Analysis of interatomic Contacts of Structural Units in PDB entry:
1H1B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H1B entry

There are 2 chains in PDB entry 1H1B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 16GLN 243
B
 ILE 16GLN 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 1H1B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 61Right-handed alpha
Helix 2
2
A
62 63Right-handed 310
Helix 3
3
A
234 243Right-handed alpha
Helix 4
4
B
55 60Right-handed alpha
Helix 5
5
B
62 64Right-handed 310
Helix 6
6
B
234 243Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1H1B. Click on sheet of interest to get list of strands forming it: AA, AB, BA,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
156 163anti-parallel
Strand 3
A
181 184anti-parallel
Strand 4
A
226 230anti-parallel
Strand 5
A
208 215anti-parallel
Strand 6
A
198 201anti-parallel
Strand 7
A
135 140anti-parallel
Strand 8
A
156 163parallel
Strand 9
A
20 21anti-parallel
Back to list of sheets
Back to top of page

There are 15 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
39 48anti-parallel
Strand 3
A
51 54anti-parallel
Strand 4
A
104 108anti-parallel
Strand 5
A
85 94anti-parallel
Strand 6
B
81 94anti-parallel
Strand 7
B
104 108anti-parallel
Strand 8
B
51 54anti-parallel
Strand 9
B
39 48anti-parallel
Strand 10
B
30 35anti-parallel
Strand 11
B
65 68anti-parallel
Strand 12
B
81 94parallel
Strand 13
A
85 94anti-parallel
Strand 14
A
104 108anti-parallel
Strand 15
A
30 35first strand
Back to list of sheets
Back to top of page

There are 16 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 21first strand
Strand 2
B
156 164anti-parallel
Strand 3
B
181 184anti-parallel
Strand 4
B
226 230anti-parallel
Strand 5
B
135 140first strand
Strand 6
B
156 164parallel
Strand 7
B
156 164first strand
Strand 8
B
20 21anti-parallel
Strand 9
B
181 184first strand
Strand 10
B
156 164anti-parallel
Strand 11
B
198 201first strand
Strand 12
B
135 140anti-parallel
Strand 13
B
208 215first strand
Strand 14
B
198 201anti-parallel
Strand 15
B
226 230first strand
Strand 16
B
181 184anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il