Contacts of the helix formed by residues 583 - 660 (chain A) in PDB entry 5TQW
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with SER 583 (chain A).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
410A ILE* 3.6 24.1 - - - +
414A SER* 3.4 9.9 + - - -
423A LEU* 4.8 3.1 - - - +
427A TRP* 2.7 38.4 + - - -
581A SER 4.7 1.7 + - - -
582A ASP* 1.3 75.1 - - - +
584A THR* 1.3 62.6 + - - +
585A GLU* 3.4 9.0 - - - -
586A MET* 3.2 15.7 - - - +
587A VAL* 3.1 24.4 + - - +
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Residues in contact with THR 584 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
414A SER* 2.3 32.5 + - - +
415A LYS* 5.1 0.2 - - - -
582A ASP* 2.3 22.5 + - - -
583A SER* 1.3 74.5 - - - +
585A GLU* 1.3 62.9 + - - +
587A VAL* 3.1 7.7 + - + +
588A LYS* 2.9 26.1 + - + +
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Residues in contact with GLU 585 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
427A TRP* 4.7 7.4 - - - -
567A LEU* 3.7 36.7 - - + +
582A ASP* 4.2 13.7 - - - +
583A SER* 3.6 5.6 - - - -
584A THR* 1.3 83.2 + - - +
586A MET* 1.3 62.3 + - - +
588A LYS* 3.2 17.0 - - + +
589A ILE* 3.0 34.5 + - + +
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Residues in contact with MET 586 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407A VAL* 5.7 1.8 - - + -
410A ILE* 5.5 2.5 - - + -
427A TRP* 4.0 38.8 - - + +
430A ALA* 4.1 22.7 - - + -
431A VAL* 5.5 1.3 - - + -
434A VAL* 6.3 1.3 - - - -
564A ALA* 3.6 42.8 - - + +
567A LEU* 4.2 9.2 - - + -
583A SER* 3.2 25.1 + - - +
584A THR 3.2 0.2 - - - -
585A GLU* 1.3 83.2 - - + +
587A VAL* 1.3 58.7 + - + +
589A ILE* 3.2 10.9 + - - +
590A ILE* 2.8 43.7 + - + +
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Residues in contact with VAL 587 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
410A ILE* 3.3 33.0 - - + +
411A VAL* 3.6 42.6 - - + +
414A SER* 4.5 0.9 - - - -
583A SER 3.1 15.2 + - - +
584A THR* 3.1 11.5 + - + +
586A MET* 1.3 72.2 - - - +
588A LYS* 1.3 59.9 + - - +
590A ILE* 3.7 9.0 - - + -
591A VAL* 2.8 39.4 + - + +
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Residues in contact with LYS 588 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
560A LEU* 6.3 2.2 - - + -
584A THR* 2.9 12.5 + - + +
585A GLU* 3.2 21.1 - - + +
587A VAL* 1.3 76.7 - - - +
589A ILE* 1.3 63.7 + - + +
591A VAL* 3.3 8.0 + - + +
592A HIS* 3.0 56.4 + - + +
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Residues in contact with ILE 589 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
434A VAL* 5.1 9.2 - - + -
560A LEU* 3.3 62.4 - - + +
561A GLU* 4.4 2.2 - - - +
563A ARG* 3.9 12.1 - - + -
564A ALA* 3.7 27.6 - - + +
567A LEU* 4.8 5.6 - - + -
585A GLU* 3.0 19.2 + - + +
586A MET* 3.4 11.7 - - - +
588A LYS* 1.3 77.7 - - + +
590A ILE* 1.3 54.3 + - + +
592A HIS* 3.9 0.9 - - - +
593A THR* 2.5 42.0 + - - +
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Residues in contact with ILE 590 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407A VAL* 4.5 15.0 - - + -
410A ILE* 5.9 0.2 - - + -
411A VAL* 3.8 29.4 - - + -
430A ALA* 4.9 4.7 - - + -
433A TYR* 5.4 13.9 - - + -
434A VAL* 4.8 15.9 - - + -
437A LEU* 6.0 0.2 - - - +
586A MET* 2.8 36.2 + - + +
587A VAL* 3.1 19.0 + - + +
589A ILE* 1.3 77.0 - - + +
591A VAL* 1.3 65.6 + - + +
593A THR* 3.1 8.7 + - - -
594A VAL* 2.9 36.9 + - + +
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Residues in contact with VAL 591 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
411A VAL* 4.9 7.4 - - + -
587A VAL* 2.8 39.1 + - + +
588A LYS* 3.4 11.4 - - - +
590A ILE* 1.3 76.9 - - + +
592A HIS* 1.3 72.1 + - + +
594A VAL* 3.3 11.4 - - + +
595A GLN* 2.9 46.8 + - + +
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Residues in contact with HIS 592 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
556A LEU* 6.4 1.1 - - + -
560A LEU* 3.9 25.1 - - + -
588A LYS* 3.0 62.4 + - + +
589A ILE* 4.9 0.7 - - - -
591A VAL* 1.3 79.5 - - + +
593A THR* 1.3 61.8 + - - +
595A GLN* 4.1 15.3 + - - +
596A SER* 2.9 38.6 + - - +
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Residues in contact with THR 593 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
