Contacts of the helix formed by residues 583 - 660 (chain B) in PDB entry 5TQW
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with SER 583 (chain B).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
410B ILE* 3.6 23.6 - - - +
414B SER* 3.4 9.7 + - - -
423B LEU* 4.8 3.1 - - - +
427B TRP* 2.7 38.1 + - - -
581B SER 4.7 1.7 + - - -
582B ASP* 1.3 73.6 - - - +
584B THR* 1.3 63.7 + - - +
585B GLU* 3.3 9.2 - - - -
586B MET* 3.2 15.2 - - - +
587B VAL* 3.1 23.9 + - - +
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Residues in contact with THR 584 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
414B SER* 2.3 33.6 + - - +
582B ASP* 2.3 22.0 + - - -
583B SER* 1.3 74.3 - - - +
585B GLU* 1.3 62.4 + - - +
587B VAL* 3.1 8.1 + - + +
588B LYS* 2.9 25.5 + - - +
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Residues in contact with GLU 585 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
427B TRP* 4.7 7.4 - - - -
567B LEU* 3.7 35.7 - - + +
582B ASP* 4.2 13.5 - - - +
583B SER* 3.6 6.4 - - - -
584B THR* 1.3 82.5 + - - +
586B MET* 1.3 62.1 + - - +
588B LYS* 3.2 17.8 - - + +
589B ILE* 3.0 34.7 + - + +
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Residues in contact with MET 586 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407B VAL* 5.7 1.8 - - + -
410B ILE* 5.5 2.7 - - + -
427B TRP* 4.0 38.8 - - + +
430B ALA* 4.1 21.8 - - + -
431B VAL* 5.5 0.9 - - + -
434B VAL* 6.3 1.3 - - - -
564B ALA* 3.6 42.6 - - + +
567B LEU* 4.2 8.5 - - + -
583B SER* 3.2 25.5 + - - +
584B THR 3.2 0.4 - - - -
585B GLU* 1.3 83.4 - - + +
587B VAL* 1.3 58.4 + - + +
589B ILE* 3.2 10.1 + - - +
590B ILE* 2.8 45.1 + - + +
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Residues in contact with VAL 587 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
410B ILE* 3.3 33.7 - - + +
411B VAL* 3.6 42.4 - - + +
414B SER* 4.5 0.2 - - - -
583B SER 3.3 15.3 - - - +
584B THR* 3.1 11.7 + - + +
586B MET* 1.3 73.5 - - - +
588B LYS* 1.3 59.7 - - - +
590B ILE* 3.3 8.9 - - + +
591B VAL* 2.8 38.4 + - + +
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Residues in contact with LYS 588 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
560B LEU* 6.3 2.7 - - + -
584B THR* 2.9 13.2 + - + +
585B GLU* 3.2 19.5 - - + +
587B VAL* 1.3 76.7 - - - +
589B ILE* 1.3 65.6 + - + +
591B VAL* 3.3 7.1 + - - +
592B HIS* 3.0 56.2 + - + +
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Residues in contact with ILE 589 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
434B VAL* 5.1 9.9 - - + -
560B LEU* 3.3 62.5 - - + +
561B GLU* 4.4 2.0 - - - +
563B ARG* 3.9 11.7 - - + -
564B ALA* 3.7 28.7 - - + +
567B LEU* 4.8 5.2 - - + -
585B GLU* 3.0 18.5 + - + +
586B MET* 3.4 11.4 - - - +
588B LYS* 1.3 77.7 - - + +
590B ILE* 1.3 53.9 + - + +
592B HIS* 3.9 1.3 - - - +
593B THR* 2.5 42.3 + - - +
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Residues in contact with ILE 590 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407B VAL* 4.5 14.8 - - + -
411B VAL* 3.8 30.1 - - + -
430B ALA* 4.9 4.5 - - + -
433B TYR* 5.4 12.8 - - + -
434B VAL* 4.8 17.3 - - + -
586B MET* 2.8 37.0 + - + +
587B VAL* 3.1 18.8 + - + +
589B ILE* 1.3 77.3 - - + +
591B VAL* 1.3 65.7 + - + +
593B THR* 3.1 8.8 + - - -
594B VAL* 2.9 36.6 + - + +
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Residues in contact with VAL 591 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
411B VAL* 4.9 7.9 - - + -
587B VAL* 2.8 38.1 + - + +
588B LYS* 3.4 11.7 - - - +
590B ILE* 1.3 76.2 - - + +
592B HIS* 1.3 72.6 + - + +
594B VAL* 3.2 10.9 + - + +
595B GLN* 2.9 45.9 + - - +
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Residues in contact with HIS 592 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
556B LEU* 6.4 1.1 - - + -
560B LEU* 3.9 24.7 - - + -
588B LYS* 3.0 62.9 + - + +
589B ILE* 4.9 0.7 - - - -
591B VAL* 1.3 79.9 - - + +
593B THR* 1.3 61.0 + - - +
595B GLN* 4.1 15.7 + - - +
596B SER* 2.9 39.7 + - - +
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Residues in contact with THR 593 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
