Analysis of interatomic Contacts of Structural Units in PDB entry:
1B6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B6G entry

There are 3 chains in PDB entry 1B6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 149
A
 LEU 151ALA 232
A
 ILE 234GLU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 1B6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 12Right-handed 310
Helix 2
2
A
60 73Right-handed 310
Helix 3
3
A
94 96Right-handed 310
Helix 4
4
A
99 113Right-handed alpha
Helix 5
5
A
124 132Right-handed alpha
Helix 6
6
A
134 136Right-handed 310
Helix 7
7
A
138 140Right-handed 310
Helix 8
8
A
159 165Right-handed 310
Helix 9
9
A
172 180Right-handed alpha
Helix 10
10
A
187 194Right-handed alpha
Helix 11
11
A
200 207Right-handed alpha
Helix 12
12
A
213 215Right-handed 310
Helix 13
13
A
217 227Right-handed alpha
Helix 14
14
A
231 246Right-handed 310
Helix 15
15
A
265 274Right-handed alpha
Helix 16
16
A
291 308Right-handed 310
Back to top of page

There is 1 sheet ( A) in PDB entry 1B6G.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
35 42anti-parallel
Strand 3
A
76 80anti-parallel
Strand 4
A
49 52parallel
Strand 5
A
118 122parallel
Strand 6
A
141 147parallel
Strand 7
A
251 257parallel
Strand 8
A
282 284parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il