Analysis of interatomic Contacts of Structural Units in PDB entry:
1KO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KO0 entry

There is 1 chain in PDB entry 1KO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2LEU 420
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1KO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 25Right-handed alpha
Helix 2
2
A
33 42Right-handed alpha
Helix 3
3
A
54 56Right-handed 310
Helix 4
4
A
58 68Right-handed alpha
Helix 5
5
A
76 86Right-handed alpha
Helix 6
6
A
105 116Right-handed alpha
Helix 7
7
A
123 134Right-handed alpha
Helix 8
8
A
170 181Right-handed alpha
Helix 9
9
A
197 216Right-handed alpha
Helix 10
10
A
240 260Right-handed alpha
Helix 11
11
A
270 275Right-handed alpha
Helix 12
12
A
306 312Right-handed alpha
Helix 13
13
A
379 383Right-handed 310
Helix 14
14
A
410 416Right-handed alpha
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There are 2 sheets in PDB entry 1KO0. Click on sheet of interest to get list of strands forming it: A, B,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 406first strand
Strand 2
A
394 398anti-parallel
Strand 3
A
28 32parallel
Strand 4
A
278 290anti-parallel
Strand 5
A
369 373anti-parallel
Strand 6
A
317 320anti-parallel
Strand 7
A
369 373anti-parallel
Strand 8
A
278 290anti-parallel
Strand 9
A
293 298anti-parallel
Strand 10
A
332 338parallel
Strand 11
A
359 362anti-parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
71 74parallel
Strand 3
A
97 101parallel
Strand 4
A
119 121parallel
Strand 5
A
138 144parallel
Strand 6
A
166 167parallel
Strand 7
A
138 144parallel
Strand 8
A
184 189parallel
Strand 9
A
221 223parallel
Strand 10
A
264 267parallel
Strand 11
A
48 52parallel
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