434A VAL* 3.7 24.4 - - + +
437A LEU* 3.7 34.1 - - + -
441A TYR* 5.6 1.3 - - + -
557A MET* 3.4 24.3 - - + +
560A LEU* 4.2 7.6 - - - +
589A ILE* 2.5 28.7 + - - +
590A ILE* 3.3 7.2 - - - -
592A HIS* 1.3 74.7 - - - +
594A VAL* 1.3 59.6 + - - +
597A GLN* 2.9 32.5 + - - +
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Residues in contact with VAL 594 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
433A TYR* 5.8 8.5 - - + +
437A LEU* 6.0 2.5 - - + -
590A ILE* 2.9 28.1 + - + +
591A VAL* 3.2 17.5 + - + +
593A THR* 1.3 78.2 - - - +
595A GLN* 1.3 63.4 + - + +
597A GLN* 3.2 8.9 + - - +
598A ASP* 2.9 44.4 + - - +
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Residues in contact with GLN 595 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
591A VAL* 2.9 33.3 + - + +
592A HIS* 4.1 18.8 + - - +
594A VAL* 1.3 82.2 - - + +
596A SER* 1.3 58.7 + - - +
598A ASP* 3.0 13.6 + - - +
599A ARG* 2.9 45.7 + - - +
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Residues in contact with SER 596 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
553A GLN* 4.9 9.0 - - - +
556A LEU* 5.2 7.5 - - - +
557A MET* 3.6 25.6 - - - +
592A HIS* 2.9 24.6 + - - +
595A GLN* 1.3 72.7 - - - +
597A GLN* 1.3 59.6 + - - +
599A ARG* 2.5 34.2 + - - +
600A VAL* 2.9 35.0 + - - +
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Residues in contact with GLN 597 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
437A LEU* 3.7 46.1 + - - +
440A ASP* 5.2 7.3 + - - +
441A TYR* 5.0 14.7 - - + +
557A MET* 3.8 11.3 - - + -
593A THR* 2.9 24.4 + - - +
594A VAL* 3.3 8.0 - - - +
596A SER* 1.3 77.4 - - - +
598A ASP* 1.3 60.3 + - - +
600A VAL* 4.4 2.2 - - - +
601A LEU* 2.9 41.6 + - + +
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Residues in contact with ASP 598 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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594A VAL* 2.9 30.1 + - - +
595A GLN* 3.0 17.0 + - - +
597A GLN* 1.3 82.0 - - - +
599A ARG* 1.3 58.4 + - + +
601A LEU* 3.5 8.4 + - - +
602A LYS* 2.9 51.3 + - - +
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Residues in contact with ARG 599 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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553A GLN* 4.0 26.9 + - - +
556A LEU* 5.8 3.4 - - - +
595A GLN* 2.9 41.1 + - - +
596A SER* 2.5 37.1 + - - +
598A ASP* 1.3 75.6 - - + +
600A VAL* 1.3 60.7 + - - +
602A LYS* 3.9 4.0 - - - +
603A GLU* 2.9 40.8 + - + +
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Residues in contact with VAL 600 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
441A TYR* 5.4 8.3 - - + -
445A PHE* 3.6 34.5 - - + -
550A GLY* 3.4 24.9 - - - +
553A GLN* 3.3 25.4 - - + +
554A GLY 5.0 0.4 - - - +
557A MET* 4.8 7.9 - - + -
596A SER 2.9 18.1 + - - +
597A GLN* 4.4 2.7 - - - +
599A ARG* 1.3 75.1 - - - +
601A LEU* 1.3 57.8 + - - +
603A GLU* 3.7 6.9 - - - +
604A LEU* 3.0 38.9 + - + +
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Residues in contact with LEU 601 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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395A GLU 5.2 2.5 - - - +
396A GLY* 6.1 0.9 - - - -
444A LEU* 4.2 24.7 - - + -
597A GLN* 2.9 28.6 + - + +
598A ASP* 3.7 9.2 - - - +
600A VAL* 1.3 78.8 - - - +
602A LYS* 1.3 60.8 + - + +
604A LEU* 3.8 2.5 - - + +
605A PHE* 2.9 73.8 + - + -
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Residues in contact with LYS 602 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
598A ASP* 2.9 32.1 + - + +
599A ARG* 4.1 3.4 - - - +
601A LEU* 1.3 79.3 - - + +
603A GLU* 1.3 62.3 + - - +
605A PHE* 3.4 10.0 + - + +
606A GLY* 2.9 24.1 + - - -
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Residues in contact with GLU 603 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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548A PRO* 5.1 6.6 - - - +
549A TYR* 4.6 2.1 - - - -
550A GLY* 4.1 24.9 + - - -
553A GLN* 5.1 8.0 + - - +
599A ARG* 2.9 26.6 + - + +
600A VAL* 3.7 7.9 - - - +
602A LYS* 1.3 76.5 - - - +
604A LEU* 1.3 57.4 + - + +
606A GLY* 3.1 2.6 + - - -
607A HIS* 2.4 53.0 + - + +
