Analysis of interatomic Contacts of Structural Units in PDB entry:
1KZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1KZZ entry

There are 2 chains in PDB entry 1KZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 313PRO 504
B
CYS 1THR 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1KZZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
315 347Right-handed alpha
Helix 2
2
A
360 371Right-handed alpha
Helix 3
3
A
399 403Right-handed 310
Helix 4
4
A
476 481Right-handed alpha
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There are 2 sheets in PDB entry 1KZZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
353 359first strand
Strand 2
A
489 495anti-parallel
Strand 3
A
432 434anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
376 377first strand
Strand 2
A
389 395anti-parallel
Strand 3
A
406 414anti-parallel
Strand 4
A
469 475anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il