Analysis of interatomic Contacts of Structural Units in PDB entry:
1GYU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GYU entry

There is 1 chain in PDB entry 1GYU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 703GLN 822
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 2 helices in PDB entry 1GYU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
771 775Right-handed 310
Helix 2
2
A
817 821Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 1GYU. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
707 712first strand
Strand 2
A
715 723anti-parallel
Strand 3
A
730 739anti-parallel
Strand 4
A
778 785anti-parallel
Strand 5
A
759 762anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
746 753first strand
Strand 2
A
794 802anti-parallel
Strand 3
A
805 813anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il