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Residues in contact with LEU 604 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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444A LEU* 5.8 2.0 - - + +
445A PHE* 3.6 37.9 - - + +
448A GLN* 4.6 24.5 - - + +
548A PRO 4.8 0.9 - - - +
549A TYR* 4.3 24.9 - - + -
550A GLY 5.1 5.8 - - - +
551A ARG* 5.6 1.8 - - + +
600A VAL* 3.0 23.1 + - + +
601A LEU* 4.4 2.5 - - + +
603A GLU* 1.3 77.1 - - + +
605A PHE* 1.3 57.5 + - + +
607A HIS* 3.7 26.2 - - + +
608A LEU* 2.7 36.1 + - - +
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Residues in contact with PHE 605 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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318A MET* 4.3 22.7 - - + -
321A ALA* 5.9 5.4 - - + -
394A TYR* 3.2 27.3 + - + +
395A GLU 3.2 26.2 - - - -
396A GLY* 4.4 5.4 - - - -
444A LEU* 5.9 6.7 - - + -
601A LEU* 2.9 58.5 + - + +
602A LYS* 3.6 11.0 - - + +
604A LEU* 1.3 80.5 - - - +
606A GLY* 1.3 56.5 + - - +
608A LEU* 3.3 24.2 - - + +
609A SER* 2.9 30.0 + - - -
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Residues in contact with GLY 606 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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602A LYS 2.9 14.9 + - - -
603A GLU* 3.1 3.1 + - - -
605A PHE* 1.3 73.9 - - - +
607A HIS* 1.3 63.2 + - - +
609A SER* 2.8 20.9 + - - -
610A LYS* 3.0 21.2 + - - +
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Residues in contact with HIS 607 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
448A GLN* 5.8 3.6 - - + +
544A LEU* 5.2 8.7 - - + -
547A SER* 2.6 38.2 + - - -
548A PRO* 3.1 26.9 + - + +
549A TYR* 4.7 7.9 - + + -
603A GLU* 2.4 51.4 + - + +
604A LEU* 3.7 19.0 - - + +
606A GLY* 1.3 73.7 - - - +
608A LEU* 1.3 58.5 + - - +
610A LYS* 3.1 13.4 + - + +
611A LEU* 2.9 38.8 + - + +
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Residues in contact with LEU 608 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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318A MET* 5.6 6.5 - - + +
387A PHE* 3.8 35.9 - - + -
394A TYR* 3.5 35.2 - - + +
447A GLY 6.0 0.2 - - - +
448A GLN* 6.1 5.1 - - - +
451A ALA* 5.1 6.5 - - + -
604A LEU 2.7 21.3 + - - +
605A PHE* 3.3 35.0 - - + +
607A HIS* 1.3 75.2 - - - +
609A SER* 1.3 58.2 + - - +
611A LEU* 3.1 13.7 + - + +
612A LEU* 2.9 28.6 + - + +
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Residues in contact with SER 609 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
392A THR* 3.3 32.9 - - - -
393A VAL* 4.5 13.1 - - - +
394A TYR 5.3 0.9 - - - -
605A PHE 2.9 17.2 + - - -
606A GLY* 2.8 19.6 + - - -
608A LEU* 1.3 74.8 - - - +
610A LYS* 1.3 58.2 + - - +
612A LEU* 3.3 5.5 + - - +
613A GLY* 2.9 24.4 + - - -
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Residues in contact with LYS 610 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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544A LEU* 3.7 31.4 - - + +
547A SER* 5.7 3.2 + - - -
606A GLY 3.0 21.4 + - - +
607A HIS* 3.1 12.3 + - + +
609A SER* 1.3 76.5 - - - +
611A LEU* 1.3 60.1 + - - +
613A GLY* 3.3 1.8 + - - +
614A CYS* 3.0 36.1 + - - -
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Residues in contact with LEU 611 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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448A GLN* 4.4 19.3 - - + +
451A ALA* 3.9 31.0 - - + +
452A MET* 4.5 10.1 - - + +
455A LEU* 3.7 28.1 - - + +
544A LEU* 3.8 29.4 - - + +
607A HIS* 2.9 24.1 + - + +
608A LEU* 3.4 14.4 - - + +
610A LYS* 1.3 75.5 - - - +
612A LEU* 1.3 57.0 + - - +
614A CYS* 4.1 2.2 - - - +
615A LYS* 2.9 32.8 + - - +
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Residues in contact with LEU 612 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
353A GLU* 5.2 8.7 - - - +
387A PHE* 5.6 6.5 - - + -
388A ASP 4.7 4.5 - - - +
389A LYS* 4.8 10.8 - - - +
391A LYS 3.3 26.0 - - - +
392A THR* 3.3 30.7 - - + +
394A TYR* 3.5 24.5 - - + +
608A LEU* 2.9 15.4 + - + +
609A SER* 3.4 9.6 - - - +
610A LYS 3.1 0.2 - - - -
611A LEU* 1.3 76.0 - - - +
613A GLY* 1.3 60.0 + - - +
615A LYS* 3.9 10.5 - - + +