434B VAL* 3.7 25.5 - - + +
437B LEU* 3.7 33.7 - - + -
441B TYR* 5.6 0.9 - - + -
557B MET* 3.4 25.5 - - + +
560B LEU* 4.2 7.5 - - - +
589B ILE* 2.5 28.7 + - - +
590B ILE* 3.1 6.9 + - - -
592B HIS* 1.3 74.5 - - - +
594B VAL* 1.3 59.6 + - - +
597B GLN* 2.9 32.9 + - - +
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Residues in contact with VAL 594 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
433B TYR* 5.8 9.0 - - + +
437B LEU* 6.0 2.2 - - + -
590B ILE* 2.9 27.3 + - + +
591B VAL* 3.3 17.5 - - + +
593B THR* 1.3 78.9 - - + +
595B GLN* 1.3 64.0 + - + +
597B GLN* 3.3 9.6 - - - +
598B ASP* 2.9 44.4 + - - +
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Residues in contact with GLN 595 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
591B VAL* 2.9 31.4 + - - +
592B HIS* 4.1 19.0 + - - +
594B VAL* 1.3 83.1 - - + +
596B SER* 1.3 58.7 + - - +
598B ASP* 3.0 14.3 + - - +
599B ARG* 2.9 46.4 + - - +
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Residues in contact with SER 596 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
553B GLN* 4.8 9.5 - - - +
556B LEU* 5.2 8.0 - - - +
557B MET* 3.6 24.9 - - - +
592B HIS* 2.9 22.8 + - - +
595B GLN* 1.3 73.4 - - - +
597B GLN* 1.3 62.2 + - - +
599B ARG* 2.5 33.8 + - - +
600B VAL* 2.9 35.2 + - - +
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Residues in contact with GLN 597 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
437B LEU* 3.7 45.9 + - - +
440B ASP* 5.2 7.5 + - - +
441B TYR* 5.0 15.5 - - + +
557B MET* 3.8 11.5 - - + -
593B THR* 2.9 24.0 + - + +
594B VAL* 3.3 8.1 - - - +
596B SER* 1.3 77.6 - - - +
598B ASP* 1.3 59.6 + - - +
600B VAL* 4.3 2.5 - - - +
601B LEU* 2.9 41.6 + - + +
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Residues in contact with ASP 598 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
594B VAL* 2.9 29.3 + - - +
595B GLN* 3.0 17.3 + - - +
597B GLN* 1.3 82.5 - - - +
599B ARG* 1.3 57.5 + - + +
601B LEU* 3.7 8.1 - - - +
602B LYS* 2.9 51.9 + - - +
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Residues in contact with ARG 599 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
553B GLN* 4.0 28.5 + - - +
556B LEU* 5.8 3.2 - - - +
595B GLN* 2.9 41.0 + - - +
596B SER* 2.5 36.2 + - - +
598B ASP* 1.3 75.6 - - + +
600B VAL* 1.3 61.1 + - - +
602B LYS* 4.0 2.9 - - - +
603B GLU* 2.9 40.3 + - - +
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Residues in contact with VAL 600 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
441B TYR* 5.4 8.5 - - + -
445B PHE* 3.6 34.1 - - + -
550B GLY* 3.4 25.1 - - - +
553B GLN* 3.3 25.4 - - + +
554B GLY 5.0 0.4 - - - +
557B MET* 4.8 7.4 - - + -
596B SER 2.9 16.8 + - - +
597B GLN* 4.4 3.1 - - - +
599B ARG* 1.3 75.3 - - - +
601B LEU* 1.3 58.0 + - - +
603B GLU* 3.7 6.7 - - - +
604B LEU* 3.0 38.5 + - + +
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Residues in contact with LEU 601 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
395B GLU 5.2 2.5 - - - +
396B GLY* 6.1 1.1 - - - -
444B LEU* 4.2 24.2 - - + -
597B GLN* 2.9 29.7 + - + +
598B ASP* 3.7 9.9 - - - +
599B ARG 3.2 0.2 - - - -
600B VAL* 1.3 78.7 - - - +
602B LYS* 1.3 60.8 + - + +
604B LEU* 3.8 2.5 - - + +
605B PHE* 2.9 74.6 + - + -
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Residues in contact with LYS 602 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
598B ASP* 2.9 34.9 + - + +
599B ARG* 4.1 3.4 - - - +
601B LEU* 1.3 78.9 - - + +
603B GLU* 1.3 60.8 + - - +
605B PHE* 3.4 10.1 + - + +
606B GLY* 2.9 24.6 + - - -
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Residues in contact with GLU 603 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
548B PRO* 5.1 6.2 - - - +
549B TYR 4.6 2.3 - - - -
550B GLY* 4.1 24.9 + - - -
553B GLN* 5.1 8.0 + - - +
599B ARG* 2.9 26.1 + - - +
600B VAL* 3.7 7.6 - - - +
602B LYS* 1.3 76.1 - - - +
604B LEU* 1.3 57.1 + - + +
606B GLY* 3.1 2.6 + - - -
607B HIS* 2.4 53.3 + - + +
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Residues in contact with LEU 604 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
