Analysis of interatomic Contacts of Structural Units in PDB entry:
1FMC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FMC entry

There are 2 chains in PDB entry 1FMC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 255
B
 MET 1ASN 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1FMC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
BA
A
22 32Right-handed alpha
Helix 2
CA
A
45 57Right-handed alpha
Helix 3
A
A
72 86Right-handed alpha
Helix 4
EA
A
108 136Right-handed alpha
Helix 5
FA
A
157 178Right-handed alpha
Helix 6
1A
A
195 198Right-handed alpha
Helix 7
2A
A
203 211Right-handed alpha
Helix 8
GA
A
221 232Right-handed alpha
Helix 9
BB
B
22 33Right-handed alpha
Helix 10
CB
B
45 57Right-handed alpha
Helix 11
DB
B
72 86Right-handed alpha
Helix 12
EB
B
108 135Right-handed alpha
Helix 13
FB
B
157 178Right-handed alpha
Helix 14
1B
B
195 198Right-handed alpha
Helix 15
2B
B
203 211Right-handed alpha
Helix 16
GB
B
221 232Right-handed alpha
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There are 2 sheets in PDB entry 1FMC. Click on sheet of interest to get list of strands forming it: S1A, S1B,

There are 7 strands in S1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
37 42parallel
Strand 3
A
13 16parallel
Strand 4
A
91 94parallel
Strand 5
A
139 144parallel
Strand 6
A
182 189parallel
Strand 7
A
243 246parallel
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There are 7 strands in S1B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
37 42parallel
Strand 3
B
13 16parallel
Strand 4
B
91 94parallel
Strand 5
B
139 144parallel
Strand 6
B
182 189parallel
Strand 7
B
243 246parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il