Analysis of interatomic Contacts of Structural Units in PDB entry:
1HLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HLU entry

There are 3 chains in PDB entry 1HLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLU 72
A
 GLY 74PHE 375
P
 ALA 1TYR 139
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 1HLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
HAA
A
56 60Right-handed alpha
Helix 2
HAB
A
79 91Right-handed alpha
Helix 3
HTA
A
97 101Right-handed 310
Helix 4
HAC
A
112 126Right-handed alpha
Helix 5
HAD
A
136 144Right-handed alpha
Helix 6
HTB
A
171 174Right-handed 310
Helix 7
HAE
A
181 195Right-handed alpha
Helix 8
HAF
A
204 216Right-handed alpha
Helix 9
HAG
A
222 232Right-handed alpha
Helix 10
HAH
A
253 262Right-handed alpha
Helix 11
HTC
A
264 267Right-handed 310
Helix 12
HAI
A
273 283Right-handed alpha
Helix 13
HAJ
A
290 295Right-handed alpha
Helix 14
HAK
A
308 318Right-handed alpha
Helix 15
HAL
A
337 347Right-handed alpha
Helix 16
HTE
A
349 355Right-handed 310
Helix 17
HAM
A
358 365Right-handed alpha
Helix 18
HAN
A
367 374Right-handed alpha
Helix 19
HTD
A
332 337Right-handed 310
Helix 20
HPA
P
2 11Right-handed alpha
Helix 21
HTF
P
38 41Right-handed alpha
Helix 22
HPB
P
43 50Right-handed alpha
Helix 23
HPC
P
56 61Right-handed alpha
Helix 24
HPD
P
120 136Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 1HLU. Click on sheet of interest to get list of strands forming it: SA1, SA2, SA3, SA4, SA5, SP1,

There are 6 strands in SA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
7 12anti-parallel
Strand 4
A
102 107parallel
Strand 5
A
131 135parallel
Strand 6
A
356 358anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in SA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
33 37anti-parallel
Strand 3
A
66 69anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in SA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
75 76anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in SA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
159 166anti-parallel
Strand 3
A
150 155anti-parallel
Strand 4
A
296 301parallel
Strand 5
A
326 331parallel
Back to list of sheets
Back to top of page

There are 2 strands in SA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 242first strand
Strand 2
A
246 250anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in SP1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
28 34first strand
Strand 2
P
18 23anti-parallel
Strand 3
P
108 115anti-parallel
Strand 4
P
97 104anti-parallel
Strand 5
P
84 91anti-parallel
Strand 6
P
68 75anti-parallel
Strand 7
P
63 65anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il