Analysis of interatomic Contacts of Structural Units in PDB entry:
1GWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GWX entry

There are 2 chains in PDB entry 1GWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 207TYR 477
B
GLN 207TYR 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 1GWX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
214 223Right-handed alpha
Helix 2
2
A
230 236Right-handed alpha
Helix 3
3
A
252 261Right-handed alpha
Helix 4
4
A
277 302Right-handed alpha
Helix 5
5
A
304 308Right-handed alpha
Helix 6
6
A
311 320Right-handed alpha
Helix 7
7
A
322 333Right-handed alpha
Helix 8
8
A
350 355Right-handed alpha
Helix 9
9
A
358 362Right-handed alpha
Helix 10
10
A
365 376Right-handed alpha
Helix 11
11
A
381 392Right-handed alpha
Helix 12
12
A
403 424Right-handed alpha
Helix 13
13
A
431 459Right-handed alpha
Helix 14
14
A
467 474Right-handed alpha
Helix 15
15
B
210 223Right-handed alpha
Helix 16
16
B
230 236Right-handed alpha
Helix 17
17
B
252 261Right-handed alpha
Helix 18
18
B
277 302Right-handed alpha
Helix 19
19
B
311 333Right-handed alpha
Helix 20
20
B
350 354Right-handed alpha
Helix 21
21
B
365 375Right-handed alpha
Helix 22
22
B
381 392Right-handed alpha
Helix 23
23
B
403 423Right-handed alpha
Helix 24
24
B
435 459Right-handed alpha
Helix 25
25
B
467 472Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1GWX. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
247 249first strand
Strand 2
A
346 349parallel
Strand 3
A
338 341anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
339 341first strand
Strand 2
B
346 348anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il