Analysis of interatomic Contacts of Structural Units in PDB entry:
1JZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JZQ entry

There is 1 chain in PDB entry 1JZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 821
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 1JZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 25Right-handed alpha
Helix 2
2
A
25 33Right-handed alpha
Helix 3
3
A
56 73Right-handed alpha
Helix 4
4
A
88 99Right-handed alpha
Helix 5
5
A
103 111Right-handed alpha
Helix 6
6
A
111 125Right-handed alpha
Helix 7
7
A
126 137Right-handed alpha
Helix 8
8
A
151 169Right-handed alpha
Helix 9
9
A
189 196Right-handed alpha
Helix 10
10
A
213 218Right-handed 310
Helix 11
11
A
230 237Right-handed 310
Helix 12
12
A
264 269Right-handed alpha
Helix 13
13
A
282 285Right-handed 310
Helix 14
14
A
325 335Right-handed alpha
Helix 15
15
A
351 355Right-handed 310
Helix 16
16
A
358 373Right-handed alpha
Helix 17
17
A
408 410Right-handed 310
Helix 18
18
A
411 422Right-handed alpha
Helix 19
19
A
426 430Right-handed 310
Helix 20
20
A
432 440Right-handed alpha
Helix 21
21
A
472 480Right-handed alpha
Helix 22
22
A
491 496Right-handed alpha
Helix 23
23
A
516 528Right-handed alpha
Helix 24
24
A
535 543Right-handed alpha
Helix 25
25
A
553 556Right-handed 310
Helix 26
26
A
557 570Right-handed alpha
Helix 27
27
A
601 609Right-handed alpha
Helix 28
28
A
610 621Right-handed alpha
Helix 29
29
A
631 642Right-handed alpha
Helix 30
30
A
642 658Right-handed alpha
Helix 31
31
A
674 697Right-handed alpha
Helix 32
32
A
699 712Right-handed alpha
Helix 33
33
A
718 723Right-handed alpha
Helix 34
34
A
724 728Right-handed 310
Helix 35
35
A
733 738Right-handed alpha
Helix 36
36
A
739 755Right-handed alpha
Helix 37
37
A
758 774Right-handed alpha
Helix 38
38
A
780 784Right-handed 310
Helix 39
39
A
795 814Right-handed alpha
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There are 7 sheets in PDB entry 1JZQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
147 148parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
171 181anti-parallel
Strand 3
A
397 406anti-parallel
Strand 4
A
444 445anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 387first strand
Strand 2
A
197 210anti-parallel
Strand 3
A
222 228anti-parallel
Strand 4
A
256 261parallel
Strand 5
A
247 253anti-parallel
Strand 6
A
275 280anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 387first strand
Strand 2
A
197 210anti-parallel
Strand 3
A
222 228anti-parallel
Strand 4
A
317 320parallel
Strand 5
A
239 242anti-parallel
Strand 6
A
303 305parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 424first strand
Strand 2
A
577 581parallel
Strand 3
A
548 551parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 461first strand
Strand 2
A
507 510anti-parallel
Strand 3
A
500 501anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
628 629parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il