Contacts of the helix formed by residues 204 - 272 (chain G) in PDB entry 6CP3
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with ASN 204 (chain G).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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200G ASP 5.2 1.4 + - - -
201G THR 4.7 8.2 + - - -
203G ALA* 1.3 80.5 + - - +
205G VAL* 1.3 62.9 + - - +
206G PRO* 3.5 5.2 - - - -
207G ARG* 3.2 34.0 + - + +
208G ASP* 3.2 17.2 + - - +
4I ARG* 4.5 7.9 - - - +
39O ARG* 5.3 5.6 + - - -
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Residues in contact with VAL 205 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
199G ILE* 3.7 31.9 - - + -
200G ASP* 4.6 11.5 + - + +
203G ALA* 3.7 26.5 - - + +
204G ASN* 1.3 74.0 - - - +
206G PRO* 1.3 68.9 - - + +
208G ASP* 3.4 0.9 + - - +
209G LEU* 2.8 32.8 + - + +
35H LYS* 6.1 0.2 - - + -
49H VAL* 4.1 28.7 - - + +
50H GLU* 6.0 0.2 - - - -
51H GLN* 4.6 18.2 - - + +
74H PHE* 4.1 13.2 - - + -
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Residues in contact with PRO 206 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
185G ALA* 3.4 17.8 - - + +
188G ILE* 4.5 13.4 - - + +
189G GLU* 3.3 30.7 - - + +
194G PHE* 4.6 8.7 - - + -
199G ILE* 3.9 18.2 - - + -
200G ASP 5.2 4.7 - - - +
204G ASN* 3.9 2.2 - - - -
205G VAL* 1.3 92.4 - - + +
207G ARG* 1.3 59.4 + - + +
208G ASP 3.1 0.2 - - - -
209G LEU* 4.3 6.7 - - + -
210G PHE* 2.9 34.1 + - - +
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Residues in contact with ARG 207 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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157G GLY 5.8 1.6 + - - -
185G ALA* 4.4 20.9 - - - +
186G LYS* 4.9 16.1 - - - +
189G GLU* 5.7 3.7 + - - -
204G ASN* 3.2 30.3 + - + +
206G PRO* 1.3 77.2 - - + +
208G ASP* 1.3 60.0 + - - +
210G PHE* 4.6 3.8 - - - +
211G GLU* 4.1 13.9 - - - +
4I ARG* 3.1 36.6 + - - +
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Residues in contact with ASP 208 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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203G ALA 4.3 2.4 - - - +
204G ASN* 3.2 13.4 + - - +
205G VAL 4.2 1.3 - - - +
206G PRO 3.1 0.2 - - - -
207G ARG* 1.3 77.5 - - - +
209G LEU* 1.3 59.8 + - - +
210G PHE 3.2 1.6 - - - -
211G GLU* 3.2 4.6 + - - +
212G TYR* 3.0 22.2 + - - +
51H GLN* 2.9 32.1 + - - +
74H PHE* 4.2 3.1 - - + -
3I TRP* 5.0 4.8 - - - -
4I ARG* 2.4 36.1 + - - -
10I TYR* 3.6 45.3 - - + +
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Residues in contact with LEU 209 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
48G GLU* 4.2 18.4 - - + +
51G PHE* 4.2 28.3 - - + -
52G TYR* 4.3 7.4 - - - +
188G ILE* 5.1 11.7 - - + -
194G PHE* 6.5 0.2 - - + -
199G ILE* 5.6 4.3 - - + -
205G VAL* 2.8 22.0 + - + +
206G PRO* 4.1 4.9 - - + +
208G ASP* 1.3 74.4 - - - +
210G PHE* 1.3 56.4 + - - +
213G THR* 2.7 41.6 + - - +
49H VAL* 4.2 16.8 - - + -
74H PHE* 3.6 43.0 - - + -
76H THR* 5.9 1.1 - - - +
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Residues in contact with PHE 210 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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52G TYR* 5.3 0.2 - - - -
151G LEU* 4.1 21.5 - - + -
156G ALA* 4.6 6.3 - - + -
157G GLY* 4.7 14.1 - - - -
162G ILE* 4.1 20.2 - - + -
182G ILE* 3.8 20.4 - - + -
183G PHE 3.3 21.3 - - - +
184G ASN* 3.6 24.7 - - + -
185G ALA* 3.8 19.7 - - + +
188G ILE* 5.0 4.4 - - + +
206G PRO 2.9 17.9 + - - +
207G ARG* 5.0 3.6 - - - -
209G LEU* 1.3 76.5 - - - +
211G GLU* 1.3 66.3 + - + +
213G THR* 3.3 5.9 + - - -
214G LEU* 2.9 32.2 + - + +
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Residues in contact with GLU 211 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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147G ALA* 4.9 1.6 - - + +
151G LEU* 3.6 29.2 - - + +
207G ARG 4.1 18.0 - - - +
208G ASP* 3.2 8.1 + - - +
210G PHE* 1.3 81.5 - - + +
212G TYR* 1.3 58.6 + - - +
214G LEU* 3.3 8.2 + - - +
215G ALA* 2.9 27.0 + - - +
4I ARG* 4.4 13.5 + - - -
9I SER* 3.3 18.0 - - - -
10I TYR* 2.6 37.2 + - - +
11I ALA* 4.0 15.6 - - + +
