Analysis of interatomic Contacts of Structural Units in PDB entry:
1H6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H6T entry

There is 1 chain in PDB entry 1H6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 31GLU 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1H6T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
33 37Right-handed 310
Helix 2
2
A
44 48Right-handed alpha
Helix 3
3
A
50 61Right-handed alpha
Helix 4
4
A
71 77Right-handed alpha
Helix 5
5
A
93 97Right-handed 310
Helix 6
6
A
113 117Right-handed 310
Helix 7
7
A
134 139Right-handed 310
Helix 8
8
A
157 163Right-handed 310
Helix 9
9
A
179 185Right-handed 310
Helix 10
10
A
201 205Right-handed 310
Helix 11
11
A
223 227Right-handed 310
Helix 12
12
A
274 276Right-handed 310
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There are 4 sheets in PDB entry 1H6T. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
42 43first strand
Strand 2
A
69 70anti-parallel
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There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
80 82first strand
Strand 2
A
102 104parallel
Strand 3
A
124 126parallel
Strand 4
A
146 148parallel
Strand 5
A
168 170parallel
Strand 6
A
190 192parallel
Strand 7
A
212 214parallel
Strand 8
A
234 243parallel
Strand 9
A
307 320parallel
Strand 10
A
247 248parallel
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There are 11 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
80 82first strand
Strand 2
A
102 104parallel
Strand 3
A
124 126parallel
Strand 4
A
146 148parallel
Strand 5
A
168 170parallel
Strand 6
A
190 192parallel
Strand 7
A
212 214parallel
Strand 8
A
234 243parallel
Strand 9
A
307 320parallel
Strand 10
A
293 304anti-parallel
Strand 11
A
269 272anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
252 256first strand
Strand 2
A
282 286anti-parallel
Strand 3
A
277 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il