------------------------------
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Residues in contact with LYS 477 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
473A SER* 2.9 28.0 + - - +
474A GLN* 3.9 13.6 - - - +
476A LEU* 1.3 81.8 - - + +
478A ALA* 1.3 57.6 + - - +
480A LEU* 3.5 17.9 + - + +
481A GLU* 3.0 27.4 + - - +
521A TYR 5.3 3.4 - - - -
527A ILE* 3.5 45.5 - - - +
475B GLN* 5.1 5.8 - - - +
----------------------------------------------------------
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Residues in contact with ALA 478 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
474A GLN 3.0 17.0 + - - +
475A GLN* 3.7 5.8 - - - +
476A LEU 3.2 0.2 - - - -
477A LYS* 1.3 79.0 - - - +
479A LYS* 1.3 57.1 + - - +
481A GLU* 3.2 17.1 - - - +
482A PHE* 3.0 31.4 + - - +
475B GLN* 3.6 33.1 - - + +
478B ALA* 4.9 5.4 - - + -
479B LYS* 4.7 10.1 - - + -
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Residues in contact with LYS 479 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
475A GLN* 2.9 39.0 + - - +
476A LEU* 3.0 10.5 + - + +
478A ALA* 1.3 76.3 - - + +
480A LEU* 1.3 62.7 + - - +
482A PHE* 3.5 25.2 - - + -
483A PHE* 2.9 32.4 + - - +
636A ASP* 2.9 45.0 + - + +
639A VAL* 4.2 18.1 - - + +
640A MET* 6.0 3.6 - - - -
478B ALA* 4.6 10.1 - - + -
481B GLU* 3.8 30.5 + - - -
482B PHE* 6.1 2.2 - - - -
----------------------------------------------------------
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Residues in contact with LEU 480 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476A LEU* 3.0 29.5 + - + +
477A LYS* 3.7 18.8 - - + +
478A ALA 3.4 0.2 - - - -
479A LYS* 1.3 74.4 - - - +
481A GLU* 1.3 57.3 + - - +
483A PHE* 4.0 3.5 - - - +
484A HIS* 2.9 31.2 + - - +
518A ALA* 3.4 47.5 - - + +
519A ILE 5.4 0.7 - - - +
521A TYR* 4.4 32.3 - - + -
635A ALA* 6.0 1.3 - - + -
639A VAL* 4.6 16.8 - - + -
----------------------------------------------------------
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Residues in contact with GLU 481 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
477A LYS 3.0 13.7 + - - +
478A ALA* 3.2 24.8 - - - +
479A LYS 3.1 0.4 - - - -
480A LEU* 1.3 75.8 - - - +
482A PHE* 1.3 66.1 + - + +
484A HIS* 3.2 9.9 + - - +
485A LYS* 3.1 41.3 + - - +
475B GLN* 4.5 8.5 + - - +
479B LYS* 3.7 24.9 + - - -
----------------------------------------------------------
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Residues in contact with PHE 482 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
478A ALA* 3.0 30.1 + - + +
479A LYS* 3.5 34.5 - - + -
481A GLU* 1.3 77.3 - - + +
483A PHE* 1.3 60.5 + - - +
485A LYS* 3.2 11.9 + - + +
486A SER* 2.9 29.6 + - - -
639A VAL* 4.6 10.1 - - + -
640A MET* 5.3 6.3 - - - -
643A GLN* 3.5 28.0 - - + -
479B LYS* 5.8 5.2 - - + -
482B PHE* 3.4 73.8 - + + -
640B MET* 5.6 6.3 - - + -
643B GLN* 6.2 0.7 - - - -
----------------------------------------------------------
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Residues in contact with PHE 483 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
479A LYS 2.9 22.1 + - - +
480A LEU* 4.0 4.0 - - - +
482A PHE* 1.3 83.3 - + + +
484A HIS* 1.3 57.5 + - - +
486A SER* 3.3 3.6 + - - -
487A ILE* 2.9 55.9 + - + +
514A MET* 4.3 15.7 - - + -
518A ALA* 4.7 11.4 - - + -
639A VAL* 3.4 30.3 - - + -
642A MET* 3.6 27.1 - - + -
643A GLN* 3.4 38.6 - - - -
646A ARG* 3.2 26.5 - - - -
----------------------------------------------------------
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Residues in contact with HIS 484 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
480A LEU 2.9 21.4 + - - +
481A GLU* 3.2 7.6 + - - +
483A PHE* 1.3 76.6 - - - +
485A LYS* 1.3 63.9 + - + +
487A ILE* 3.3 11.6 + - - +