444B LEU* 5.8 2.0 - - + +
445B PHE* 3.6 37.5 - - + +
448B GLN* 4.6 25.2 - - + +
548B PRO 4.8 1.1 - - - +
549B TYR* 4.3 24.7 - - + -
550B GLY 5.1 6.1 - - - +
551B ARG* 5.6 2.0 - - + +
600B VAL* 3.0 24.6 + - + +
601B LEU* 3.8 2.5 - - - +
603B GLU* 1.3 76.9 - - + +
605B PHE* 1.3 56.6 + - + +
607B HIS* 3.7 26.2 - - + +
608B LEU* 2.7 36.1 + - - +
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Residues in contact with PHE 605 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
318B MET* 4.3 22.0 - - + -
321B ALA* 5.9 5.8 - - + -
394B TYR* 3.2 26.3 + - + +
395B GLU 3.2 25.8 - - - -
396B GLY* 4.4 6.3 - - - -
444B LEU* 5.9 6.7 - - + -
601B LEU* 2.9 57.4 + - + +
602B LYS* 3.6 11.2 - - + +
603B GLU 3.2 0.4 - - - -
604B LEU* 1.3 80.7 - - + +
606B GLY* 1.3 57.7 + - - +
608B LEU* 3.3 26.5 - - + +
609B SER* 2.9 28.6 + - - -
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Residues in contact with GLY 606 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
602B LYS 2.9 15.1 + - - -
603B GLU 3.1 3.1 + - - -
605B PHE* 1.3 73.9 - - - +
607B HIS* 1.3 64.2 + - - +
609B SER* 2.8 20.9 + - - -
610B LYS* 3.0 21.7 + - - +
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Residues in contact with HIS 607 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
448B GLN* 5.8 3.4 - - + -
544B LEU* 5.1 7.8 - - + +
547B SER* 2.6 38.6 + - - -
548B PRO* 3.1 27.3 + - + -
549B TYR* 4.7 7.6 - + + -
603B GLU* 2.4 52.2 + - + +
604B LEU* 3.7 19.3 - - + +
606B GLY* 1.3 73.1 - - - +
608B LEU* 1.3 57.0 + - - +
610B LYS* 3.1 13.2 + - + +
611B LEU* 2.9 39.7 + - + +
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Residues in contact with LEU 608 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
318B MET* 5.6 7.2 - - + +
387B PHE* 3.8 35.9 - - + -
394B TYR* 3.5 35.0 - - + +
447B GLY 6.0 0.2 - - - +
448B GLN* 6.1 5.5 - - + +
451B ALA* 5.1 6.7 - - + -
604B LEU 2.7 20.9 + - - +
605B PHE* 3.3 35.4 - - + +
607B HIS* 1.3 74.8 - - - +
609B SER* 1.3 59.7 + - - +
611B LEU* 3.1 14.5 + - + +
612B LEU* 2.9 29.0 + - + +
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Residues in contact with SER 609 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
392B THR* 3.3 32.0 - - - -
393B VAL* 4.5 13.4 - - - +
394B TYR 5.3 0.7 - - - -
605B PHE 2.9 17.0 + - - -
606B GLY* 2.8 19.6 + - - -
608B LEU* 1.3 74.8 - - - +
610B LYS* 1.3 57.6 + - - +
612B LEU* 3.4 6.0 - - - +
613B GLY* 2.9 24.1 + - - -
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Residues in contact with LYS 610 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
544B LEU* 3.7 32.6 - - + +
547B SER* 5.7 3.2 + - - -
606B GLY 3.0 20.2 + - - +
607B HIS* 3.1 13.4 + - + +
609B SER* 1.3 75.0 - - - +
611B LEU* 1.3 58.9 + - - +
613B GLY* 3.3 1.3 + - - -
614B CYS* 3.0 36.7 + - - -
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Residues in contact with LEU 611 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
448B GLN* 4.4 19.5 - - + +
451B ALA* 3.9 30.5 - - + +
452B MET* 4.5 11.0 - - + +
455B LEU* 3.7 28.7 - - + +
544B LEU* 3.8 28.5 - - + +
607B HIS* 2.9 25.2 + - + +
608B LEU* 3.4 13.2 - - - +
610B LYS* 1.3 75.1 - - - +
612B LEU* 1.3 58.8 + - - +
614B CYS* 4.1 2.6 - - - +
615B LYS* 2.9 32.7 + - - +
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Residues in contact with LEU 612 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
353B GLU* 5.2 8.1 - - - +
387B PHE* 5.6 7.0 - - + -
388B ASP 4.7 4.5 - - - +
389B LYS* 4.8 11.2 - - - +
391B LYS 3.3 27.1 - - - +
392B THR* 3.3 29.2 - - + +
394B TYR* 3.5 25.1 - - + +
608B LEU* 2.9 15.4 + - + +
609B SER* 3.4 10.5 - - - +
611B LEU* 1.3 75.5 - - - +
613B GLY* 1.3 61.0 + - - +
615B LYS* 3.9 10.7 - - + +
616B GLN* 2.9 31.0 + - + +
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Residues in contact with GLY 613 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
392B THR* 5.9 5.8 - - - +
609B SER 2.9 15.5 + - - -
610B LYS* 3.3 2.2 + - - -
612B LEU* 1.3 77.0 - - - +
614B CYS* 1.3 57.7 + - - +
616B GLN* 3.3 8.0 + - - +
617B LYS* 2.9 35.8 + - - +
