Analysis of interatomic Contacts of Structural Units in PDB entry:
1L8A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1L8A entry

There are 2 chains in PDB entry 1L8A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 56ALA 886
B
 ILE 56ALA 886
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 1L8A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 68Right-handed 310
Helix 2
2
A
74 99Right-handed alpha
Helix 3
3
A
107 124Right-handed alpha
Helix 4
4
A
140 142Right-handed 310
Helix 5
5
A
143 154Right-handed alpha
Helix 6
6
A
158 163Right-handed alpha
Helix 7
7
A
195 214Right-handed alpha
Helix 8
8
A
231 234Right-handed 310
Helix 9
9
A
235 240Right-handed alpha
Helix 10
10
A
241 248Right-handed alpha
Helix 11
11
A
273 285Right-handed alpha
Helix 12
12
A
297 305Right-handed alpha
Helix 13
13
A
308 317Right-handed alpha
Helix 14
14
A
318 327Right-handed alpha
Helix 15
15
A
329 337Right-handed alpha
Helix 16
16
A
338 340Right-handed 310
Helix 17
17
A
341 346Right-handed alpha
Helix 18
18
A
352 358Right-handed alpha
Helix 19
19
A
361 364Right-handed 310
Helix 20
20
A
365 379Right-handed alpha
Helix 21
21
A
414 424Right-handed alpha
Helix 22
22
A
432 436Right-handed 310
Helix 23
23
A
445 457Right-handed alpha
Helix 24
24
A
477 480Right-handed 310
Helix 25
25
A
481 486Right-handed alpha
Helix 26
26
A
493 506Right-handed alpha
Helix 27
27
A
511 513Right-handed 310
Helix 28
28
A
523 527Right-handed 310
Helix 29
29
A
528 536Right-handed alpha
Helix 30
30
A
570 583Right-handed alpha
Helix 31
31
A
583 588Right-handed alpha
Helix 32
32
A
603 617Right-handed alpha
Helix 33
33
A
644 650Right-handed alpha
Helix 34
34
A
662 679Right-handed alpha
Helix 35
35
A
705 712Right-handed alpha
Helix 36
36
A
734 750Right-handed alpha
Helix 37
37
A
760 778Right-handed alpha
Helix 38
38
A
786 792Right-handed alpha
Helix 39
39
A
805 810Right-handed alpha
Helix 40
40
A
811 815Right-handed 310
Helix 41
41
A
833 841Right-handed alpha
Helix 42
42
A
844 859Right-handed alpha
Helix 43
43
A
863 874Right-handed alpha
Helix 44
44
B
64 68Right-handed 310
Helix 45
45
B
74 99Right-handed alpha
Helix 46
46
B
107 124Right-handed alpha
Helix 47
47
B
140 142Right-handed 310
Helix 48
48
B
143 154Right-handed alpha
Helix 49
49
B
158 164Right-handed alpha
Helix 50
50
B
195 214Right-handed alpha
Helix 51
51
B
231 234Right-handed 310
Helix 52
52
B
235 240Right-handed alpha
Helix 53
53
B
242 248Right-handed alpha
Helix 54
54
B
273 285Right-handed alpha
Helix 55
55
B
297 305Right-handed alpha
Helix 56
56
B
308 317Right-handed alpha
Helix 57
57
B
318 327Right-handed alpha
Helix 58
58
B
329 337Right-handed alpha
Helix 59
59
B
338 340Right-handed 310
Helix 60
60
B
341 348Right-handed alpha
Helix 61
61
B
352 358Right-handed alpha
Helix 62
62
B
361 364Right-handed 310
Helix 63
63
B
365 379Right-handed alpha
Helix 64
64
B
417 424Right-handed alpha
Helix 65
65
B
445 458Right-handed alpha
Helix 66
66
B
478 480Right-handed 310
Helix 67
67
B
481 486Right-handed alpha
Helix 68
68
B
493 506Right-handed alpha
Helix 69
69
B
511 513Right-handed 310
Helix 70
70
B
523 527Right-handed 310
Helix 71
71
B
530 535Right-handed alpha
Helix 72
72
B
570 583Right-handed alpha
Helix 73
73
B
583 588Right-handed alpha
Helix 74
74
B
603 617Right-handed alpha
Helix 75
75
B
644 650Right-handed alpha
Helix 76
76
B
662 679Right-handed alpha
Helix 77
77
B
705 712Right-handed alpha
Helix 78
78
B
734 750Right-handed alpha
Helix 79
79
B
760 778Right-handed alpha
Helix 80
80
B
786 791Right-handed 310
Helix 81
81
B
805 810Right-handed alpha
Helix 82
82
B
811 815Right-handed 310
Helix 83
83
B
833 841Right-handed alpha
Helix 84
84
B
844 859Right-handed alpha
Helix 85
85
B
863 874Right-handed alpha
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There are 7 sheets in PDB entry 1L8A. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
224 229parallel
Strand 3
A
253 259parallel
Strand 4
A
384 389parallel
Strand 5
A
288 292parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
266 267anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 566first strand
Strand 2
A
515 519parallel
Strand 3
A
593 599parallel
Strand 4
A
622 626parallel
Strand 5
A
686 690parallel
Strand 6
A
655 658parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
714 722first strand
Strand 2
A
751 757anti-parallel
Strand 3
A
724 730parallel
Strand 4
A
797 800parallel
Strand 5
A
820 823parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
224 229parallel
Strand 3
B
253 259parallel
Strand 4
B
384 389parallel
Strand 5
B
288 292parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
565 566first strand
Strand 2
B
515 519parallel
Strand 3
B
593 599parallel
Strand 4
B
622 626parallel
Strand 5
B
686 690parallel
Strand 6
B
655 658parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
714 722first strand
Strand 2
B
751 757anti-parallel
Strand 3
B
724 730parallel
Strand 4
B
797 800parallel
Strand 5
B
820 823parallel
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