488A GLN* 3.0 45.2 + - + +
515A GLU* 3.1 34.8 + - + +
518A ALA* 5.7 4.2 - - + +
----------------------------------------------------------
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Residues in contact with LYS 485 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
481A GLU* 3.1 33.2 + - - +
482A PHE* 3.2 11.4 + - - +
484A HIS* 1.3 79.7 - - + +
486A SER* 1.3 61.2 + - - +
488A GLN* 3.1 25.8 - - - +
489A LEU* 3.0 34.7 + - + +
640B MET* 3.6 43.4 - - + +
----------------------------------------------------------
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Residues in contact with SER 486 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
482A PHE* 2.9 20.7 + - - -
483A PHE* 3.8 2.2 - - - -
485A LYS* 1.3 73.0 - - - +
487A ILE* 1.3 66.4 + - - +
489A LEU* 4.2 5.7 - - - +
490A ASP* 2.9 41.1 + - - +
643A GLN* 5.0 7.2 + - - -
646A ARG* 3.0 24.1 + - - -
647A GLN* 5.6 1.7 + - - +
643B GLN* 5.3 4.5 - - - +
647B GLN* 3.6 19.8 + - - +
----------------------------------------------------------
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Residues in contact with ILE 487 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
483A PHE* 2.9 43.6 + - + +
484A HIS* 3.3 10.5 - - - +
486A SER* 1.3 75.0 - - - +
488A GLN* 1.3 59.2 + - - +
490A ASP* 3.1 4.5 + - - +
491A LEU* 2.8 44.9 + - + +
511A TRP* 4.2 16.2 - - + +
514A MET* 4.5 0.7 - - + -
515A GLU* 3.3 57.9 - - + +
518A ALA* 5.2 1.1 - - + -
646A ARG* 3.3 25.3 - - - +
----------------------------------------------------------
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Residues in contact with GLN 488 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
484A HIS* 3.0 31.1 + - + +
485A LYS* 3.1 42.7 - - - +
487A ILE* 1.3 76.6 - - + +
489A LEU* 1.3 65.2 + - + +
491A LEU* 3.2 15.1 + - + +
492A GLU* 3.0 32.9 + - + +
515A GLU* 5.7 1.3 - - - +
----------------------------------------------------------
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Residues in contact with LEU 489 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
485A LYS* 3.0 25.9 + - + +
486A SER* 4.2 2.9 - - - +
488A GLN* 1.3 84.2 - - + +
490A ASP* 1.3 60.0 + - - +
492A GLU* 3.2 32.3 - - - +
493A ARG* 3.0 34.2 + - + +
640B MET* 5.8 6.3 - - + -
643B GLN* 6.0 3.4 - - + -
644B GLY* 5.6 8.7 - - - -
647B GLN* 4.3 20.2 - - - +
----------------------------------------------------------
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Residues in contact with ASP 490 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
486A SER* 2.9 30.1 + - - +
487A ILE 3.7 3.4 - - - +
489A LEU* 1.3 76.1 - - - +
491A LEU* 1.3 60.1 + - - +
493A ARG* 4.3 6.0 - - - +
494A TYR* 2.8 33.0 + - - +
511A TRP* 3.3 18.0 - - + -
646A ARG* 3.1 28.1 + - - +
647A GLN* 5.9 0.5 - - - +
650A ILE* 4.0 20.2 - - - +
647B GLN* 4.4 15.3 + - - +
----------------------------------------------------------
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Residues in contact with LEU 491 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
487A ILE* 2.8 37.4 + - + +
488A GLN* 3.4 14.6 - - + +
489A LEU 3.2 0.2 - - - -
490A ASP* 1.3 75.2 - - - +
492A GLU* 1.3 55.3 + - - +
494A TYR* 3.7 3.1 - - - +
495A SER* 2.4 39.9 + - - +
508A LEU* 4.1 28.0 - - + +
511A TRP* 3.7 28.0 - - + -
512A LYS* 5.1 10.8 - - + -
515A GLU* 4.3 9.0 - - - +
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Residues in contact with GLU 492 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
488A GLN* 3.0 16.6 + - - +
489A LEU* 3.2 38.6 - - - +
491A LEU* 1.3 74.2 - - - +
493A ARG* 1.3 101.3 + - - +
495A SER* 2.8 23.2 + - - -
496A GLU* 2.8 19.7 + - - +
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Residues in contact with ARG 493 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