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Residues in contact with CYS 614 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
455B LEU* 4.8 7.4 - - + -
537B LEU* 4.0 26.5 - - + +
540B GLU* 4.3 15.3 - - - -
541B ILE* 5.0 6.3 - - + -
544B LEU* 3.7 24.2 - - + -
610B LYS* 3.0 22.3 + - - +
611B LEU* 4.1 2.7 - - - +
613B GLY* 1.3 74.4 - - - +
615B LYS* 1.3 59.1 + - - +
617B LYS* 3.1 9.8 + - - +
618B ILE* 3.0 32.7 + - - +
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Residues in contact with LYS 615 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
353B GLU* 2.4 40.2 + - - +
355B LEU* 5.1 1.2 - - - +
389B LYS* 6.5 0.7 - - - -
451B ALA 6.0 0.4 - - - +
454B SER* 4.8 8.6 + - - +
455B LEU* 3.7 12.2 - - + +
458B TYR* 3.5 47.5 + - + -
611B LEU 2.9 20.0 + - - +
612B LEU* 3.9 10.5 - - + +
614B CYS* 1.3 76.0 - - - +
616B GLN* 1.3 63.7 + - - +
618B ILE* 3.0 14.7 + - - +
619B ILE* 3.0 43.3 + - + +
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Residues in contact with GLN 616 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
389B LYS 4.2 14.4 - - - +
392B THR* 6.6 0.2 - - + -
612B LEU* 2.9 23.1 + - + +
613B GLY* 3.3 10.5 - - - +
614B CYS 3.2 0.2 - - - -
615B LYS* 1.3 76.7 - - - +
617B LYS* 1.3 56.6 + - + +
619B ILE* 3.3 21.1 + - - +
620B ASP* 2.9 61.3 + - - +
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Residues in contact with LYS 617 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
537B LEU* 3.8 25.4 - - + -
540B GLU* 3.4 25.7 + - - -
613B GLY 2.9 21.4 + - - +
614B CYS* 3.1 11.0 + - - +
616B GLN* 1.3 76.2 - - + +
618B ILE* 1.3 57.7 + - - +
620B ASP* 3.2 14.2 + - - +
621B LEU* 2.9 32.5 + - + +
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Residues in contact with ILE 618 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
455B LEU* 3.8 28.7 - - + +
458B TYR* 3.9 38.8 - - + +
459B ASN* 4.9 4.0 - - - +
462B LEU* 4.3 16.8 - - + -
537B LEU* 3.7 15.9 - - + -
541B ILE* 4.5 16.8 - - + -
614B CYS 3.0 16.2 + - - +
615B LYS* 3.3 8.7 - - - +
617B LYS* 1.3 76.5 - - - +
619B ILE* 1.3 57.9 + - + +
621B LEU* 2.8 22.7 + - - +
622B LEU* 3.0 27.2 + - + +
----------------------------------------------------------
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Residues in contact with ILE 619 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
458B TYR* 5.2 10.8 - - + +
615B LYS* 3.0 43.4 + - + +
616B GLN* 3.3 22.2 + - - +
618B ILE* 1.3 77.0 - - + +
620B ASP* 1.3 64.4 + - - +
622B LEU* 3.8 15.8 + - + +
623B PRO* 3.2 18.2 - - - +
----------------------------------------------------------
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Residues in contact with ASP 620 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
616B GLN* 2.9 42.9 + - - +
617B LYS* 3.3 14.1 - - - +
618B ILE 3.1 0.4 - - - -
619B ILE* 1.3 81.1 - - - +
621B LEU* 1.3 62.0 + - + +
623B PRO* 3.3 14.7 - - - +
624B LYS* 4.4 15.4 - - - +
----------------------------------------------------------
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Residues in contact with LEU 621 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
462B LEU* 4.3 24.5 - - + -
530B LEU* 4.6 17.4 - - + +
533B GLN* 3.3 40.4 - - + +
534B ILE* 4.3 11.7 - - + -
537B LEU* 3.8 24.5 - - + -
617B LYS* 2.9 17.5 + - + +
618B ILE* 2.8 9.6 + - - +
620B ASP* 1.3 79.5 - - + +
622B LEU* 1.3 64.6 + - - +
623B PRO 3.5 0.2 - - - -
624B LYS* 3.6 7.5 + - + +
625B VAL* 3.3 26.8 + - + +
----------------------------------------------------------
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Residues in contact with LEU 622 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
458B TYR* 5.1 12.8 - - + +
461B ASN* 5.7 5.2 - - + -
462B LEU* 3.8 31.2 - - + +
465B MET* 5.1 9.9 - - + -
618B ILE* 3.0 24.1 + - + +
619B ILE* 4.1 15.9 - - + +
621B LEU* 1.3 75.9 - - - +
623B PRO* 1.4 63.8 - - + +
625B VAL* 3.2 8.3 + - + +
626B GLU* 3.0 49.0 + - - +
----------------------------------------------------------
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Residues in contact with PRO 623 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
