Analysis of interatomic Contacts of Structural Units in PDB entry:
1HYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HYG entry

There are 2 chains in PDB entry 1HYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 313
B
 MET 1LEU 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1HYG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
34 36Right-handed 310
Helix 3
3
A
37 53Right-handed alpha
Helix 4
4
A
68 73Right-handed 310
Helix 5
5
A
91 114Right-handed alpha
Helix 6
6
A
124 137Right-handed alpha
Helix 7
7
A
148 164Right-handed alpha
Helix 8
8
A
166 168Right-handed 310
Helix 9
9
A
186 188Right-handed 310
Helix 10
10
A
197 205Right-handed 310
Helix 11
11
A
206 216Right-handed alpha
Helix 12
12
A
218 223Right-handed alpha
Helix 13
13
A
229 245Right-handed alpha
Helix 14
14
A
289 312Right-handed alpha
Helix 15
15
B
10 23Right-handed alpha
Helix 16
16
B
34 36Right-handed 310
Helix 17
17
B
37 52Right-handed alpha
Helix 18
18
B
68 73Right-handed 310
Helix 19
19
B
91 114Right-handed alpha
Helix 20
20
B
124 137Right-handed alpha
Helix 21
21
B
148 164Right-handed alpha
Helix 22
22
B
166 168Right-handed 310
Helix 23
23
B
186 188Right-handed 310
Helix 24
24
B
197 205Right-handed 310
Helix 25
25
B
206 216Right-handed alpha
Helix 26
26
B
218 223Right-handed alpha
Helix 27
27
B
229 245Right-handed alpha
Helix 28
28
B
289 312Right-handed alpha
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There are 9 sheets in PDB entry 1HYG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
28 33parallel
Strand 3
A
2 6parallel
Strand 4
A
77 80parallel
Strand 5
A
117 120parallel
Strand 6
A
143 145parallel
Strand 7
A
252 257anti-parallel
Strand 8
A
267 272anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
190 191anti-parallel
Strand 3
A
194 195anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
183 184anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
279 280anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 65first strand
Strand 2
B
28 33parallel
Strand 3
B
2 6parallel
Strand 4
B
77 80parallel
Strand 5
B
117 120parallel
Strand 6
B
143 145parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
190 191anti-parallel
Strand 3
B
194 195anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 175first strand
Strand 2
B
183 184anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 257first strand
Strand 2
B
267 272anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 276first strand
Strand 2
B
279 280anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il