Analysis of interatomic Contacts of Structural Units in PDB entry:
1H8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H8X entry

There are 2 chains in PDB entry 1H8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 101ASP 226
B
 LYS 101ASP 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1H8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
103 113Right-handed alpha
Helix 2
2
A
124 133Right-handed alpha
Helix 3
3
A
150 157Right-handed alpha
Helix 4
4
A
158 160Right-handed 310
Helix 5
5
B
103 113Right-handed alpha
Helix 6
6
B
124 133Right-handed alpha
Helix 7
7
B
150 156Right-handed alpha
Helix 8
8
B
157 160Right-handed 310
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There are 4 sheets in PDB entry 1H8X. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
179 186anti-parallel
Strand 3
A
197 211anti-parallel
Strand 4
A
171 174anti-parallel
Strand 5
A
161 163anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 147first strand
Strand 2
A
179 186anti-parallel
Strand 3
A
197 211anti-parallel
Strand 4
A
216 224anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 147first strand
Strand 2
B
179 186anti-parallel
Strand 3
B
197 204anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 163first strand
Strand 2
B
172 174anti-parallel
Strand 3
B
206 211anti-parallel
Strand 4
B
216 223anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il