616A GLN* 3.0 31.0 + - + +
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Residues in contact with GLY 613 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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392A THR* 5.9 5.6 - - - +
609A SER 2.9 14.9 + - - -
610A LYS* 3.9 1.8 - - - -
612A LEU* 1.3 76.9 - - - +
614A CYS* 1.3 58.3 + - - +
616A GLN* 3.3 8.8 + - - +
617A LYS* 2.9 36.2 + - - +
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Residues in contact with CYS 614 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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455A LEU* 4.8 7.0 - - + -
537A LEU* 4.0 26.7 - - + +
540A GLU* 4.3 15.0 - - - -
541A ILE* 5.0 6.3 - - + -
544A LEU* 3.7 24.0 - - + -
610A LYS* 3.0 22.0 + - - +
611A LEU* 4.1 3.6 - - - +
613A GLY* 1.3 75.4 - - - +
615A LYS* 1.3 60.5 + - - +
617A LYS* 3.1 10.9 + - - +
618A ILE* 3.0 32.1 + - + +
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Residues in contact with LYS 615 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
353A GLU* 2.4 40.2 + - - +
355A LEU* 5.1 1.2 - - - +
389A LYS* 6.5 0.7 - - - -
451A ALA 6.0 0.4 - - - +
454A SER* 4.8 8.8 + - - +
455A LEU* 3.7 12.2 - - + +
458A TYR* 3.5 45.1 + - + -
611A LEU 2.9 20.0 + - - +
612A LEU* 3.9 10.8 - - + +
614A CYS* 1.3 74.7 - - - +
616A GLN* 1.3 62.8 + - - +
618A ILE* 3.0 15.0 + - - +
619A ILE* 3.0 45.1 + - + +
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Residues in contact with GLN 616 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
389A LYS 4.2 14.7 - - - +
392A THR* 6.6 0.2 - - + -
612A LEU* 3.0 22.7 + - + +
613A GLY* 3.3 9.9 - - - +
615A LYS* 1.3 75.6 - - - +
617A LYS* 1.3 57.0 + - + +
619A ILE* 3.3 20.4 + - - +
620A ASP* 2.9 62.0 + - - +
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Residues in contact with LYS 617 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
537A LEU* 3.8 25.1 - - + +
540A GLU* 3.4 25.1 + - - -
613A GLY 2.9 21.2 + - - +
614A CYS* 3.1 12.2 + - - +
616A GLN* 1.3 76.1 - - + +
618A ILE* 1.3 57.9 + - - +
620A ASP* 3.2 14.5 + - - +
621A LEU* 2.9 32.0 + - + +
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Residues in contact with ILE 618 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
455A LEU* 3.8 28.9 - - + +
458A TYR* 3.9 39.0 - - + +
459A ASN* 4.9 3.6 - - - +
462A LEU* 4.3 15.5 - - + -
537A LEU* 3.7 15.9 - - + -
541A ILE* 4.5 16.4 - - + -
614A CYS 3.0 16.0 + - - +
615A LYS* 3.0 9.1 + - - +
617A LYS* 1.3 76.6 - - - +
619A ILE* 1.3 58.7 + - + +
621A LEU* 2.8 22.9 + - - +
622A LEU* 3.0 27.3 + - + +
----------------------------------------------------------
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Residues in contact with ILE 619 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
458A TYR* 5.2 10.8 - - + +
615A LYS* 3.0 42.8 + - + +
616A GLN* 3.6 21.3 - - - +
618A ILE* 1.3 76.8 - - + +
620A ASP* 1.3 64.6 + - - +
622A LEU* 3.8 15.9 + - + +
623A PRO* 3.2 17.7 - - - +
----------------------------------------------------------
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Residues in contact with ASP 620 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
616A GLN* 2.9 44.5 + - - +
617A LYS* 3.3 14.4 - - - +
619A ILE* 1.3 79.5 - - - +
621A LEU* 1.3 61.8 + - + +
623A PRO* 3.3 15.3 - - - +
624A LYS* 4.4 14.7 - - - +
----------------------------------------------------------
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Residues in contact with LEU 621 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
462A LEU* 4.3 24.2 - - + -
530A LEU* 4.6 17.4 - - + +
533A GLN* 3.3 39.7 - - + +
534A ILE* 4.3 12.1 - - + -
537A LEU* 3.8 24.9 - - + -
617A LYS* 2.9 17.1 + - + +
618A ILE* 2.8 9.2 + - - +
620A ASP* 1.3 79.5 - - + +
622A LEU* 1.3 65.4 + - - +
623A PRO 3.5 0.3 - - - -
624A LYS* 3.6 8.6 + - + +
625A VAL* 3.3 26.2 + - + +
----------------------------------------------------------
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Residues in contact with LEU 622 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
458A TYR* 5.1 12.6 - - + +
461A ASN* 5.7 4.9 - - + -
462A LEU* 3.8 31.0 - - + +
465A MET* 5.1 9.9 - - + -
