Analysis of interatomic Contacts of Structural Units in PDB entry:
1H3F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H3F entry

There are 2 chains in PDB entry 1H3F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ASP 432
B
 GLY 5ASP 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 1H3F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 17Right-handed alpha
Helix 2
2
A
24 34Right-handed alpha
Helix 3
3
A
52 68Right-handed alpha
Helix 4
4
A
101 113Right-handed alpha
Helix 5
5
A
128 133Right-handed alpha
Helix 6
6
A
136 145Right-handed alpha
Helix 7
7
A
148 153Right-handed alpha
Helix 8
8
A
155 164Right-handed alpha
Helix 9
9
A
170 173Right-handed 310
Helix 10
10
A
174 187Right-handed alpha
Helix 11
11
A
197 211Right-handed alpha
Helix 12
12
A
234 238Right-handed 310
Helix 13
13
A
246 256Right-handed alpha
Helix 14
14
A
258 260Right-handed 310
Helix 15
15
A
261 270Right-handed alpha
Helix 16
16
A
273 284Right-handed alpha
Helix 17
17
A
284 302Right-handed alpha
Helix 18
18
A
310 317Right-handed alpha
Helix 19
19
A
320 324Right-handed 310
Helix 20
20
A
332 346Right-handed alpha
Helix 21
21
A
360 364Right-handed 310
Helix 22
22
A
371 378Right-handed alpha
Helix 23
23
A
383 393Right-handed alpha
Helix 24
24
B
7 17Right-handed alpha
Helix 25
25
B
24 33Right-handed alpha
Helix 26
26
B
52 68Right-handed alpha
Helix 27
27
B
77 82Right-handed alpha
Helix 28
28
B
97 113Right-handed alpha
Helix 29
29
B
128 133Right-handed alpha
Helix 30
30
B
136 145Right-handed alpha
Helix 31
31
B
148 153Right-handed alpha
Helix 32
32
B
155 165Right-handed alpha
Helix 33
33
B
170 173Right-handed 310
Helix 34
34
B
174 186Right-handed alpha
Helix 35
35
B
197 211Right-handed alpha
Helix 36
36
B
234 238Right-handed 310
Helix 37
37
B
246 256Right-handed alpha
Helix 38
38
B
258 260Right-handed 310
Helix 39
39
B
261 270Right-handed alpha
Helix 40
40
B
273 282Right-handed alpha
Helix 41
41
B
284 302Right-handed alpha
Helix 42
42
B
310 316Right-handed alpha
Helix 43
43
B
320 324Right-handed 310
Helix 44
44
B
332 343Right-handed alpha
Helix 45
45
B
360 364Right-handed 310
Helix 46
46
B
371 378Right-handed alpha
Helix 47
47
B
383 393Right-handed alpha
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There are 6 sheets in PDB entry 1H3F. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
217 221anti-parallel
Strand 3
A
190 194parallel
Strand 4
A
39 44parallel
Strand 5
A
71 76parallel
Strand 6
A
123 127parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 359first strand
Strand 2
A
424 430parallel
Strand 3
A
416 420anti-parallel
Strand 4
A
396 398anti-parallel
Strand 5
A
401 402anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 370first strand
Strand 2
A
409 411anti-parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 23first strand
Strand 2
B
217 221anti-parallel
Strand 3
B
190 194parallel
Strand 4
B
39 44parallel
Strand 5
B
71 76parallel
Strand 6
B
123 127parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 358first strand
Strand 2
B
424 429parallel
Strand 3
B
416 420anti-parallel
Strand 4
B
396 398anti-parallel
Strand 5
B
401 402anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 370first strand
Strand 2
B
409 411anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il