Analysis of interatomic Contacts of Structural Units in PDB entry:
1JT6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JT6 entry

There are 4 chains in PDB entry 1JT6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
ASN 2SER 187
D
ASN 2SER 187
A
ASN 2SER 187
E
ASN 2SER 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1JT6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
B
5 18Right-handed alpha
Helix 2
2
B
24 33Right-handed alpha
Helix 3
3
B
37 41Right-handed 310
Helix 4
4
B
45 67Right-handed alpha
Helix 5
5
B
68 72Right-handed 310
Helix 6
6
B
74 87Right-handed alpha
Helix 7
7
B
92 94Right-handed 310
Helix 8
8
B
95 105Right-handed alpha
Helix 9
9
B
110 137Right-handed alpha
Helix 10
10
B
144 163Right-handed alpha
Helix 11
11
B
167 187Right-handed alpha
Helix 12
12
D
3 19Right-handed alpha
Helix 13
13
D
24 32Right-handed alpha
Helix 14
14
D
35 43Right-handed alpha
Helix 15
15
D
45 69Right-handed alpha
Helix 16
16
D
70 72Right-handed 310
Helix 17
17
D
74 89Right-handed alpha
Helix 18
18
D
92 94Right-handed 310
Helix 19
19
D
95 105Right-handed alpha
Helix 20
20
D
109 136Right-handed alpha
Helix 21
21
D
144 163Right-handed alpha
Helix 22
22
D
167 186Right-handed alpha
Helix 23
23
A
2 19Right-handed alpha
Helix 24
24
A
24 32Right-handed alpha
Helix 25
25
A
35 44Right-handed alpha
Helix 26
26
A
45 69Right-handed alpha
Helix 27
27
A
70 72Right-handed 310
Helix 28
28
A
74 92Right-handed alpha
Helix 29
29
A
95 104Right-handed alpha
Helix 30
30
A
109 136Right-handed alpha
Helix 31
31
A
144 162Right-handed alpha
Helix 32
32
A
167 185Right-handed alpha
Helix 33
33
E
2 19Right-handed alpha
Helix 34
34
E
24 32Right-handed alpha
Helix 35
35
E
35 43Right-handed alpha
Helix 36
36
E
45 69Right-handed alpha
Helix 37
37
E
70 72Right-handed 310
Helix 38
38
E
74 89Right-handed alpha
Helix 39
39
E
92 94Right-handed 310
Helix 40
40
E
95 107Right-handed alpha
Helix 41
41
E
109 136Right-handed alpha
Helix 42
42
E
144 162Right-handed alpha
Helix 43
43
E
167 185Right-handed alpha
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There are no sheets in PDB entry 1JT6

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