618A ILE* 3.0 25.0 + - + +
619A ILE* 4.1 15.3 - - + +
621A LEU* 1.3 76.2 - - - +
623A PRO* 1.4 68.3 - - + +
625A VAL* 3.2 7.3 + - + +
626A GLU* 3.0 44.4 + - - +
----------------------------------------------------------
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Residues in contact with PRO 623 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
619A ILE 3.2 19.1 - - - +
620A ASP* 3.3 13.2 - - - +
622A LEU* 1.4 89.4 - - + +
624A LYS* 1.3 61.7 + - + +
626A GLU* 3.9 10.4 - - + +
627A VAL* 2.9 39.7 + - + +
----------------------------------------------------------
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Residues in contact with LYS 624 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
530A LEU* 3.8 34.6 - - + +
620A ASP 4.4 15.0 - - - +
621A LEU* 4.1 7.6 - - + +
622A LEU 3.3 0.6 - - - -
623A PRO* 1.3 78.7 - - + +
625A VAL* 1.3 61.8 + - - +
627A VAL* 4.6 3.8 - - - -
628A ALA* 2.9 33.4 + - - +
----------------------------------------------------------
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Residues in contact with VAL 625 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
462A LEU* 4.6 13.0 - - + -
465A MET* 4.1 28.0 - - + -
466A LYS* 6.4 0.4 - - - -
469A LEU* 3.7 35.1 - - + +
530A LEU* 5.2 12.6 - - + -
534A ILE* 4.7 12.3 - - + -
621A LEU* 3.3 18.7 + - + +
622A LEU* 3.2 13.5 - - + +
624A LYS* 1.3 78.4 - - - +
626A GLU* 1.3 64.7 + - + +
628A ALA* 3.8 2.1 - - - +
629A LEU* 2.9 29.0 + - + +
----------------------------------------------------------
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Residues in contact with GLU 626 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
465A MET* 4.0 25.0 - - + +
622A LEU* 3.0 37.5 + - - +
623A PRO* 4.0 9.2 - - + +
625A VAL* 1.3 76.2 - - + +
627A VAL* 1.3 61.9 + - + +
629A LEU* 3.3 11.6 + - + +
630A SER* 2.9 27.7 + - - -
----------------------------------------------------------
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Residues in contact with VAL 627 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
623A PRO* 2.9 24.9 + - + +
624A LYS* 4.2 4.5 - - - +
626A GLU* 1.3 73.6 - - + +
628A ALA* 1.3 61.3 + - - +
630A SER* 2.3 29.5 + - - +
631A ASN* 2.9 30.4 + - - +
----------------------------------------------------------
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Residues in contact with ALA 628 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
469A LEU* 5.2 4.9 - - + -
530A LEU* 5.7 5.2 - - + -
624A LYS 2.9 20.6 + - - +
625A VAL* 3.9 4.3 - - - +
627A VAL* 1.3 76.3 - - - +
629A LEU* 1.3 58.1 + - - +
631A ASN* 3.2 13.6 + - - +
632A ILE* 2.9 36.8 + - + +
----------------------------------------------------------
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Residues in contact with LEU 629 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
465A MET* 4.2 25.1 - - + -
468A THR* 4.7 15.9 - - + -
469A LEU* 3.7 24.2 - - + +
472A ALA* 4.3 19.1 - - + -
625A VAL 2.9 19.7 + - - +
626A GLU* 3.3 9.2 - - + +
627A VAL 3.2 0.2 - - - -
628A ALA* 1.3 77.2 - - - +
630A SER* 1.3 58.2 + - - +
632A ILE* 3.2 6.5 + - + +
633A LYS* 3.0 61.0 + - + +
----------------------------------------------------------
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Residues in contact with SER 630 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
626A GLU 2.9 11.9 + - - -
627A VAL* 2.3 35.1 + - - +
629A LEU* 1.3 76.7 - - - +
631A ASN* 1.3 61.6 + - - +
633A LYS* 4.1 6.8 - - - +
634A GLU* 2.9 32.1 + - - +
----------------------------------------------------------
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Residues in contact with ASN 631 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
521A TYR* 5.1 13.3 - - + -
627A VAL* 2.9 40.5 + - - +
628A ALA* 3.2 11.7 + - - +
630A SER* 1.3 76.8 + - - +
632A ILE* 1.3 59.7 + - + +
634A GLU* 4.0 5.4 - - - +
635A ALA* 2.9 30.1 + - - +
----------------------------------------------------------
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Residues in contact with ILE 632 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
469A LEU* 3.9 32.8 - - + +
472A ALA* 3.5 43.1 - - + +