619B ILE 3.2 18.6 - - - +
620B ASP* 3.3 14.1 - - - +
622B LEU* 1.4 88.6 - - + +
624B LYS* 1.3 61.7 + - + +
626B GLU* 4.0 10.7 - - + +
627B VAL* 2.9 39.7 + - + +
----------------------------------------------------------
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Residues in contact with LYS 624 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
530B LEU* 3.8 34.8 - - + +
620B ASP 4.4 14.8 - - - +
621B LEU* 4.1 7.6 - - + +
622B LEU 3.3 0.4 - - - -
623B PRO* 1.3 78.4 - - + +
625B VAL* 1.3 60.3 + - - +
627B VAL* 4.2 4.2 - - - +
628B ALA* 2.9 33.6 + - - +
----------------------------------------------------------
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Residues in contact with VAL 625 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
462B LEU* 4.6 13.5 - - + -
465B MET* 4.1 27.4 - - + -
466B LYS* 5.5 0.4 - - - +
469B LEU* 3.7 34.1 - - + +
530B LEU* 5.2 13.0 - - + -
534B ILE* 4.7 12.8 - - + -
621B LEU* 3.3 17.7 + - + +
622B LEU* 3.2 14.5 + - + +
624B LYS* 1.3 77.5 - - - +
626B GLU* 1.3 64.8 + - + +
628B ALA* 3.8 1.7 - - - +
629B LEU* 2.9 28.3 + - + +
----------------------------------------------------------
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Residues in contact with GLU 626 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
465B MET* 4.0 24.8 - - + +
622B LEU* 3.0 34.7 + - - +
623B PRO* 4.0 9.3 - - - +
624B LYS 3.3 0.2 - - - -
625B VAL* 1.3 78.1 - - + +
627B VAL* 1.3 62.2 + - + +
629B LEU* 3.3 10.8 + - + +
630B SER* 2.9 27.5 + - - -
----------------------------------------------------------
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Residues in contact with VAL 627 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
623B PRO* 2.9 24.7 + - + +
624B LYS* 4.2 4.0 - - - +
626B GLU* 1.3 74.1 - - + +
628B ALA* 1.3 60.5 + - - +
630B SER* 2.3 29.3 + - - +
631B ASN* 2.9 29.5 + - - +
----------------------------------------------------------
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Residues in contact with ALA 628 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
469B LEU* 5.2 5.2 - - + -
530B LEU* 5.7 5.4 - - + -
624B LYS 2.9 19.9 + - - +
625B VAL* 3.9 4.3 - - - +
627B VAL* 1.3 77.9 - - - +
629B LEU* 1.3 57.0 + - - +
631B ASN* 3.2 13.0 + - - +
632B ILE* 2.9 36.2 + - + +
----------------------------------------------------------
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Residues in contact with LEU 629 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
465B MET* 4.2 25.4 - - + +
468B THR* 4.7 16.6 - - + -
469B LEU* 3.7 24.4 - - + +
472B ALA* 4.3 18.4 - - + -
625B VAL 2.9 19.2 + - - +
626B GLU* 3.3 9.0 - - + +
627B VAL 3.2 0.2 - - - -
628B ALA* 1.3 76.3 - - - +
630B SER* 1.3 56.8 + - - +
632B ILE* 3.2 7.3 + - + +
633B LYS* 3.0 60.6 + - + +
----------------------------------------------------------
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Residues in contact with SER 630 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
626B GLU 2.9 11.7 + - - -
627B VAL* 2.3 34.4 + - - +
629B LEU* 1.3 77.7 - - - +
631B ASN* 1.3 60.3 + - - +
633B LYS* 4.0 7.0 - - - +
634B GLU* 2.9 31.2 + - - +
----------------------------------------------------------
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Residues in contact with ASN 631 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
521B TYR* 5.1 13.4 - - + -
627B VAL* 2.9 40.1 + - - +
628B ALA* 3.2 12.0 + - - +
630B SER* 1.3 77.5 + - - +
632B ILE* 1.3 60.7 + - - +
634B GLU* 4.0 5.3 - - - +
635B ALA* 2.9 30.4 + - - +
----------------------------------------------------------
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Residues in contact with ILE 632 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
469B LEU* 3.9 31.6 - - + +
472B ALA* 3.5 43.5 - - + +
473B SER* 4.6 7.0 - - - +
476B LEU* 3.7 29.4 - - + +
527B ILE* 6.6 0.2 - - + -
628B ALA* 2.9 22.5 + - + +
629B LEU* 3.2 8.0 + - - +
631B ASN* 1.3 76.3 - - - +
633B LYS* 1.3 60.7 + - + +
635B ALA* 3.1 3.6 + - - +