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Residues in contact with TYR 212 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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44G MET* 5.1 1.0 - - - -
48G GLU* 3.3 25.8 - - - +
140G PHE* 4.5 16.4 - + - -
208G ASP 3.0 9.8 + - - +
209G LEU 3.8 2.7 - - - +
210G PHE 3.3 0.2 - - - -
211G GLU* 1.3 73.8 - - - +
213G THR* 1.3 60.3 + - - +
215G ALA* 3.3 8.8 + - + +
216G ASN* 3.0 48.5 + - - +
73H GLY* 4.5 3.4 - - - -
74H PHE* 3.5 40.4 - + + -
86H THR* 2.8 44.3 + - + +
87H ALA* 3.8 7.8 + - - -
88H ILE* 5.2 3.6 - - + +
10I TYR* 4.3 15.4 - + + -
11I ALA* 5.0 4.3 - - - -
14I LEU* 4.3 17.9 - - + -
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Residues in contact with THR 213 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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48G GLU* 3.1 19.6 + - - +
49G GLN* 4.7 2.2 - - - +
52G TYR* 2.8 41.6 + - + +
182G ILE* 4.8 15.0 - - + -
183G PHE 5.4 4.7 - - - +
209G LEU* 2.7 23.3 + - - +
210G PHE* 3.5 7.4 - - - -
212G TYR* 1.3 73.9 - - - +
214G LEU* 1.3 59.3 + - - +
216G ASN* 3.9 0.3 - - - +
217G GLN* 2.9 49.9 + - + +
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Residues in contact with LEU 214 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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147G ALA* 4.0 24.9 - - + +
150G LEU* 3.8 34.3 - - + -
151G LEU* 4.5 15.0 - - + -
156G ALA* 5.6 3.8 - - + -
162G ILE* 5.1 9.4 - - + -
164G ILE* 5.0 5.8 - - + -
182G ILE* 4.2 30.0 - - + +
210G PHE* 2.9 21.0 + - + +
211G GLU* 3.6 10.1 - - - +
213G THR* 1.3 75.7 - - - +
215G ALA* 1.3 62.3 + - - +
217G GLN* 4.8 1.6 - - + -
218G MET* 3.0 33.9 + - + +
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Residues in contact with ALA 215 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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140G PHE* 4.0 21.9 - - + -
143G SER* 3.2 10.6 + - - -
144G ALA* 4.7 3.6 - - - +
147G ALA* 4.0 13.2 - - + +
211G GLU 2.9 13.7 + - - +
212G TYR* 3.5 11.2 - - + +
213G THR 3.2 0.2 - - - -
214G LEU* 1.3 76.7 - - - +
216G ASN* 1.3 59.5 + - - +
219G LEU* 2.9 25.1 + - - +
11I ALA* 3.7 22.0 - - + -
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Residues in contact with ASN 216 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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44G MET* 3.3 29.0 + - + +
45G ASP* 4.6 11.4 - - - +
48G GLU* 3.0 28.3 + - - +
140G PHE* 3.3 20.9 - - - -
212G TYR* 3.0 38.8 + - - +
213G THR 4.5 0.9 - - - +
215G ALA* 1.3 77.5 - - - +
217G GLN* 1.3 59.7 + - + +
219G LEU* 3.7 3.4 - - - +
220G THR* 2.9 33.6 + - - +
86H THR* 3.6 10.7 - - - +
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Residues in contact with GLN 217 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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45G ASP* 2.4 35.2 + - - +
48G GLU* 6.3 1.2 - - - +
49G GLN* 3.1 24.3 - - - +
164G ILE* 5.1 5.2 - - + +
180G LYS* 3.2 35.0 - - + +
182G ILE* 3.6 27.4 - - + -
213G THR* 2.9 30.6 + - + +
214G LEU* 4.2 1.3 - - + +
216G ASN* 1.3 76.8 - - + +
218G MET* 1.3 57.8 + - - +
220G THR* 3.4 6.7 + - - +
221G ALA* 2.9 27.4 + - - +
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Residues in contact with MET 218 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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75G VAL* 3.8 28.3 - - + -
77G ILE* 4.6 5.4 - - + -
110G ILE* 3.9 9.4 - - + -
143G SER* 3.2 16.4 - - - +
146G ILE* 3.6 32.8 - - - -
147G ALA* 4.8 2.9 - - - -
150G LEU* 3.7 26.0 - - + -
164G ILE* 4.2 17.6 - - + +
214G LEU* 3.0 23.4 + - + +
217G GLN* 1.3 77.2 - - - +
219G LEU* 1.3 57.8 + - - +
221G ALA* 3.5 5.9 - - + +
222G MET* 2.9 39.7 + - + +
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Residues in contact with LEU 219 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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41G ALA* 5.2 6.1 - - + -
44G MET* 3.9 14.6 - - + -
138G PRO* 4.2 15.5 - - + +
139G THR 3.4 30.1 - - - +
140G PHE* 3.6 26.5 - - + +
143G SER* 2.9 18.6 + - - +
215G ALA 2.9 14.3 + - - +
