Analysis of interatomic Contacts of Structural Units in PDB entry:
1J1J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1J1J entry

There are 4 chains in PDB entry 1J1J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 217
B
 MET 1PHE 217
C
 MET 1PHE 217
D
 MET 1PHE 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1J1J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 43Right-handed alpha
Helix 2
2
A
44 47Right-handed 310
Helix 3
3
A
53 78Right-handed alpha
Helix 4
4
A
79 79Right-handed 310
Helix 5
5
A
80 82Right-handed 310
Helix 6
6
A
83 88Right-handed alpha
Helix 7
7
A
91 111Right-handed alpha
Helix 8
8
A
115 124Right-handed alpha
Helix 9
9
A
136 161Right-handed alpha
Helix 10
10
A
165 182Right-handed alpha
Helix 11
11
A
188 196Right-handed alpha
Helix 12
12
A
197 214Right-handed alpha
Helix 13
13
B
2 44Right-handed alpha
Helix 14
14
B
45 47Right-handed 310
Helix 15
15
B
55 77Right-handed alpha
Helix 16
16
B
78 79Right-handed 310
Helix 17
17
B
80 82Right-handed 310
Helix 18
18
B
83 88Right-handed alpha
Helix 19
19
B
91 111Right-handed alpha
Helix 20
20
B
115 123Right-handed alpha
Helix 21
21
B
136 161Right-handed alpha
Helix 22
22
B
165 183Right-handed alpha
Helix 23
23
B
188 197Right-handed alpha
Helix 24
24
B
197 215Right-handed alpha
Helix 25
25
C
2 44Right-handed alpha
Helix 26
26
C
52 76Right-handed alpha
Helix 27
27
C
83 88Right-handed alpha
Helix 28
28
C
91 111Right-handed alpha
Helix 29
29
C
115 123Right-handed alpha
Helix 30
30
C
136 160Right-handed alpha
Helix 31
31
C
165 184Right-handed alpha
Helix 32
32
C
190 196Right-handed alpha
Helix 33
33
C
197 214Right-handed alpha
Helix 34
34
D
2 44Right-handed alpha
Helix 35
35
D
45 47Right-handed 310
Helix 36
36
D
53 78Right-handed alpha
Helix 37
37
D
80 82Right-handed 310
Helix 38
38
D
83 88Right-handed alpha
Helix 39
39
D
91 111Right-handed alpha
Helix 40
40
D
115 123Right-handed alpha
Helix 41
41
D
136 161Right-handed alpha
Helix 42
42
D
165 184Right-handed alpha
Helix 43
43
D
188 215Right-handed alpha
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There are no sheets in PDB entry 1J1J
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