Analysis of interatomic Contacts of Structural Units in PDB entry:
1E8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E8X entry

There is 1 chain in PDB entry 1E8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 142LEU 1092
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 1E8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
144 159Right-handed alpha
Helix 2
2
A
171 180Right-handed alpha
Helix 3
3
A
180 191Right-handed alpha
Helix 4
4
A
192 198Right-handed alpha
Helix 5
5
A
208 213Right-handed alpha
Helix 6
6
A
214 216Right-handed 310
Helix 7
7
A
240 253Right-handed alpha
Helix 8
8
A
286 289Right-handed 310
Helix 9
9
A
290 299Right-handed alpha
Helix 10
10
A
312 316Right-handed 310
Helix 11
11
A
421 423Right-handed 310
Helix 12
12
A
498 503Right-handed 310
Helix 13
13
A
551 553Right-handed 310
Helix 14
14
A
554 559Right-handed alpha
Helix 15
15
A
568 578Right-handed alpha
Helix 16
16
A
578 584Right-handed alpha
Helix 17
17
A
585 587Right-handed 310
Helix 18
18
A
588 594Right-handed alpha
Helix 19
19
A
600 611Right-handed alpha
Helix 20
20
A
614 620Right-handed alpha
Helix 21
21
A
623 630Right-handed alpha
Helix 22
22
A
637 649Right-handed alpha
Helix 23
23
A
652 660Right-handed alpha
Helix 24
24
A
659 667Right-handed alpha
Helix 25
25
A
668 670Right-handed 310
Helix 26
26
A
675 688Right-handed alpha
Helix 27
27
A
688 706Right-handed alpha
Helix 28
28
A
706 722Right-handed alpha
Helix 29
29
A
725 752Right-handed alpha
Helix 30
30
A
760 776Right-handed alpha
Helix 31
31
A
798 801Right-handed 310
Helix 32
32
A
837 858Right-handed alpha
Helix 33
33
A
888 896Right-handed alpha
Helix 34
34
A
905 915Right-handed alpha
Helix 35
35
A
917 942Right-handed alpha
Helix 36
36
A
948 950Right-handed 310
Helix 37
37
A
988 995Right-handed alpha
Helix 38
38
A
1004 1022Right-handed alpha
Helix 39
39
A
1023 1039Right-handed alpha
Helix 40
40
A
1048 1055Right-handed alpha
Helix 41
41
A
1060 1079Right-handed alpha
Helix 42
42
A
1080 1092Right-handed alpha
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There are 7 sheets in PDB entry 1E8X. Click on sheet of interest to get list of strands forming it: A, B, C, C1, D, D1, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 239first strand
Strand 2
A
220 225anti-parallel
Strand 3
A
305 308parallel
Strand 4
A
271 274anti-parallel
Strand 5
A
280 281anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 419first strand
Strand 2
A
360 369anti-parallel
Strand 3
A
515 520anti-parallel
Strand 4
A
478 483anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 398first strand
Strand 2
A
380 389anti-parallel
Strand 3
A
402 403anti-parallel
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There are 5 strands in C1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 398first strand
Strand 2
A
380 389anti-parallel
Strand 3
A
428 434anti-parallel
Strand 4
A
460 467anti-parallel
Strand 5
A
485 486anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
783 785first strand
Strand 2
A
788 796anti-parallel
Strand 3
A
811 817anti-parallel
Strand 4
A
802 803anti-parallel
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There are 6 strands in D1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
783 785first strand
Strand 2
A
788 796anti-parallel
Strand 3
A
811 817anti-parallel
Strand 4
A
828 834anti-parallel
Strand 5
A
876 880anti-parallel
Strand 6
A
869 873anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
885 887first strand
Strand 2
A
952 955anti-parallel
Strand 3
A
960 962anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il