216G ASN* 3.7 6.5 - - - +
218G MET* 1.3 77.1 - - - +
220G THR* 1.3 57.8 + - - +
222G MET* 3.3 1.4 + - + -
223G ALA* 2.9 32.8 + - + +
17H PRO* 3.8 24.2 - - + +
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Residues in contact with THR 220 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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41G ALA* 3.6 26.7 + - + +
42G LYS* 5.0 6.7 - - + +
44G MET* 5.8 1.7 - - - +
45G ASP* 3.6 32.2 - - + +
166G TYR* 6.4 0.4 - - + -
216G ASN* 2.9 18.7 + - - +
217G GLN* 3.8 9.0 - - - +
219G LEU* 1.3 75.7 - - - +
221G ALA* 1.3 55.9 + - - +
223G ALA 3.6 0.3 - - - -
224G GLN* 2.9 51.5 + - + +
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Residues in contact with ALA 221 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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77G ILE* 3.7 26.4 - - + +
164G ILE* 3.8 19.5 - - + -
166G TYR* 4.0 22.5 - - + +
217G GLN 2.9 18.1 + - - +
218G MET* 3.5 6.7 - - - +
219G LEU 3.2 0.2 - - - -
220G THR* 1.3 76.8 - - - +
222G MET* 1.3 57.5 + - - +
224G GLN* 4.1 0.2 - - - +
225G GLY* 2.9 27.7 + - - -
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Residues in contact with MET 222 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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77G ILE* 3.8 31.4 - - + +
110G ILE* 5.0 2.5 - - + -
133G ILE* 3.7 43.5 - - + -
138G PRO* 3.6 30.4 - - + +
142G GLU* 4.2 7.0 - - + +
143G SER* 4.0 25.1 - - - -
146G ILE* 4.4 12.3 - - + -
218G MET* 2.9 24.6 + - + +
219G LEU* 4.0 3.8 - - - +
221G ALA* 1.3 76.7 - - - +
223G ALA* 1.3 57.6 + - - +
224G GLN 3.1 0.2 - - - -
226G TYR* 2.9 32.9 + - - +
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Residues in contact with ALA 223 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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34G ALA 4.9 0.5 - - - +
37G ALA* 3.8 30.9 - - + +
38G LYS* 3.4 25.6 + - - +
41G ALA* 4.1 8.7 - - + +
138G PRO* 3.9 19.9 - - + +
219G LEU* 2.9 20.5 + - + +
220G THR 3.6 2.0 - - - -
222G MET* 1.3 73.8 - - - +
224G GLN* 1.3 56.5 - - - +
226G TYR* 4.5 5.6 - - - -
227G ALA* 4.7 3.6 - - - +
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Residues in contact with GLN 224 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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38G LYS* 4.0 24.2 - - + +
42G LYS* 4.4 13.4 - - - +
166G TYR* 3.4 24.4 + - + -
167G ASN 3.4 7.1 - - - +
168G ASP* 2.5 34.6 + - - -
169G PRO* 3.7 15.2 - - + +
220G THR* 2.9 33.7 + - + +
221G ALA 4.1 1.1 - - - +
223G ALA* 1.3 79.8 - - - +
225G GLY* 1.3 60.1 + - - +
226G TYR 3.2 1.3 - - - -
227G ALA* 3.4 3.7 + - - +
228G ALA* 3.0 22.3 + - - +
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Residues in contact with GLY 225 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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77G ILE* 4.9 12.3 - - - -
78G THR* 6.5 0.4 - - - -
167G ASN* 3.7 28.0 + - - +
221G ALA 2.9 16.9 + - - -
222G MET 3.9 0.2 - - - -
224G GLN* 1.3 74.5 - - - +
226G TYR* 1.3 60.3 + - - +
228G ALA* 3.7 2.4 - - - +
229G GLU* 2.9 29.7 + - - +
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Residues in contact with TYR 226 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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30G ARG* 4.2 15.1 + - - +
33G LYS* 5.5 3.6 - - + +
34G ALA* 3.7 27.1 - - + -
37G ALA* 6.2 0.4 - - + -
77G ILE* 5.6 0.4 - - - +
133G ILE* 6.1 2.0 - - + -
134G GLY* 3.4 26.3 + - - -
135G LYS 4.3 1.4 + - - -
136G ASP* 3.2 36.8 + - - -
137G ALA* 3.6 19.0 + - + -
138G PRO* 4.3 7.9 - - + -
222G MET 2.9 20.0 + - - +
223G ALA* 4.5 4.3 - - - -
225G GLY* 1.3 76.7 - - - +
227G ALA* 1.3 56.8 + - - +
229G GLU* 3.3 19.6 + - - +
230G ILE* 3.0 57.4 + - + +
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Residues in contact with ALA 227 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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31G LEU* 3.6 16.7 - - + +
34G ALA* 4.5 19.1 - - + +
35G GLU* 5.2 4.0 - - - +
38G LYS* 4.2 25.4 - - + -
169G PRO* 4.6 4.3 - - + -
223G ALA 4.7 2.6 + - - +