636B ASP* 2.9 28.0 + - + +
----------------------------------------------------------
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Residues in contact with LYS 633 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
468B THR* 5.5 5.6 - - - +
472B ALA* 5.4 6.1 - - + -
629B LEU* 3.0 53.2 + - + +
630B SER* 4.1 6.5 - - - +
632B ILE* 1.3 80.5 - - + +
634B GLU* 1.3 54.1 + - - +
636B ASP* 3.3 10.2 - - - +
637B ASN* 2.5 45.7 + - - +
----------------------------------------------------------
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Residues in contact with GLU 634 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
630B SER 2.9 19.1 + - - +
631B ASN* 4.0 5.8 - - - +
633B LYS* 1.3 76.6 - - - +
635B ALA* 1.3 59.5 + - - +
637B ASN* 3.2 10.0 + - - +
638B THR* 2.9 55.4 + - + +
641B PHE* 4.6 10.2 - - - -
----------------------------------------------------------
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Residues in contact with ALA 635 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476B LEU* 4.0 14.4 - - + -
480B LEU* 6.0 1.3 - - + -
521B TYR* 4.6 32.5 - - + -
631B ASN 2.9 21.0 + - - +
632B ILE* 3.3 6.1 - - - +
634B GLU* 1.3 76.3 - - - +
636B ASP* 1.3 55.4 - - - +
638B THR* 2.5 23.1 + - - -
639B VAL* 2.9 22.2 + - + +
----------------------------------------------------------
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Residues in contact with ASP 636 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476B LEU* 4.1 8.4 - - + +
479B LYS* 2.9 44.9 + - + +
632B ILE* 2.9 15.2 + - + +
633B LYS* 3.3 15.4 - - - +
635B ALA* 1.3 75.5 - - - +
637B ASN* 1.3 65.3 + - - +
639B VAL* 3.0 9.2 + - - +
640B MET* 3.0 35.0 + - - +
----------------------------------------------------------
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Residues in contact with ASN 637 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
633B LYS* 2.5 33.1 + - - +
634B GLU* 3.2 13.2 + - - +
636B ASP* 1.3 83.3 - - - +
638B THR* 1.3 58.2 + - - +
640B MET* 3.2 11.3 + - - +
641B PHE* 2.9 48.7 + - + -
----------------------------------------------------------
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Residues in contact with THR 638 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
517B LYS* 6.0 1.3 - - + +
521B TYR* 6.0 0.9 - - - -
634B GLU* 2.9 35.8 + - + +
635B ALA* 2.5 28.9 + - - -
637B ASN* 1.3 74.6 - - - +
639B VAL* 1.3 59.0 + - - +
641B PHE* 2.9 19.0 + - + +
642B MET* 2.9 52.1 + - + +
----------------------------------------------------------
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Residues in contact with VAL 639 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
476B LEU* 5.5 1.6 - - + -
479B LYS* 4.2 28.9 - - + +
480B LEU* 4.6 20.6 - - + -
482B PHE* 4.6 9.6 - - + -
483B PHE* 3.4 34.4 - - + -
518B ALA* 6.2 1.1 - - + -
635B ALA* 2.9 21.8 + - + +
636B ASP* 3.2 14.1 - - - +
638B THR* 1.3 75.4 + - - +
640B MET* 1.3 60.4 + - - +
642B MET* 5.0 2.2 - - + -
643B GLN* 2.8 29.6 + - - +
----------------------------------------------------------
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Residues in contact with MET 640 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
482A PHE* 5.6 5.4 - - + -
485A LYS* 3.6 45.5 - - + +
489A LEU* 5.8 5.6 - - + -
479B LYS* 6.0 3.8 - - - -
482B PHE* 5.3 7.6 - - - -
636B ASP* 3.0 27.4 + - - +
637B ASN* 3.5 14.6 - - - +
638B THR 3.1 0.2 - - - -
639B VAL* 1.3 84.6 - - - +
641B PHE* 1.3 63.5 + - + +
643B GLN* 3.3 19.9 - - + +
644B GLY* 2.9 25.6 + - - -
----------------------------------------------------------
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Residues in contact with PHE 641 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
634B GLU* 4.6 9.2 - - - -
637B ASN* 2.9 35.8 + - + -
638B THR* 2.9 25.3 + - + +
640B MET* 1.3 80.9 - - + +
642B MET* 1.3 61.8 + - + +
644B GLY* 3.8 0.5 - - - -
645B LYS* 2.8 34.2 + - + +
----------------------------------------------------------
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Residues in contact with MET 642 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
