Analysis of interatomic Contacts of Structural Units in PDB entry:
1G6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G6W entry

There are 4 chains in PDB entry 1G6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 100GLY 353
B
 VAL 97GLY 353
C
 SER 100GLU 354
D
 HIS 96GLU 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 1G6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
102 108Right-handed 310
Helix 2
2
A
122 135Right-handed alpha
Helix 3
3
A
145 149Right-handed 310
Helix 4
4
A
153 158Right-handed alpha
Helix 5
5
A
172 174Right-handed 310
Helix 6
6
A
180 197Right-handed alpha
Helix 7
7
A
205 223Right-handed alpha
Helix 8
8
A
223 236Right-handed alpha
Helix 9
9
A
241 272Right-handed alpha
Helix 10
10
A
307 312Right-handed alpha
Helix 11
11
A
313 318Right-handed alpha
Helix 12
12
A
319 324Right-handed 310
Helix 13
13
A
326 331Right-handed alpha
Helix 14
14
A
331 343Right-handed alpha
Helix 15
15
A
344 351Right-handed alpha
Helix 16
16
B
99 106Right-handed alpha
Helix 17
17
B
122 135Right-handed alpha
Helix 18
18
B
145 149Right-handed 310
Helix 19
19
B
149 152Right-handed 310
Helix 20
20
B
153 158Right-handed alpha
Helix 21
21
B
172 174Right-handed 310
Helix 22
22
B
180 197Right-handed alpha
Helix 23
23
B
205 222Right-handed alpha
Helix 24
24
B
223 236Right-handed alpha
Helix 25
25
B
241 272Right-handed alpha
Helix 26
26
B
292 296Right-handed 310
Helix 27
27
B
307 312Right-handed alpha
Helix 28
28
B
313 318Right-handed alpha
Helix 29
29
B
319 324Right-handed 310
Helix 30
30
B
326 331Right-handed alpha
Helix 31
31
B
331 343Right-handed alpha
Helix 32
32
B
344 351Right-handed alpha
Helix 33
33
C
101 106Right-handed alpha
Helix 34
34
C
122 135Right-handed alpha
Helix 35
35
C
145 149Right-handed 310
Helix 36
36
C
149 152Right-handed 310
Helix 37
37
C
153 160Right-handed alpha
Helix 38
38
C
172 174Right-handed 310
Helix 39
39
C
180 197Right-handed alpha
Helix 40
40
C
205 223Right-handed alpha
Helix 41
41
C
223 236Right-handed alpha
Helix 42
42
C
241 275Right-handed alpha
Helix 43
43
C
278 285Right-handed alpha
Helix 44
44
C
288 292Right-handed 310
Helix 45
45
C
307 318Right-handed alpha
Helix 46
46
C
319 324Right-handed 310
Helix 47
47
C
326 331Right-handed alpha
Helix 48
48
C
331 343Right-handed alpha
Helix 49
49
C
344 353Right-handed alpha
Helix 50
50
D
99 108Right-handed alpha
Helix 51
51
D
122 135Right-handed alpha
Helix 52
52
D
149 152Right-handed 310
Helix 53
53
D
153 158Right-handed alpha
Helix 54
54
D
172 174Right-handed 310
Helix 55
55
D
180 197Right-handed alpha
Helix 56
56
D
205 223Right-handed alpha
Helix 57
57
D
223 236Right-handed alpha
Helix 58
58
D
241 274Right-handed alpha
Helix 59
59
D
275 277Right-handed 310
Helix 60
60
D
278 285Right-handed alpha
Helix 61
61
D
288 292Right-handed 310
Helix 62
62
D
307 318Right-handed alpha
Helix 63
63
D
319 324Right-handed 310
Helix 64
64
D
326 331Right-handed alpha
Helix 65
65
D
331 343Right-handed alpha
Helix 66
66
D
344 353Right-handed alpha
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There are 4 sheets in PDB entry 1G6W. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 143first strand
Strand 2
A
114 118parallel
Strand 3
A
167 170anti-parallel
Strand 4
A
176 178anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 143first strand
Strand 2
B
114 118parallel
Strand 3
B
167 170anti-parallel
Strand 4
B
176 178anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 143first strand
Strand 2
C
114 118parallel
Strand 3
C
167 170anti-parallel
Strand 4
C
176 179anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
139 143first strand
Strand 2
D
114 118parallel
Strand 3
D
167 170anti-parallel
Strand 4
D
176 178anti-parallel
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