Analysis of interatomic Contacts of Structural Units in PDB entry:
1FBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FBN entry

There is 1 chain in PDB entry 1FBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MSE 1LYS 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1FBN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
58 64Right-handed alpha
Helix 2
2
A
87 95Right-handed alpha
Helix 3
3
A
108 117Right-handed 310
Helix 4
4
A
134 137Right-handed 310
Helix 5
5
A
156 167Right-handed alpha
Helix 6
6
A
180 182Right-handed 310
Helix 7
7
A
189 203Right-handed alpha
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There are 4 sheets in PDB entry 1FBN. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
5 9first strand
Strand 2
A
13 17anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
26 28first strand
Strand 2
A
47 51anti-parallel
Strand 3
A
41 44anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
146 149first strand
Strand 2
A
77 81parallel
Strand 3
A
100 105parallel
Strand 4
A
124 128parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
205 209first strand
Strand 2
A
224 227anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il