224G GLN* 3.4 9.5 + - - +
226G TYR* 1.3 83.4 - - - +
228G ALA* 1.3 57.6 + - - +
230G ILE* 4.7 0.9 - - - -
231G SER* 2.9 34.0 + - - +
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Residues in contact with ALA 228 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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87G ILE* 5.0 3.8 - - + +
167G ASN* 3.4 40.6 - - + +
168G ASP 4.6 0.7 - - - -
169G PRO* 3.6 22.6 - - + +
175G PHE* 5.6 7.2 - - + +
224G GLN 3.0 10.0 + - - +
225G GLY 3.7 4.5 - - - +
226G TYR 3.2 0.2 - - - -
227G ALA* 1.3 74.1 - - - +
229G GLU* 1.3 64.5 + - - +
231G SER* 3.4 2.5 + - - -
232G ALA* 3.0 26.3 + - - +
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Residues in contact with GLU 229 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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78G THR 5.4 0.3 - - - -
79G SER* 3.4 35.7 + - - +
81G LYS* 4.8 6.6 - - - +
82G GLY 4.8 4.5 - - - +
84G CYS* 3.8 23.0 - - + +
87G ILE* 5.3 7.3 - - + +
134G GLY* 5.3 6.0 - - - +
167G ASN* 6.3 0.4 - - - +
225G GLY 2.9 17.7 + - - +
226G TYR* 3.5 22.2 - - - +
228G ALA* 1.3 75.3 - - - +
230G ILE* 1.3 65.2 + - + +
232G ALA* 3.3 2.8 + - - -
233G ARG* 2.8 51.5 + - + +
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Residues in contact with ILE 230 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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27G ALA* 3.3 32.8 - - + +
30G ARG* 3.9 25.1 - - + +
31G LEU* 3.7 23.1 - - + +
34G ALA* 5.2 0.7 - - + -
226G TYR* 3.0 58.6 + - + +
227G ALA* 4.7 0.2 - - - -
229G GLU* 1.3 84.5 - - + +
231G SER* 1.3 58.1 + - - +
233G ARG* 3.8 14.7 - - - +
234G ARG* 2.8 28.2 + - - +
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Residues in contact with SER 231 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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31G LEU* 3.3 27.4 - - - +
35G GLU* 5.5 1.4 + - - -
169G PRO* 5.1 8.7 - - - +
171G SER 5.3 0.2 - - - -
172G SER* 4.0 28.1 - - - +
174G SER 5.9 0.4 - - - -
227G ALA* 2.9 20.6 + - - +
228G ALA* 3.9 5.4 - - - -
229G GLU 3.3 0.2 - - - -
230G ILE* 1.3 76.9 - - - +
232G ALA* 1.3 57.1 + - - +
234G ARG* 3.3 5.2 + - - +
235G ASN* 3.0 27.4 + - - +
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Residues in contact with ALA 232 (chain G).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
84G CYS 3.2 22.5 - - - +
86G SER 5.8 0.7 - - - +
87G ILE* 3.7 24.7 - - + -
175G PHE* 5.7 7.0 - - + -
228G ALA 3.0 18.2 + - - +
229G GLU 3.9 2.0 - - - +
231G SER* 1.3 76.5 - - - +
233G ARG* 1.3 56.9 + - - +
235G ASN* 3.3 8.5 + - - +
236G ALA* 2.9 23.0 + - - +
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Residues in contact with ARG 233 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
395D GLU* 2.7 42.5 + - - -
23G MET* 4.2 17.1 - - - +
27G ALA* 5.0 10.5 - - + +
30G ARG* 4.7 16.0 - - - +
81G LYS* 4.4 19.4 - - - +
82G GLY 4.6 9.5 + - - -
83G LEU* 3.3 20.6 + - - +
84G CYS* 3.7 15.2 - - + +
229G GLU* 2.8 37.5 + - - +
230G ILE* 3.8 15.6 - - - +
232G ALA* 1.3 74.6 - - - +
234G ARG* 1.3 61.1 + - - +
236G ALA* 3.3 1.8 + - - +
237G MET* 2.9 42.9 + - + +
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Residues in contact with ARG 234 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
387E ILE* 6.0 2.4 - - - +
390E ILE* 4.7 15.4 - - - +
24G LYS* 4.0 36.5 + - + +
27G ALA* 4.3 13.2 - - + +
28G SER* 3.5 35.8 + - - +
31G LEU* 4.3 17.0 - - - +
172G SER* 5.8 6.3 - - - -
173G LEU* 5.6 7.7 - - - +
230G ILE 2.8 19.3 + - - +
231G SER* 3.5 5.6 - - - +
233G ARG* 1.3 77.6 - - - +
235G ASN* 1.3 59.2 + - - +
237G MET* 3.4 4.8 + - - +
238G ASP* 2.9 30.1 + - + +
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Residues in contact with ASN 235 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
408B PHE 3.8 18.7 + - - +
172G SER 5.4 1.6 - - - +
173G LEU* 3.4 43.2 + - + +
231G SER 3.0 13.4 + - - +
232G ALA* 3.6 11.2 - - - +
234G ARG* 1.3 79.3 - - - +
236G ALA* 1.3 57.8 + - - +
238G ASP* 3.2 11.9 + - - +
239G ASN* 3.0 39.0 + - - +
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Residues in contact with ALA 236 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
