Analysis of interatomic Contacts of Structural Units in PDB entry:
1HSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HSJ entry

There are 2 chains in PDB entry 1HSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1ASN 487
B
 LYS 1ASN 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 1HSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 32Right-handed alpha
Helix 2
2
A
42 53Right-handed alpha
Helix 3
3
A
66 74Right-handed alpha
Helix 4
4
A
82 87Right-handed alpha
Helix 5
5
A
90 97Right-handed alpha
Helix 6
6
A
120 122Right-handed 310
Helix 7
7
A
132 140Right-handed alpha
Helix 8
8
A
153 164Right-handed alpha
Helix 9
9
A
185 201Right-handed alpha
Helix 10
10
A
209 219Right-handed alpha
Helix 11
11
A
228 230Right-handed 310
Helix 12
12
A
231 238Right-handed alpha
Helix 13
13
A
272 283Right-handed alpha
Helix 14
14
A
286 297Right-handed alpha
Helix 15
15
A
304 312Right-handed alpha
Helix 16
16
A
314 327Right-handed alpha
Helix 17
17
A
335 352Right-handed alpha
Helix 18
18
A
356 369Right-handed alpha
Helix 19
19
A
378 397Right-handed alpha
Helix 20
20
A
403 415Right-handed alpha
Helix 21
21
A
423 429Right-handed alpha
Helix 22
22
A
433 446Right-handed alpha
Helix 23
23
A
469 482Right-handed alpha
Helix 24
24
A
483 485Right-handed 310
Helix 25
25
B
16 32Right-handed alpha
Helix 26
26
B
42 53Right-handed alpha
Helix 27
27
B
64 74Right-handed alpha
Helix 28
28
B
82 87Right-handed alpha
Helix 29
29
B
90 97Right-handed alpha
Helix 30
30
B
120 122Right-handed 310
Helix 31
31
B
132 140Right-handed alpha
Helix 32
32
B
153 164Right-handed alpha
Helix 33
33
B
185 201Right-handed alpha
Helix 34
34
B
209 219Right-handed alpha
Helix 35
35
B
228 230Right-handed 310
Helix 36
36
B
231 238Right-handed alpha
Helix 37
37
B
272 283Right-handed alpha
Helix 38
38
B
286 297Right-handed alpha
Helix 39
39
B
304 312Right-handed alpha
Helix 40
40
B
314 327Right-handed alpha
Helix 41
41
B
334 352Right-handed alpha
Helix 42
42
B
356 370Right-handed alpha
Helix 43
43
B
378 397Right-handed alpha
Helix 44
44
B
403 415Right-handed alpha
Helix 45
45
B
423 429Right-handed alpha
Helix 46
46
B
433 446Right-handed alpha
Helix 47
47
B
469 482Right-handed alpha
Helix 48
48
B
482 487Right-handed alpha
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There are 10 sheets in PDB entry 1HSJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
7 10parallel
Strand 3
A
59 63parallel
Strand 4
A
260 266anti-parallel
Strand 5
A
105 111anti-parallel
Strand 6
A
301 302anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
102 103anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
222 227parallel
Strand 3
A
114 118anti-parallel
Strand 4
A
242 245anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 171first strand
Strand 2
A
176 181anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 422first strand
Strand 2
A
463 465anti-parallel
Strand 3
A
453 454anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 38first strand
Strand 2
B
7 10parallel
Strand 3
B
59 63parallel
Strand 4
B
260 266anti-parallel
Strand 5
B
105 111anti-parallel
Strand 6
B
301 302anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 99first strand
Strand 2
B
102 103anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 147first strand
Strand 2
B
222 227parallel
Strand 3
B
114 118anti-parallel
Strand 4
B
242 245anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
176 181anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
420 422first strand
Strand 2
B
463 465anti-parallel
Strand 3
B
453 454anti-parallel
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