Analysis of interatomic Contacts of Structural Units in PDB entry:
1HMU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HMU entry

There is 1 chain in PDB entry 1HMU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26LEU 699
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1HMU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 40Right-handed alpha
Helix 2
2
A
45 57Right-handed alpha
Helix 3
3
A
78 94Right-handed alpha
Helix 4
4
A
102 120Right-handed alpha
Helix 5
5
A
125 131Right-handed alpha
Helix 6
6
A
131 144Right-handed alpha
Helix 7
7
A
145 147Right-handed 310
Helix 8
8
A
152 163Right-handed alpha
Helix 9
9
A
167 171Right-handed 310
Helix 10
10
A
172 190Right-handed alpha
Helix 11
11
A
192 205Right-handed alpha
Helix 12
12
A
233 250Right-handed alpha
Helix 13
13
A
257 271Right-handed alpha
Helix 14
14
A
272 274Right-handed 310
Helix 15
15
A
283 292Right-handed 310
Helix 16
16
A
298 300Right-handed 310
Helix 17
17
A
301 312Right-handed alpha
Helix 18
18
A
315 327Right-handed alpha
Helix 19
19
A
379 383Right-handed 310
Helix 20
20
A
400 404Right-handed 310
Helix 21
21
A
405 409Right-handed 310
Helix 22
22
A
546 549Right-handed 310
Helix 23
24
A
595 598Right-handed 310
Helix 24
25
A
689 693Right-handed 310
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There are 8 sheets in PDB entry 1HMU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
222 223anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 277first strand
Strand 2
A
280 281anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 343first strand
Strand 2
A
348 353anti-parallel
Strand 3
A
356 361anti-parallel
Strand 4
A
387 391anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
483 492anti-parallel
Strand 3
A
558 571anti-parallel
Strand 4
A
533 538anti-parallel
Strand 5
A
509 514anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
483 492anti-parallel
Strand 3
A
558 571anti-parallel
Strand 4
A
541 544anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 440first strand
Strand 2
A
445 453anti-parallel
Strand 3
A
456 464anti-parallel
Strand 4
A
469 478anti-parallel
Strand 5
A
576 584anti-parallel
Strand 6
A
525 528anti-parallel
Strand 7
A
519 522anti-parallel
Strand 8
A
497 499anti-parallel
Strand 9
A
502 504anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 605first strand
Strand 2
A
609 614anti-parallel
Strand 3
A
619 624anti-parallel
Strand 4
A
643 648anti-parallel
Strand 5
A
655 659anti-parallel
Strand 6
A
697 698anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
628 632first strand
Strand 2
A
635 639anti-parallel
Strand 3
A
667 674anti-parallel
Strand 4
A
680 686anti-parallel
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