391F LEU* 5.1 8.9 - - + +
395F GLU* 5.6 1.1 - - + +
83G LEU 4.4 7.0 - - - +
84G CYS 4.2 17.0 - - - +
85G GLY* 4.5 6.5 - - - +
232G ALA 2.9 17.5 + - - +
233G ARG* 3.3 5.8 + - - +
235G ASN* 1.3 77.4 - - - +
237G MET* 1.3 61.5 + - - +
239G ASN* 3.3 9.0 + - - +
240G ALA* 2.9 26.5 + - - +
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Residues in contact with MET 237 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
391D LEU* 4.2 19.3 - - + -
391F LEU* 5.2 8.5 - - + -
20G THR* 3.7 39.7 - - + +
23G MET* 3.7 38.6 - - + +
24G LYS* 4.1 13.2 - - + +
27G ALA* 5.7 0.9 - - + -
83G LEU* 4.8 17.0 - - - +
233G ARG* 2.9 29.1 + - + +
234G ARG* 4.0 4.3 - - - +
236G ALA* 1.3 76.7 - - - +
238G ASP* 1.3 60.3 + - - +
240G ALA* 3.3 7.2 + - + +
241G SER* 2.9 32.2 + - - -
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Residues in contact with ASP 238 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
21G LYS* 5.2 1.9 + - - -
24G LYS* 3.3 30.4 + - + +
234G ARG* 2.9 18.1 + - + +
235G ASN* 3.4 18.3 - - - +
237G MET* 1.3 77.5 - - - +
239G ASN* 1.3 61.7 + - - +
241G SER* 3.3 4.9 + - - -
242G LYS* 3.0 30.4 + - - +
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Residues in contact with ASN 239 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407B GLN* 4.0 23.8 + - - +
408B PHE* 4.1 34.1 + - + +
390F ILE 4.7 0.7 - - - -
391F LEU 5.1 7.6 - - - +
235G ASN* 3.0 32.3 + - - +
236G ALA* 3.8 9.9 - - - +
238G ASP* 1.3 79.6 - - - +
240G ALA* 1.3 56.9 + - - +
242G LYS* 3.9 8.8 - - - +
243G ASN* 2.9 41.0 + - - +
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Residues in contact with ALA 240 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
390F ILE* 3.8 16.5 + - + +
391F LEU* 3.8 24.2 + - + -
20G THR* 3.8 24.1 + - + +
236G ALA 2.9 16.5 + - - +
237G MET* 3.5 9.9 - - + +
238G ASP 3.2 0.4 - - - -
239G ASN* 1.3 78.7 - - - +
241G SER* 1.3 56.5 + - - +
243G ASN* 3.9 0.9 - - - +
244G ALA* 2.9 30.7 + - - +
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Residues in contact with SER 241 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
17G GLU* 4.1 12.2 - - - +
20G THR* 2.9 26.7 + - - -
21G LYS* 3.2 40.6 + - - -
24G LYS* 5.0 1.5 - - - +
237G MET 2.9 14.7 + - - -
238G ASP* 3.3 6.5 + - - -
240G ALA* 1.3 76.0 - - - +
242G LYS* 1.3 58.2 + - - +
244G ALA* 3.4 4.0 + - - +
245G GLY* 3.0 24.4 + - - -
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Residues in contact with LYS 242 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407B GLN* 3.2 27.8 + - - +
238G ASP* 3.0 20.5 + - - +
239G ASN* 3.9 10.1 - - - +
241G SER* 1.3 78.3 - - - +
243G ASN* 1.3 70.8 + - - +
245G GLY* 3.3 2.8 + - - -
246G ASP* 3.0 29.0 + - + +
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Residues in contact with ASN 243 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
407B GLN* 4.2 21.0 + - - +
408B PHE* 6.3 1.2 - - - -
388F ILE 5.5 0.8 + - - -
389F ALA 3.5 27.1 + - - +
390F ILE* 3.8 16.4 + - - +
391F LEU 5.4 3.0 + - - -
239G ASN* 2.9 27.6 + - - +
240G ALA 4.1 0.4 - - - +
242G LYS* 1.3 81.6 + - - +
244G ALA* 1.3 61.2 + - - +
246G ASP* 3.8 8.5 - - - +
247G MET* 2.9 31.5 + - - +
250G ARG* 5.4 0.3 + - - -
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Residues in contact with ALA 244 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
390F ILE* 4.7 10.9 - - + +
13G ILE* 4.4 8.6 - - + +
16G ILE* 4.7 9.6 - - + -
17G GLU* 3.7 33.9 - - + +
20G THR* 4.8 0.2 - - - +
240G ALA 2.9 19.2 + - - +
241G SER 3.7 2.9 - - - +
242G LYS 3.3 0.2 - - - -
243G ASN* 1.3 77.2 - - - +
245G GLY* 1.3 55.7 + - - +
247G MET* 3.9 1.2 - - - +
248G ILE* 2.9 37.0 + - - +
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Residues in contact with GLY 245 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
17G GLU* 3.9 19.8 - - - -
241G SER 3.0 15.9 + - - -
242G LYS* 3.3 4.0 + - - -
244G ALA* 1.3 77.0 - - - +
246G ASP* 1.3 55.8 + - - +
248G ILE* 3.4 5.3 + - - +
249G ASN* 3.0 34.5 + - - -
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Residues in contact with ASP 246 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