483B PHE* 3.6 23.5 - - + -
514B MET* 3.5 38.7 - - + +
517B LYS* 3.7 47.8 - - + +
638B THR* 2.9 44.6 + - + +
639B VAL* 4.5 2.5 - - + +
641B PHE* 1.3 77.2 - - + +
643B GLN* 1.3 60.2 + - - +
645B LYS* 3.7 16.8 - - + +
646B ARG* 2.9 30.3 + - - +
----------------------------------------------------------
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Residues in contact with GLN 643 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
482A PHE* 6.2 0.4 - - - -
486A SER* 5.2 6.1 + - - +
489A LEU* 6.0 4.0 - - + -
647A GLN* 5.9 0.2 - - - +
482B PHE* 3.5 21.1 - - + -
483B PHE* 3.4 23.0 - - + -
486B SER* 5.0 4.6 + - - -
639B VAL* 2.8 22.5 + - + +
640B MET* 3.3 27.6 - - + +
642B MET* 1.3 78.3 - - - +
644B GLY* 1.3 61.1 + - - +
646B ARG* 3.8 12.3 + - - +
647B GLN* 2.9 67.7 + - - +
----------------------------------------------------------
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Residues in contact with GLY 644 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
489A LEU* 5.6 7.2 - - - -
640B MET* 2.9 13.3 + - - +
641B PHE 3.8 0.9 - - - -
643B GLN* 1.3 80.4 - - - +
645B LYS* 1.3 49.7 + - - +
647B GLN* 4.3 10.3 - - - +
648B LYS* 2.6 38.6 + - - +
----------------------------------------------------------
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Residues in contact with LYS 645 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
507B MET* 5.6 0.2 - - - +
514B MET* 4.6 12.5 - - + +
641B PHE* 2.8 23.5 + - + +
642B MET* 3.7 16.8 - - + +
643B GLN 3.1 0.2 - - - -
644B GLY* 1.3 76.9 - - - +
646B ARG* 1.3 61.1 + - - +
648B LYS* 3.2 13.2 + - + +
649B GLU* 3.0 27.7 + - - +
----------------------------------------------------------
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Residues in contact with ARG 646 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
483B PHE* 3.2 48.1 + - - -
486B SER* 3.0 29.7 + - - -
487B ILE* 3.3 22.8 - - - +
490B ASP* 3.1 31.5 + - - +
507B MET* 5.6 0.7 - - - -
511B TRP* 3.6 44.8 - - + +
514B MET* 3.8 10.2 - - + +
642B MET 2.9 18.5 + - - +
643B GLN* 3.8 11.6 + - - +
645B LYS* 1.3 76.5 - - - +
647B GLN* 1.3 58.9 + - - +
648B LYS 3.2 0.2 + - - -
649B GLU* 3.3 6.6 + - - +
650B ILE* 3.0 33.1 + - + +
----------------------------------------------------------
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Residues in contact with GLN 647 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
486A SER* 3.6 22.9 + - - -
489A LEU* 4.3 26.9 - - - +
490A ASP* 4.4 14.4 + - - +
647A GLN* 4.8 13.3 - - - +
650A ILE* 6.2 1.4 - - - +
486B SER* 5.6 1.7 + - - +
490B ASP* 5.9 0.4 - - - +
643B GLN* 2.9 44.5 + - - +
644B GLY* 3.8 5.9 - - - -
646B ARG* 1.3 79.3 - - + +
648B LYS* 1.3 57.6 + - - +
650B ILE* 3.2 22.4 - - + +
651B TRP* 2.9 31.8 + - - +
----------------------------------------------------------
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Residues in contact with LYS 648 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
644B GLY 2.6 23.1 + - - +
645B LYS* 3.2 16.2 - - + +
646B ARG 3.1 0.4 - - - -
647B GLN* 1.3 78.1 - - - +
649B GLU* 1.3 57.2 + - - +
651B TRP* 3.1 35.4 + - + +
652B HIS* 2.9 27.9 + - + +
----------------------------------------------------------
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Residues in contact with GLU 649 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
507B MET* 3.7 38.4 - - + -
511B TRP* 5.8 0.9 - - + -
645B LYS 3.0 14.5 + - - +
646B ARG 4.0 2.7 - - - +
648B LYS* 1.3 74.3 - - - +
650B ILE* 1.3 60.7 + - - +
652B HIS* 4.2 17.3 - - - +
653B LEU* 2.9 72.1 + - + +
656B ILE* 4.7 1.2 - - - +
----------------------------------------------------------
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Residues in contact with ILE 650 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
650A ILE* 4.8 21.8 - - + -
654A LEU* 5.9 1.7 - - + +
490B ASP* 4.0 29.2 - - - +
497B GLN* 6.3 0.9 - - - +
511B TRP* 5.6 6.1 - - + -
646B ARG* 3.0 24.8 + - + +
647B GLN* 3.2 28.9 - - + +
648B LYS 3.1 0.2 - - - -
649B GLU* 1.3 76.9 - - - +
651B TRP* 1.3 61.9 + - + +
