Analysis of interatomic Contacts of Structural Units in PDB entry:
1JLE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JLE entry

There are 4 chains in PDB entry 1JLE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1LEU 187
A
 VAL 189LEU 279
A
 LYS 281ASP 549
B
 PRO 4ILE 434
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1JLE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 44Right-handed alpha
Helix 2
2
A
77 83Right-handed alpha
Helix 3
3
A
96 100Right-handed 310
Helix 4
4
A
111 118Right-handed 310
Helix 5
5
A
121 126Right-handed alpha
Helix 6
6
A
154 175Right-handed alpha
Helix 7
7
A
194 211Right-handed alpha
Helix 8
8
A
253 269Right-handed alpha
Helix 9
9
A
296 312Right-handed alpha
Helix 10
10
A
363 383Right-handed alpha
Helix 11
11
A
394 403Right-handed alpha
Helix 12
12
A
473 488Right-handed alpha
Helix 13
13
A
499 508Right-handed alpha
Helix 14
14
A
515 528Right-handed alpha
Helix 15
15
A
544 549Right-handed alpha
Helix 16
16
B
27 44Right-handed alpha
Helix 17
17
B
77 84Right-handed alpha
Helix 18
18
B
112 118Right-handed 310
Helix 19
19
B
124 129Right-handed 310
Helix 20
20
B
134 138Right-handed 310
Helix 21
21
B
154 160Right-handed alpha
Helix 22
22
B
160 173Right-handed alpha
Helix 23
23
B
194 211Right-handed alpha
Helix 24
24
B
235 239Right-handed 310
Helix 25
25
B
254 268Right-handed alpha
Helix 26
26
B
276 281Right-handed alpha
Helix 27
27
B
296 311Right-handed alpha
Helix 28
28
B
359 362Right-handed 310
Helix 29
29
B
363 384Right-handed alpha
Helix 30
30
B
394 402Right-handed alpha
Helix 31
31
B
403 406Right-handed 310
Helix 32
32
B
420 428Right-handed alpha
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There are 11 sheets in PDB entry 1JLE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
130 132parallel
Strand 3
A
142 144anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 109first strand
Strand 2
A
187 191anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
232 234anti-parallel
Strand 3
A
239 241anti-parallel
Strand 4
A
315 316anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 355first strand
Strand 2
A
336 344anti-parallel
Strand 3
A
326 333anti-parallel
Strand 4
A
388 391parallel
Strand 5
A
414 416parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
512 513anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 469first strand
Strand 2
A
453 459anti-parallel
Strand 3
A
438 445anti-parallel
Strand 4
A
492 497parallel
Strand 5
A
530 535parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
72 75anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 110first strand
Strand 2
B
186 191anti-parallel
Strand 3
B
179 181anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
142 144anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 253first strand
Strand 2
B
292 293anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 355first strand
Strand 2
B
336 344anti-parallel
Strand 3
B
326 333anti-parallel
Strand 4
B
388 391parallel
Strand 5
B
413 416parallel
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