357B GLU* 5.3 4.7 - - - +
242G LYS* 3.0 24.8 + - + +
243G ASN* 3.8 11.9 - - - +
245G GLY* 1.3 76.4 - - - +
247G MET* 1.3 59.3 + - - +
249G ASN* 3.0 24.6 + - - +
250G ARG* 3.0 33.8 + - - +
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Residues in contact with MET 247 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
386F ASP* 5.5 4.9 - - + +
389F ALA* 4.4 17.5 - - + -
390F ILE* 3.7 28.7 - - + -
9G ARG* 5.3 6.7 - - - +
13G ILE* 3.7 31.6 - - + -
243G ASN 2.9 16.3 + - - +
244G ALA* 4.3 1.8 - - - +
246G ASP* 1.3 74.8 - - - +
248G ILE* 1.3 61.0 + - - +
250G ARG* 3.2 36.0 + - - +
251G TYR* 2.9 49.4 + - + -
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Residues in contact with ILE 248 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
10G LEU* 4.5 17.0 - - + -
13G ILE* 3.5 39.5 - - + +
14G LYS* 3.7 27.4 - - + -
17G GLU* 3.3 26.7 - - + +
244G ALA 2.9 18.3 + - - +
245G GLY* 3.6 5.6 - - - +
247G MET* 1.3 77.6 - - - +
249G ASN* 1.3 61.3 + - - +
251G TYR* 4.3 0.6 - - - +
252G SER* 2.9 33.5 + - - -
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Residues in contact with ASN 249 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
245G GLY 3.0 20.7 + - - -
246G ASP* 3.0 14.7 + - - +
248G ILE* 1.3 79.9 - - - +
250G ARG* 1.3 58.5 + - - +
252G SER* 3.7 8.5 + - - -
253G ILE* 3.4 26.9 - - - +
----------------------------------------------------------
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Residues in contact with ARG 250 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
389F ALA* 5.5 4.9 - - - +
243G ASN 5.4 0.2 + - - -
246G ASP* 3.0 31.1 + - - +
247G MET* 3.3 44.2 - - + +
248G ILE 3.1 0.4 - - - -
249G ASN* 1.3 78.3 - - - +
251G TYR* 1.3 64.5 + - + +
252G SER 3.2 0.2 - - - -
253G ILE* 3.1 11.3 + - + +
254G LEU* 3.0 32.1 + - + +
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Residues in contact with TYR 251 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
6G VAL* 4.1 18.7 - - + +
9G ARG* 3.0 50.2 + - + -
10G LEU* 3.7 25.0 - - + +
13G ILE* 4.5 10.8 - - + -
247G MET* 2.9 55.9 + - + +
248G ILE* 4.7 0.4 - - - -
250G ARG* 1.3 76.4 - - + +
252G SER* 1.3 61.2 + - - +
254G LEU* 3.7 24.8 - - + +
255G TYR* 2.8 28.8 + - - +
----------------------------------------------------------
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Residues in contact with SER 252 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
10G LEU* 4.1 12.2 - - - +
248G ILE* 2.9 20.9 + - - -
249G ASN* 3.7 15.8 + - - -
251G TYR* 1.3 76.9 - - - +
253G ILE* 1.3 63.0 + - - +
255G TYR* 3.2 7.8 + - - +
256G ASN* 2.8 42.1 + - - +
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Residues in contact with ILE 253 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
332B GLN 4.8 6.3 - - - +
333B GLY* 3.5 30.1 - - - +
318E THR* 5.8 9.2 - - + -
249G ASN 3.4 19.5 - - - +
250G ARG* 3.1 10.6 + - + +
252G SER* 1.3 77.9 + - - +
254G LEU* 1.3 60.7 + - + +
256G ASN* 3.4 9.6 + - + +
257G ARG* 3.0 56.0 + - + +
----------------------------------------------------------
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Residues in contact with LEU 254 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
6G VAL* 4.3 11.9 - - + -
250G ARG* 3.0 22.2 + - + +
251G TYR* 3.8 29.4 - - + +
253G ILE* 1.3 78.5 - - + +
255G TYR* 1.3 57.0 + - - +
257G ARG* 3.4 31.8 - - - +
258G THR* 2.8 37.9 + - - +
----------------------------------------------------------
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Residues in contact with TYR 255 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
335A ASP* 5.2 5.5 + - - -
337A SER* 5.8 1.9 - - - -
3G LEU* 3.9 32.7 - - + +
6G VAL* 3.8 22.2 - - + +
7G GLU* 3.7 41.5 + - + -
10G LEU* 4.7 15.0 - - + -
251G TYR 2.8 22.1 + - - +
252G SER* 3.5 8.5 - - - +
254G LEU* 1.3 72.3 - - - +
256G ASN* 1.3 70.1 + - - +
258G THR* 3.3 3.8 + - - -
259G ARG* 2.9 42.8 + - - +
----------------------------------------------------------
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Residues in contact with ASN 256 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
