Analysis of interatomic Contacts of Structural Units in PDB entry:
1AVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AVR entry

There is 1 chain in PDB entry 1AVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3ASP 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1AVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 29Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
46 62Right-handed alpha
Helix 4
4
A
64 73Right-handed alpha
Helix 5
5
A
74 86Right-handed alpha
Helix 6
6
A
87 101Right-handed alpha
Helix 7
7
A
106 117Right-handed alpha
Helix 8
8
A
118 134Right-handed alpha
Helix 9
9
A
136 145Right-handed alpha
Helix 10
10
A
146 158Right-handed alpha
Helix 11
11
A
168 185Right-handed alpha
Helix 12
12
A
190 201Right-handed alpha
Helix 13
13
A
202 218Right-handed alpha
Helix 14
14
A
220 225Right-handed 310
Helix 15
15
A
231 246Right-handed alpha
Helix 16
16
A
246 260Right-handed alpha
Helix 17
17
A
265 276Right-handed alpha
Helix 18
18
A
280 293Right-handed alpha
Helix 19
19
A
295 304Right-handed alpha
Helix 20
20
A
305 317Right-handed alpha
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There are no sheets in PDB entry 1AVR
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