Analysis of interatomic Contacts of Structural Units in PDB entry:
1E3H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E3H entry

There is 1 chain in PDB entry 1E3H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ALA 632
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 1E3H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 17Right-handed 310
Helix 2
2
A
74 78Right-handed 310
Helix 3
3
A
92 110Right-handed alpha
Helix 4
4
A
133 148Right-handed alpha
Helix 5
5
A
173 178Right-handed alpha
Helix 6
6
A
208 215Right-handed alpha
Helix 7
7
A
221 251Right-handed alpha
Helix 8
8
A
264 276Right-handed alpha
Helix 9
9
A
275 283Right-handed alpha
Helix 10
10
A
287 306Right-handed alpha
Helix 11
11
A
313 335Right-handed alpha
Helix 12
12
A
384 386Right-handed 310
Helix 13
13
A
407 412Right-handed 310
Helix 14
14
A
421 436Right-handed alpha
Helix 15
15
A
437 439Right-handed 310
Helix 16
16
A
461 478Right-handed alpha
Helix 17
17
A
511 517Right-handed alpha
Helix 18
18
A
543 569Right-handed alpha
Helix 19
19
A
605 610Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 1E3H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 13first strand
Strand 2
A
19 26anti-parallel
Strand 3
A
35 41anti-parallel
Strand 4
A
48 53anti-parallel
Strand 5
A
118 124anti-parallel
Strand 6
A
66 72parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 159first strand
Strand 2
A
186 188anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 164first strand
Strand 2
A
167 170anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
530 535anti-parallel
Strand 3
A
521 525anti-parallel
Strand 4
A
486 488anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 355first strand
Strand 2
A
363 369anti-parallel
Strand 3
A
372 381anti-parallel
Strand 4
A
448 457anti-parallel
Strand 5
A
403 405parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 497first strand
Strand 2
A
500 505anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il