Analysis of interatomic Contacts of Structural Units in PDB entry:
1LI4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LI4 entry

There is 1 chain in PDB entry 1LI4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3TYR 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1LI4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
14 27Right-handed alpha
Helix 3
3
A
29 40Right-handed alpha
Helix 4
4
A
57 70Right-handed alpha
Helix 5
5
A
85 95Right-handed alpha
Helix 6
6
A
106 116Right-handed alpha
Helix 7
7
A
133 143Right-handed alpha
Helix 8
8
A
144 150Right-handed 310
Helix 9
9
A
157 170Right-handed alpha
Helix 10
10
A
183 188Right-handed alpha
Helix 11
11
A
189 208Right-handed alpha
Helix 12
12
A
222 235Right-handed alpha
Helix 13
13
A
245 255Right-handed alpha
Helix 14
14
A
261 266Right-handed alpha
Helix 15
15
A
283 288Right-handed alpha
Helix 16
16
A
307 315Right-handed alpha
Helix 17
17
A
341 343Right-handed 310
Helix 18
18
A
344 349Right-handed alpha
Helix 19
19
A
354 375Right-handed alpha
Helix 20
20
A
376 379Right-handed 310
Helix 21
21
A
387 400Right-handed alpha
Helix 22
22
A
410 418Right-handed alpha
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There are 3 sheets in PDB entry 1LI4. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
99 101parallel
Strand 3
A
73 77parallel
Strand 4
A
49 53parallel
Strand 5
A
127 130parallel
Strand 6
A
152 155parallel
Strand 7
A
176 179parallel
Strand 8
A
382 384parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
123 124anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
238 242parallel
Strand 3
A
215 219parallel
Strand 4
A
271 274parallel
Strand 5
A
294 298parallel
Strand 6
A
335 339parallel
Strand 7
A
325 329anti-parallel
Strand 8
A
317 322anti-parallel
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