473A SER* 4.6 7.4 - - - +
476A LEU* 3.7 28.9 - - + +
527A ILE* 6.6 0.2 - - + -
628A ALA* 2.9 21.8 + - + +
629A LEU* 3.2 7.2 + - - +
631A ASN* 1.3 76.6 - - + +
633A LYS* 1.3 59.0 + - + +
635A ALA* 3.1 4.6 + - - +
636A ASP* 2.9 27.7 + - + +
----------------------------------------------------------
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Residues in contact with LYS 633 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
468A THR* 5.5 6.0 - - - +
472A ALA* 5.4 5.6 - - + -
629A LEU* 3.0 52.3 + - + +
630A SER* 4.1 5.6 - - - +
632A ILE* 1.3 81.5 - - + +
634A GLU* 1.3 54.1 + - - +
636A ASP* 3.3 9.8 - - - +
637A ASN* 2.5 43.8 + - - +
----------------------------------------------------------
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Residues in contact with GLU 634 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
630A SER 2.9 19.2 + - - +
631A ASN* 4.0 6.1 - - - +
633A LYS* 1.3 74.7 - - - +
635A ALA* 1.3 59.3 + - - +
637A ASN* 3.2 10.2 + - - +
638A THR* 2.9 54.0 + - + +
641A PHE* 4.6 9.5 - - - -
----------------------------------------------------------
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Residues in contact with ALA 635 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476A LEU* 4.0 15.0 - - + -
480A LEU* 6.0 1.6 - - + -
521A TYR* 4.6 31.2 - - + -
631A ASN 2.9 21.2 + - - +
632A ILE* 3.1 6.5 + - - +
634A GLU* 1.3 78.6 - - - +
636A ASP* 1.3 55.1 + - - +
638A THR* 2.5 23.9 + - - -
639A VAL* 2.9 21.9 + - + +
----------------------------------------------------------
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Residues in contact with ASP 636 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476A LEU* 4.1 8.8 - - + +
479A LYS* 2.9 44.1 + - + +
632A ILE* 2.9 14.2 + - + +
633A LYS* 3.3 14.8 - - - +
635A ALA* 1.3 75.9 - - - +
637A ASN* 1.3 63.7 + - - +
639A VAL* 3.0 10.7 + - - +
640A MET* 3.0 33.7 + - - +
----------------------------------------------------------
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Residues in contact with ASN 637 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
633A LYS* 2.5 32.5 + - - +
634A GLU* 3.2 13.6 + - - +
636A ASP* 1.3 85.0 - - - +
638A THR* 1.3 57.4 + - - +
640A MET* 3.2 11.4 + - - +
641A PHE* 2.9 49.3 + - + -
----------------------------------------------------------
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Residues in contact with THR 638 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
517A LYS* 6.0 1.3 - - + +
521A TYR* 6.0 0.9 - - - -
634A GLU* 2.9 34.8 + - + +
635A ALA* 2.5 29.4 + - - -
637A ASN* 1.3 75.2 - - - +
639A VAL* 1.3 59.4 + - - +
641A PHE* 2.9 17.0 + - + +
642A MET* 2.9 53.4 + - + +
----------------------------------------------------------
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Residues in contact with VAL 639 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476A LEU* 5.5 2.0 - - + -
479A LYS* 4.2 29.6 - - + +
480A LEU* 4.6 20.9 - - + -
482A PHE* 4.6 9.9 - - + -
483A PHE* 3.4 33.6 - - + -
518A ALA* 6.2 0.7 - - + -
635A ALA* 2.9 21.6 + - + +
636A ASP* 3.2 14.6 - - - +
638A THR* 1.3 75.4 + - - +
640A MET* 1.3 62.8 + - - +
642A MET* 5.0 2.7 - - + -
643A GLN* 2.8 30.3 + - - +
----------------------------------------------------------
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Residues in contact with MET 640 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
479A LYS* 6.0 3.8 - - - -
482A PHE* 5.3 8.3 - - - -
636A ASP* 3.0 26.6 + - - +
637A ASN* 3.5 13.5 - - - +
638A THR 3.1 0.4 - - - -
639A VAL* 1.3 82.9 - - - +
641A PHE* 1.3 62.3 + - + +
643A GLN* 3.3 19.3 - - + +
644A GLY* 2.9 26.3 + - - -
482B PHE* 5.6 5.6 - - + -
485B LYS* 3.4 46.0 - - + +
489B LEU* 6.2 3.4 - - + -
----------------------------------------------------------
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Residues in contact with PHE 641 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
634A GLU* 4.6 8.7 - - - -
637A ASN* 2.9 37.6 + - + -
638A THR* 2.9 25.5 + - + +
640A MET* 1.3 80.9 - - + +
642A MET* 1.3 63.2 + - + +
644A GLY 3.8 0.3 - - - -
645A LYS* 2.8 33.2 + - + +
----------------------------------------------------------