315E ASP 5.5 0.8 + - - +
316E ASP* 2.9 43.6 + - - +
318E THR* 3.7 16.2 + - + +
252G SER* 2.8 26.9 + - - +
253G ILE* 3.9 8.8 - - - +
255G TYR* 1.3 87.8 - - - +
257G ARG* 1.3 64.9 + - + +
259G ARG* 3.4 7.2 + - - +
260G GLN* 3.0 32.0 + - - +
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Residues in contact with ARG 257 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
294B GLU* 5.4 9.8 - - - +
332B GLN* 5.9 2.7 - - + +
335B ASP* 2.7 44.6 + - - +
337B SER* 5.0 10.9 + - - -
338B ALA* 5.5 4.0 - - - -
318E THR* 5.8 4.3 - - + +
253G ILE* 3.0 44.7 + - + +
254G LEU* 3.4 36.1 - - - +
256G ASN* 1.3 76.3 - - + +
258G THR* 1.3 58.3 + - - +
260G GLN* 3.9 9.2 - - - +
261G ALA* 2.9 31.5 + - - +
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Residues in contact with THR 258 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1G ALA* 4.2 10.0 + - - +
2G THR 3.6 24.9 - - - +
3G LEU* 3.7 21.1 - - + +
6G VAL* 4.5 9.2 - - - +
254G LEU* 2.8 25.9 + - - +
255G TYR* 3.7 5.8 - - - -
257G ARG* 1.3 77.2 - - - +
259G ARG* 1.3 56.5 + - - +
261G ALA* 3.4 4.2 + - - +
262G VAL* 2.9 35.7 + - + +
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Residues in contact with ARG 259 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
293A ARG* 4.3 9.1 - - - +
337A SER* 3.4 31.0 + - - -
279E VAL* 5.2 6.1 - - - +
313E PRO* 4.7 0.4 + - - +
314E ALA* 4.7 12.6 - - - +
316E ASP* 3.1 33.7 + - - +
319E ASP* 4.4 19.2 + - - +
3G LEU* 3.7 24.2 - - + +
255G TYR* 2.9 32.1 + - + +
256G ASN* 3.8 6.5 + - - +
258G THR* 1.3 77.4 - - - +
260G GLN* 1.3 67.4 + - - +
262G VAL* 3.3 1.9 + - - +
263G ILE* 3.0 50.9 + - + +
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Residues in contact with GLN 260 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
279E VAL* 3.9 28.5 - - + +
316E ASP* 4.4 4.8 + - - -
318E THR* 3.1 49.8 + - - +
319E ASP* 3.2 12.9 - - - +
320E PRO* 4.7 2.1 - - - +
256G ASN 3.0 17.9 + - - +
257G ARG* 4.1 8.7 - - - +
259G ARG* 1.3 86.5 - - - +
261G ALA* 1.3 63.6 + - - +
263G ILE* 3.4 4.4 + - - +
264G THR* 3.0 29.6 + - - +
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Residues in contact with ALA 261 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
294B GLU* 5.1 18.6 - - + +
257G ARG 2.9 19.8 + - - +
258G THR* 3.9 4.9 - - - +
260G GLN* 1.3 77.1 - - - +
262G VAL* 1.3 59.5 + - + +
264G THR* 4.7 3.4 - - - -
265G ASN* 2.8 48.5 + - - +
----------------------------------------------------------
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Residues in contact with VAL 262 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
2G THR* 5.9 0.7 - - - -
3G LEU* 5.0 17.5 - - + +
258G THR* 2.9 33.1 + - + +
259G ARG* 3.8 5.6 - - - +
260G GLN 3.2 0.2 - - - -
261G ALA* 1.3 74.9 - - + +
263G ILE* 1.3 64.8 + - + +
265G ASN* 3.5 4.0 - - - -
266G GLU* 2.9 40.0 + - + +
----------------------------------------------------------
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Residues in contact with ILE 263 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
293A ARG* 4.1 41.1 - - + +
294A GLU* 5.7 6.1 - - + +
337A SER* 5.2 3.4 - - - +
279E VAL* 3.2 33.7 - - + +
259G ARG* 3.0 42.2 + - + +
260G GLN 4.1 2.7 - - - +
262G VAL* 1.3 78.9 - - + +
264G THR* 1.3 57.1 + - - +
266G GLU* 3.5 17.3 - - + +
267G LEU* 2.9 29.6 + - + +
----------------------------------------------------------
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Residues in contact with THR 264 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
292B GLY 5.3 0.2 - - - +
294B GLU* 4.3 9.4 - - - +
295B ALA* 4.1 33.9 - - + +
277E SER 4.6 3.6 - - - +
278E ALA* 3.5 24.0 - - - +
279E VAL* 3.6 10.2 + - - +
260G GLN 3.0 19.2 + - - -
261G ALA* 4.1 4.3 - - - -
263G ILE* 1.3 77.9 - - - +
265G ASN* 1.3 61.6 + - - +
266G GLU 3.2 0.2 - - - -
267G LEU* 3.2 5.7 + - + +
268G VAL* 3.0 38.7 + - + +
----------------------------------------------------------
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Residues in contact with ASN 265 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