489A LEU* 3.0 20.0 + - + +
490A ASP* 4.5 6.3 - - - +
492A GLU* 1.3 122.0 + - - +
494A TYR* 1.3 58.0 + - - +
496A GLU* 2.6 45.8 + - - +
497A GLN* 3.0 36.6 + - - +
651B TRP* 3.4 59.3 - - + +
654B LEU* 5.6 1.5 - - + +
655B LYS* 4.1 5.9 - - - +
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Residues in contact with TYR 494 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
490A ASP 2.8 21.4 + - - +
491A LEU* 3.8 3.1 - - + +
493A ARG* 1.3 78.0 - - - +
495A SER* 1.3 58.0 + - - +
497A GLN* 3.1 29.5 + - + +
498A MET* 2.9 47.1 + - + +
503A SER* 2.9 27.8 + - - -
504A SER 2.3 36.0 + - - -
505A GLU* 3.6 2.1 - - - -
507A MET* 3.4 16.7 - - + +
508A LEU* 3.6 42.2 - - + -
511A TRP* 3.5 25.1 - + + -
653A LEU* 5.4 2.0 - - + -
----------------------------------------------------------
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Residues in contact with SER 495 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
491A LEU* 2.4 24.5 + - - +
492A GLU* 2.8 14.3 + - - -
494A TYR* 1.3 76.8 - - - +
496A GLU* 1.3 59.0 + - - +
498A MET* 3.1 11.0 + - - +
499A THR* 2.9 27.8 + - - +
508A LEU* 5.2 7.2 - - - +
----------------------------------------------------------
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Residues in contact with GLU 496 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
492A GLU* 2.8 25.5 + - - +
493A ARG* 2.6 49.0 + - - +
494A TYR 3.3 0.2 - - - -
495A SER* 1.3 77.6 - - - +
497A GLN* 1.3 58.5 + - - +
499A THR* 2.3 37.2 + - + +
500A TYR* 3.0 18.7 + - + -
655B LYS* 3.2 27.6 + - - +
----------------------------------------------------------
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Residues in contact with GLN 497 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
493A ARG* 3.0 24.6 + - - +
494A TYR* 3.1 35.6 + - + +
496A GLU* 1.3 78.5 - - - +
498A MET* 1.3 51.5 + - + +
500A TYR* 3.0 12.4 + - + -
501A GLY 2.6 26.9 + - - -
502A ILE* 3.2 30.1 + - + +
503A SER* 5.5 0.9 - - - -
511A TRP* 5.5 0.5 - - - -
650A ILE* 6.3 1.0 - - - +
653A LEU* 4.6 14.1 - - - +
654B LEU* 3.5 35.3 - - + +
655B LYS* 5.7 2.2 - - + -
658B CYS* 6.1 1.8 - - - -
----------------------------------------------------------
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Residues in contact with MET 498 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
494A TYR* 2.9 49.3 + - + +
495A SER* 3.1 10.7 + - - +
497A GLN* 1.3 74.7 - - - +
499A THR* 1.3 62.6 + - - +
501A GLY* 3.0 22.0 + - - +
502A ILE 4.6 0.4 - - - -
503A SER* 3.3 38.6 - - - +
505A GLU* 4.7 13.7 - - + +
508A LEU* 5.7 6.7 - - + -
----------------------------------------------------------
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Residues in contact with THR 499 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
495A SER 2.9 15.4 + - - +
496A GLU* 2.3 39.6 + - + +
498A MET* 1.3 77.1 - - - +
500A TYR* 1.3 64.9 + - - +
501A GLY* 4.8 0.2 - - - -
----------------------------------------------------------
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Residues in contact with TYR 500 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
496A GLU* 3.0 28.7 + - + -
497A GLN* 3.0 16.6 + - + +
499A THR* 1.3 81.1 - - - +
501A GLY* 1.3 62.9 + - - +
502A ILE* 3.3 27.1 - - + +
655B LYS* 3.8 34.1 + - + +
658B CYS* 3.7 45.9 - - + +
----------------------------------------------------------
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Residues in contact with GLY 501 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
497A GLN 2.6 12.0 + - - -
498A MET* 3.0 25.1 + - - -
500A TYR* 1.3 76.4 - - - +
502A ILE* 1.3 57.2 + - - +
503A SER 3.7 2.9 + - - -
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il