Analysis of interatomic Contacts of Structural Units in PDB entry:
1E8Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E8Y entry

There is 1 chain in PDB entry 1E8Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 143LEU 1092
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 1E8Y. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
144 159Right-handed alpha
Helix 2
2
A
171 180Right-handed alpha
Helix 3
3
A
180 191Right-handed alpha
Helix 4
4
A
192 199Right-handed alpha
Helix 5
5
A
208 213Right-handed alpha
Helix 6
6
A
240 244Right-handed 310
Helix 7
7
A
245 253Right-handed alpha
Helix 8
8
A
286 289Right-handed 310
Helix 9
9
A
290 299Right-handed alpha
Helix 10
10
A
312 317Right-handed 310
Helix 11
11
A
421 423Right-handed 310
Helix 12
12
A
498 503Right-handed 310
Helix 13
13
A
548 561Right-handed alpha
Helix 14
14
A
568 578Right-handed alpha
Helix 15
15
A
578 583Right-handed alpha
Helix 16
16
A
584 587Right-handed 310
Helix 17
17
A
588 594Right-handed alpha
Helix 18
18
A
600 613Right-handed alpha
Helix 19
19
A
614 619Right-handed alpha
Helix 20
20
A
623 631Right-handed alpha
Helix 21
21
A
637 649Right-handed alpha
Helix 22
22
A
652 660Right-handed alpha
Helix 23
23
A
659 667Right-handed alpha
Helix 24
24
A
668 670Right-handed 310
Helix 25
25
A
675 688Right-handed alpha
Helix 26
26
A
688 706Right-handed alpha
Helix 27
27
A
709 722Right-handed alpha
Helix 28
28
A
725 752Right-handed alpha
Helix 29
29
A
760 775Right-handed alpha
Helix 30
30
A
798 801Right-handed 310
Helix 31
31
A
837 857Right-handed alpha
Helix 32
32
A
888 896Right-handed alpha
Helix 33
33
A
905 915Right-handed alpha
Helix 34
34
A
917 942Right-handed alpha
Helix 35
35
A
948 950Right-handed 310
Helix 36
36
A
988 995Right-handed alpha
Helix 37
37
A
1003 1022Right-handed alpha
Helix 38
38
A
1023 1039Right-handed alpha
Helix 39
39
A
1045 1055Right-handed alpha
Helix 40
40
A
1060 1079Right-handed alpha
Helix 41
41
A
1080 1086Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 1E8Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 225first strand
Strand 2
A
303 308parallel
Strand 3
A
271 274anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
412 415first strand
Strand 2
A
362 369anti-parallel
Strand 3
A
515 520anti-parallel
Strand 4
A
478 483anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
367 369first strand
Strand 2
A
407 409anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
462 467first strand
Strand 2
A
428 434anti-parallel
Strand 3
A
382 388anti-parallel
Strand 4
A
393 398anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
811 815first strand
Strand 2
A
828 834anti-parallel
Strand 3
A
876 880anti-parallel
Strand 4
A
869 873anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
885 887first strand
Strand 2
A
952 955anti-parallel
Strand 3
A
960 962anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
783 785first strand
Strand 2
A
788 793anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il