Analysis of interatomic Contacts of Structural Units in PDB entry:
1K11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1K11 entry

There are 2 chains in PDB entry 1K11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 58THR 196
B
 ALA 786GLY 797
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 1K11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 98Right-handed alpha
Helix 2
2
A
175 194Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1K11.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 134first strand
Strand 2
A
118 123anti-parallel
Strand 3
A
109 114anti-parallel
Strand 4
A
61 73anti-parallel
Strand 5
A
167 174anti-parallel
Strand 6
A
154 160anti-parallel
Strand 7
A
138 144anti-parallel
Strand 8
B
787 791anti-parallel
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