Analysis of interatomic Contacts of Structural Units in PDB entry:
1G24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G24 entry

There are 4 chains in PDB entry 1G24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 41LYS 251
B
 ALA 1041LYS 1251
C
 ALA 2041LYS 2251
D
 ALA 3041LYS 3251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 1G24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 67Right-handed alpha
Helix 2
2
A
69 83Right-handed alpha
Helix 3
3
A
82 93Right-handed alpha
Helix 4
4
A
101 115Right-handed alpha
Helix 5
5
A
131 136Right-handed 310
Helix 6
6
A
151 163Right-handed alpha
Helix 7
7
B
1051 1067Right-handed alpha
Helix 8
8
B
1069 1083Right-handed alpha
Helix 9
9
B
1082 1093Right-handed alpha
Helix 10
10
B
1101 1115Right-handed alpha
Helix 11
11
B
1131 1136Right-handed 310
Helix 12
12
B
1136 1140Right-handed 310
Helix 13
13
B
1151 1163Right-handed alpha
Helix 14
14
C
2051 2067Right-handed alpha
Helix 15
15
C
2069 2083Right-handed alpha
Helix 16
16
C
2082 2093Right-handed alpha
Helix 17
17
C
2101 2115Right-handed alpha
Helix 18
18
C
2131 2136Right-handed 310
Helix 19
19
C
2151 2163Right-handed alpha
Helix 20
20
D
3051 3064Right-handed alpha
Helix 21
21
D
3069 3083Right-handed alpha
Helix 22
22
D
3082 3093Right-handed alpha
Helix 23
23
D
3101 3115Right-handed alpha
Helix 24
24
D
3131 3136Right-handed 310
Helix 25
25
D
3152 3163Right-handed alpha
Helix 26
26
D
3180 3184Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 1G24. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 130first strand
Strand 2
A
188 194anti-parallel
Strand 3
A
237 246parallel
Strand 4
A
221 230anti-parallel
Strand 5
A
166 169anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 176first strand
Strand 2
A
214 217anti-parallel
Strand 3
A
201 202anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1124 1130first strand
Strand 2
B
1188 1194anti-parallel
Strand 3
B
1237 1246parallel
Strand 4
B
1221 1230anti-parallel
Strand 5
B
1166 1169anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1173 1176first strand
Strand 2
B
1214 1217anti-parallel
Strand 3
B
1201 1202anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2124 2130first strand
Strand 2
C
2188 2194anti-parallel
Strand 3
C
2237 2246parallel
Strand 4
C
2221 2230anti-parallel
Strand 5
C
2166 2169anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2173 2176first strand
Strand 2
C
2214 2217anti-parallel
Strand 3
C
2201 2202anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3124 3130first strand
Strand 2
D
3188 3194anti-parallel
Strand 3
D
3237 3246parallel
Strand 4
D
3221 3230anti-parallel
Strand 5
D
3166 3169anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3173 3176first strand
Strand 2
D
3214 3217anti-parallel
Strand 3
D
3201 3202anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il