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Residues in contact with MET 642 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
483A PHE* 3.6 23.3 - - + -
514A MET* 3.5 39.6 - - + +
517A LYS* 3.7 46.4 - - + +
638A THR* 2.9 44.0 + - + +
639A VAL* 4.5 2.7 - - + +
641A PHE* 1.3 77.7 - - + +
643A GLN* 1.3 59.9 + - - +
645A LYS* 3.7 17.3 - - + +
646A ARG* 2.9 30.5 + - - +
----------------------------------------------------------
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Residues in contact with GLN 643 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
482A PHE* 3.5 22.7 - - + -
483A PHE* 3.4 21.8 - - + -
486A SER* 5.0 4.8 + - - -
639A VAL* 2.8 23.3 + - + +
640A MET* 3.3 27.6 - - + +
642A MET* 1.3 78.5 - - - +
644A GLY* 1.3 59.8 + - - +
646A ARG* 3.8 12.1 + - - +
647A GLN* 2.9 68.1 + - - +
482B PHE* 6.0 2.3 - - - -
486B SER* 5.3 4.9 - - - -
489B LEU* 6.2 2.5 - - + -
----------------------------------------------------------
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Residues in contact with GLY 644 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
640A MET 2.9 13.7 + - - -
641A PHE 3.8 0.7 - - - -
643A GLN* 1.3 80.4 - - - +
645A LYS* 1.3 50.6 + - - +
647A GLN* 3.8 10.0 - - - -
648A LYS* 2.6 37.4 + - - +
489B LEU* 5.6 7.6 - - - -
----------------------------------------------------------
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Residues in contact with LYS 645 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
507A MET* 5.6 0.3 - - - +
514A MET* 4.6 12.5 - - + +
641A PHE* 2.8 22.6 + - + +
642A MET* 3.7 18.1 - - + +
644A GLY* 1.3 79.0 - - - +
646A ARG* 1.3 60.6 + - - +
648A LYS* 3.2 14.3 - - + +
649A GLU* 3.0 27.4 + - - +
----------------------------------------------------------
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Residues in contact with ARG 646 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
483A PHE* 3.2 47.1 + - - -
486A SER* 3.0 28.7 + - - -
487A ILE* 3.3 24.3 - - - +
490A ASP* 3.1 29.7 + - - +
507A MET* 5.6 0.7 - - - -
511A TRP* 3.6 47.4 - - + +
514A MET* 3.8 10.4 - - + +
642A MET 2.9 19.8 + - - +
643A GLN* 3.8 11.8 + - - +
645A LYS* 1.3 76.2 - - - +
647A GLN* 1.3 59.7 + - - +
648A LYS 3.2 0.2 + - - -
649A GLU* 3.3 6.9 + - - +
650A ILE* 3.0 32.2 + - + +
----------------------------------------------------------
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Residues in contact with GLN 647 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
486A SER* 5.6 1.7 + - - +
490A ASP* 5.9 0.4 - - - +
643A GLN* 2.9 44.1 + - - +
644A GLY* 4.3 5.6 - - - -
646A ARG* 1.3 77.2 - - + +
648A LYS* 1.3 56.4 + - - +
650A ILE* 3.2 23.6 + - + +
651A TRP* 2.9 31.7 + - - +
486B SER* 3.5 24.6 + - - -
489B LEU* 4.1 28.1 - - - +
490B ASP* 4.7 11.6 + - - +
647B GLN* 4.8 13.5 - - - +
----------------------------------------------------------
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Residues in contact with LYS 648 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
644A GLY 2.6 23.1 + - - +
645A LYS* 3.2 16.4 - - + +
646A ARG 3.1 0.2 - - - -
647A GLN* 1.3 77.5 - - - +
649A GLU* 1.3 57.8 + - - +
651A TRP* 3.1 35.6 + - + +
652A HIS* 2.9 28.3 + - + +
----------------------------------------------------------
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Residues in contact with GLU 649 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
507A MET* 3.7 38.4 - - + -
511A TRP* 5.8 0.9 - - + -
645A LYS 3.0 13.3 + - - +
646A ARG 4.0 2.5 - - - +
648A LYS* 1.3 74.5 - - - +
650A ILE* 1.3 61.1 + - - +
652A HIS* 4.2 17.9 - - - +
653A LEU* 2.9 72.5 + - + +
656A ILE* 4.8 1.2 - - - +
----------------------------------------------------------
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Residues in contact with ILE 650 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
490A ASP* 4.0 28.9 - - - +
497A GLN* 6.3 1.1 - - - +
511A TRP* 5.6 6.3 - - + -
646A ARG* 3.0 25.3 + - + +
647A GLN* 3.2 27.6 - - + +
648A LYS 3.1 0.2 - - - -
649A GLU* 1.3 76.5 - - - +
651A TRP* 1.3 61.8 + - + +
653A LEU* 4.7 0.4 - - - +
654A LEU* 2.6 36.2 + - + +
647B GLN* 6.2 1.3 - - - +