653B LEU* 4.7 0.8 - - - +
654B LEU* 2.6 35.8 + - + +
----------------------------------------------------------
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Residues in contact with TRP 651 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
493A ARG* 3.4 45.9 - - + +
647B GLN 2.9 22.3 + - - +
648B LYS* 3.1 45.2 + - + +
650B ILE* 1.3 79.2 - - + +
652B HIS* 1.3 78.4 + - + +
654B LEU* 3.2 17.8 - - + +
655B LYS* 2.9 64.5 + - + +
----------------------------------------------------------
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Residues in contact with HIS 652 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
648B LYS* 2.9 19.2 + - + +
649B GLU* 4.2 18.8 - - - +
651B TRP* 1.3 99.3 - + + +
653B LEU* 1.3 62.5 + - - +
655B LYS* 3.0 7.2 + - + +
656B ILE* 2.8 54.4 + - + +
----------------------------------------------------------
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Residues in contact with LEU 653 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
494B TYR* 5.4 1.8 - - + -
497B GLN* 4.6 15.0 - - - +
502B ILE* 4.4 20.4 - - + +
503B SER* 4.1 26.5 - - - +
507B MET* 5.9 0.7 - - + -
649B GLU* 2.9 40.2 + - + +
650B ILE 4.7 0.2 - - - +
652B HIS* 1.3 74.5 - - - +
654B LEU* 1.3 59.2 + - - +
656B ILE* 3.2 32.0 + - + +
657B ALA* 2.9 26.3 + - - +
----------------------------------------------------------
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Residues in contact with LEU 654 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
493A ARG* 5.6 2.7 - - + -
497A GLN* 3.5 33.0 - - + +
654A LEU* 4.5 32.1 - - + -
657A ALA* 5.2 7.0 - - + -
650B ILE* 2.6 26.9 + - + +
651B TRP* 3.2 23.3 - - + +
653B LEU* 1.3 76.3 - - - +
655B LYS* 1.3 64.8 + - + +
657B ALA* 3.1 11.2 + - - +
658B CYS* 2.9 36.7 + - - -
----------------------------------------------------------
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Residues in contact with LYS 655 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
493A ARG* 4.1 8.2 - - - +
496A GLU* 3.2 47.7 + - - +
497A GLN* 5.3 1.8 - - + +
500A TYR* 3.8 31.5 + - + +
651B TRP* 2.9 55.7 + - + +
652B HIS* 3.0 7.1 + - + +
654B LEU* 1.3 80.7 - - + +
656B ILE* 1.3 54.0 + - - +
658B CYS* 3.1 11.3 + - - +
659B THR* 2.7 34.9 + - - -
----------------------------------------------------------
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Residues in contact with ILE 656 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
649B GLU* 4.7 2.0 - - - +
652B HIS* 2.8 47.9 + - + +
653B LEU* 3.2 34.5 + - + +
655B LYS* 1.3 77.8 - - - +
657B ALA* 1.3 61.4 + - - +
659B THR* 3.1 23.3 + - - +
660B GLN* 4.0 5.2 + - - +
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Residues in contact with ALA 657 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
654A LEU* 5.5 4.5 - - + -
657A ALA* 4.6 29.2 - - + +
658A CYS* 5.4 9.6 - - - -
502B ILE* 6.3 3.6 - - + -
653B LEU 2.9 12.6 + - - +
654B LEU* 3.1 14.6 + - + +
656B ILE* 1.3 76.7 - - - +
658B CYS* 1.3 61.0 + - - +
659B THR 3.4 0.3 + - - -
660B GLN* 4.1 13.0 + - - +
----------------------------------------------------------
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Residues in contact with CYS 658 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
497A GLN* 6.1 1.8 - - - -
500A TYR* 3.7 47.9 - - + -
502A ILE* 4.8 11.4 - - - -
657A ALA* 5.4 7.9 - - - -
654B LEU* 2.9 31.8 + - - -
655B LYS* 3.1 17.4 + - - +
657B ALA* 1.3 77.5 - - - +
659B THR* 1.3 64.3 + - - +
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Residues in contact with THR 659 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
500A TYR* 5.9 0.2 - - - -
655B LYS 2.7 19.7 + - - -
656B ILE* 3.1 19.9 + - - +
658B CYS* 1.3 80.8 - - - +
660B GLN* 1.3 74.2 + - + +
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Residues in contact with GLN 660 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
660A GLN 5.1 6.6 - - - +
656B ILE 4.0 4.3 + - - +
657B ALA* 4.1 11.9 - - - +
658B CYS 3.6 0.4 - - - -
659B THR* 1.3 93.3 - - + +
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il