292B GLY 4.7 8.0 - - - +
293B ARG* 5.1 4.7 - - - +
294B GLU* 4.8 8.8 + - - +
294C GLU* 6.1 0.9 - - - +
279F VAL* 4.7 19.6 - - - +
261G ALA* 2.8 38.5 + - - +
262G VAL* 3.5 4.9 - - - +
264G THR* 1.3 80.9 - - - +
266G GLU* 1.3 57.0 + - - +
268G VAL* 4.5 10.9 - - - +
269G ASP* 4.1 14.4 - - - +
----------------------------------------------------------
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Residues in contact with GLU 266 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
294A GLU* 3.3 35.1 + - - +
278D ALA* 6.2 2.0 - - - -
279D VAL* 4.8 25.3 - - - +
262G VAL* 2.9 24.9 + - + +
263G ILE* 3.5 19.7 - - + +
265G ASN* 1.3 78.0 - - - +
267G LEU* 1.3 62.4 + - + +
268G VAL 3.2 1.6 - - - -
269G ASP* 3.3 7.2 + - - +
270G ILE* 3.0 38.5 + - + +
----------------------------------------------------------
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Residues in contact with LEU 267 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
291A PRO 5.2 0.2 - - - +
292A GLY* 3.2 31.6 - - - +
293A ARG* 4.2 9.4 - - - -
294A GLU 4.7 1.3 - - - +
276E PRO* 3.8 29.4 - - + +
277E SER 4.1 11.9 - - - +
279E VAL 4.2 5.8 - - - +
280E GLY* 4.1 21.3 - - - -
263G ILE* 2.9 19.7 + - + +
264G THR* 3.2 5.4 + - + +
266G GLU* 1.3 75.3 - - + +
268G VAL* 1.3 60.2 + - + +
270G ILE* 3.4 13.8 + - + -
271G ILE* 3.0 40.4 + - + +
----------------------------------------------------------
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Residues in contact with VAL 268 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
291B PRO* 3.9 36.8 - - + +
292B GLY 4.8 8.3 - - - +
295B ALA* 5.9 0.2 - - + -
276F PRO* 6.4 1.6 - - + -
277F SER 5.5 4.5 - - - +
278F ALA 6.5 0.2 - - - -
279F VAL* 5.2 10.1 - - - +
264G THR* 3.0 31.6 + - + +
265G ASN* 4.6 10.1 - - - +
267G LEU* 1.3 77.2 - - + +
269G ASP* 1.3 66.8 + - - +
271G ILE* 3.3 6.2 + - - +
272G THR* 2.5 42.4 + - - +
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Residues in contact with ASP 269 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
291C PRO 5.1 2.4 - - - +
292C GLY 4.2 14.6 - - - +
293C ARG* 5.5 0.7 - - + -
294C GLU* 3.3 30.8 + - - +
295C ALA* 3.6 23.6 + - - +
276D PRO* 5.1 6.6 - - - +
277D SER 5.5 0.2 - - - +
279D VAL 6.1 0.4 - - - +
277F SER 4.6 4.3 - - - +
278F ALA* 5.5 2.5 - - - -
265G ASN 4.1 11.9 - - - +
266G GLU* 3.3 11.0 + - - +
268G VAL* 1.3 87.6 - - - +
270G ILE* 1.3 61.7 + - - +
272G THR* 3.8 12.4 + - - -
273G GLY* 4.3 6.8 + - - -
----------------------------------------------------------
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Residues in contact with ILE 270 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
291A PRO* 3.8 21.5 - - + -
292A GLY 4.9 2.2 - - - +
294A GLU* 4.0 9.4 - - - -
295A ALA* 3.5 44.0 - - + +
275D ILE* 4.9 0.5 - - - +
276D PRO* 3.8 18.0 - - - +
277D SER 3.6 16.4 - - - +
278D ALA* 4.3 6.7 - - - -
279D VAL* 5.7 2.2 - - - +
266G GLU* 3.0 27.6 + - + +
267G LEU* 3.7 13.7 - - + +
268G VAL 3.3 0.2 - - - -
269G ASP* 1.3 79.4 - - - +
271G ILE* 1.3 65.1 + - + +
272G THR 3.3 0.4 + - - -
273G GLY* 3.5 9.9 + - - -
274G ALA* 3.6 9.4 + - - +
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Residues in contact with ILE 271 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
290A PRO* 6.1 2.2 - - + -
291A PRO* 4.1 25.8 - - + +
291B PRO* 5.8 5.8 - - + -
275E ILE* 4.1 30.5 - - + -
276E PRO* 3.9 28.9 - - + +
267G LEU* 3.0 29.2 + - + +
268G VAL* 3.8 5.6 - - - +
270G ILE* 1.3 77.2 - - + +
272G THR* 1.3 57.5 + - - +
274G ALA* 2.7 32.8 + - + +
275G SER* 3.4 12.8 + - - +
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Residues in contact with THR 272 (chain G).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
291C PRO* 4.2 14.7 - - + +
295C ALA* 5.6 0.7 - - + -
275F ILE* 4.1 11.5 - - + +
276F PRO* 3.6 42.3 + - + +
277F SER 5.5 0.5 + - - -
268G VAL* 2.5 30.8 + - - +
269G ASP* 3.8 16.7 + - - +
270G ILE 3.3 0.6 - - - -
271G ILE* 1.3 76.9 - - - +
273G GLY* 1.3 62.1 + - - +
274G ALA 3.4 0.2 + - - -
275G SER* 3.5 11.3 + - - -
276G SER* 3.7 13.0 + - - -
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il