Analysis of interatomic Contacts of Structural Units in PDB entry:
1JXI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JXI entry

There are 2 chains in PDB entry 1JXI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TRP 266
B
 MET 1TRP 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1JXI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 30Right-handed alpha
Helix 2
2
A
56 69Right-handed alpha
Helix 3
3
A
83 97Right-handed alpha
Helix 4
4
A
118 129Right-handed alpha
Helix 5
5
A
130 133Right-handed 310
Helix 6
6
A
139 148Right-handed alpha
Helix 7
7
A
154 168Right-handed alpha
Helix 8
8
A
210 223Right-handed alpha
Helix 9
9
A
224 226Right-handed 310
Helix 10
10
A
228 245Right-handed alpha
Helix 11
11
A
246 250Right-handed 310
Helix 12
12
B
18 30Right-handed alpha
Helix 13
13
B
56 69Right-handed alpha
Helix 14
14
B
83 97Right-handed alpha
Helix 15
15
B
118 129Right-handed alpha
Helix 16
16
B
130 133Right-handed 310
Helix 17
17
B
139 148Right-handed alpha
Helix 18
18
B
154 168Right-handed alpha
Helix 19
19
B
210 223Right-handed alpha
Helix 20
20
B
224 226Right-handed 310
Helix 21
21
B
228 245Right-handed alpha
Helix 22
22
B
246 250Right-handed 310
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There are 2 sheets in PDB entry 1JXI. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 54first strand
Strand 2
A
33 45anti-parallel
Strand 3
A
5 11parallel
Strand 4
A
75 78parallel
Strand 5
A
102 105parallel
Strand 6
A
135 137parallel
Strand 7
A
172 175parallel
Strand 8
A
188 190anti-parallel
Strand 9
A
195 197anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 54first strand
Strand 2
B
33 45anti-parallel
Strand 3
B
5 11parallel
Strand 4
B
75 78parallel
Strand 5
B
102 105parallel
Strand 6
B
135 137parallel
Strand 7
B
172 175parallel
Strand 8
B
188 190anti-parallel
Strand 9
B
195 197anti-parallel
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