650B ILE* 4.8 22.0 - - + -
----------------------------------------------------------
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Residues in contact with TRP 651 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
647A GLN 2.9 22.9 + - - +
648A LYS* 3.1 45.3 + - + +
650A ILE* 1.3 78.9 - - + +
652A HIS* 1.3 77.6 + - + +
654A LEU* 3.2 13.9 - - + +
655A LYS* 2.9 63.6 + - + +
493B ARG* 3.4 49.6 - - + +
----------------------------------------------------------
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Residues in contact with HIS 652 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
648A LYS* 2.9 19.4 + - + +
649A GLU* 4.2 19.1 - - - +
651A TRP* 1.3 100.2 - - + +
653A LEU* 1.3 61.2 + - - +
655A LYS* 3.0 6.6 + - + +
656A ILE* 2.8 55.3 + - + +
----------------------------------------------------------
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Residues in contact with LEU 653 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
494A TYR* 5.4 2.0 - - + -
497A GLN* 4.6 15.0 - - - +
502A ILE* 4.4 21.1 - - + +
503A SER* 4.1 27.1 - - - +
507A MET* 5.9 0.9 - - + -
649A GLU* 2.9 37.8 + - + +
650A ILE* 4.7 0.7 - - - +
652A HIS* 1.3 74.9 - - - +
654A LEU* 1.3 59.6 + - - +
656A ILE* 3.2 31.3 + - + +
657A ALA* 2.9 26.3 + - - +
----------------------------------------------------------
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Residues in contact with LEU 654 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
650A ILE* 2.6 26.4 + - + +
651A TRP* 3.2 22.9 - - + +
653A LEU* 1.3 75.9 - - - +
655A LYS* 1.3 66.8 + - + +
657A ALA* 3.1 11.9 + - + +
658A CYS* 2.9 35.8 + - - -
493B ARG* 5.3 4.5 - - + -
497B GLN* 3.4 32.1 - - + +
650B ILE* 5.9 1.1 - - + +
654B LEU* 4.5 32.5 - - + -
657B ALA* 5.5 4.3 - - + -
----------------------------------------------------------
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Residues in contact with LYS 655 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
651A TRP* 2.9 53.1 + - + +
652A HIS* 3.0 7.5 + - - +
654A LEU* 1.3 79.4 - - + +
656A ILE* 1.3 54.9 + - - +
658A CYS* 3.1 11.7 + - - +
659A THR* 2.7 33.5 + - - -
493B ARG* 3.7 13.6 - - - +
496B GLU* 3.1 48.6 + - - +
497B GLN* 5.8 2.2 - - + -
500B TYR* 4.1 29.8 + - + +
----------------------------------------------------------
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Residues in contact with ILE 656 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
649A GLU* 4.8 2.0 - - - +
652A HIS* 2.8 48.0 + - + +
653A LEU* 3.3 33.9 - - + +
655A LYS* 1.3 78.0 - - - +
657A ALA* 1.3 62.1 + - - +
659A THR* 3.1 23.6 + - - +
660A GLN* 4.0 5.2 + - - +
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Residues in contact with ALA 657 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
502A ILE* 6.2 2.9 - - + -
653A LEU 2.9 12.4 + - - +
654A LEU* 3.1 14.1 + - - +
656A ILE* 1.3 77.0 - - - +
658A CYS* 1.3 60.1 + - - +
659A THR 3.4 0.2 + - - -
660A GLN* 4.1 13.7 + - - +
654B LEU* 5.2 9.9 - - + -
657B ALA* 4.6 29.5 - - + +
658B CYS* 5.4 6.5 - - - -
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Residues in contact with CYS 658 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
654A LEU* 2.9 31.3 + - - -
655A LYS* 3.1 17.9 + - - +
657A ALA* 1.3 76.5 - - - +
659A THR* 1.3 65.1 + - - +
660A GLN* 4.8 0.2 - - - -
497B GLN* 5.8 3.1 - - - -
500B TYR* 3.6 48.7 - - + -
502B ILE* 4.8 12.6 - - - -
657B ALA* 5.4 7.9 - - - -
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Residues in contact with THR 659 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
655A LYS 2.7 19.9 + - - -
656A ILE* 3.1 19.9 + - - +
658A CYS* 1.3 81.4 - - - +
660A GLN* 1.3 72.2 + - + +
500B TYR* 5.6 0.7 - - - -
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Residues in contact with GLN 660 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
656A ILE 4.0 4.9 + - - +
657A ALA* 4.1 11.0 - - - +
658A CYS 3.6 0.6 - - - -
659A THR* 1.3 92.4 - - + +
660B GLN 5.1 6.2 - - - +
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
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Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il