Analysis of interatomic Contacts of Structural Units in PDB entry:
1I60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1I60 entry

There is 1 chain in PDB entry 1I60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1MSE 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1I60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 11Right-handed 310
Helix 2
2
A
15 26Right-handed alpha
Helix 3
3
A
37 43Right-handed alpha
Helix 4
4
A
47 57Right-handed alpha
Helix 5
5
A
75 97Right-handed alpha
Helix 6
6
A
113 133Right-handed alpha
Helix 7
7
A
134 136Right-handed 310
Helix 8
8
A
153 165Right-handed alpha
Helix 9
9
A
175 181Right-handed alpha
Helix 10
10
A
184 190Right-handed alpha
Helix 11
11
A
192 194Right-handed 310
Helix 12
12
A
213 215Right-handed 310
Helix 13
13
A
226 237Right-handed alpha
Helix 14
14
A
249 255Right-handed 310
Helix 15
15
A
256 273Right-handed alpha
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There are 2 sheets in PDB entry 1I60. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
30 34parallel
Strand 3
A
61 69parallel
Strand 4
A
100 104parallel
Strand 5
A
138 142parallel
Strand 6
A
169 174parallel
Strand 7
A
196 201parallel
Strand 8
A
242 245parallel
Strand 9
A
2 6parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
217 218anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il