Analysis of interatomic Contacts of Structural Units in PDB entry:
1M2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M2V entry

There are 2 chains in PDB entry 1M2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ALA 768
B
 PHE 61LYS 926
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 1M2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
22 29Right-handed alpha
Helix 3
3
A
90 94Right-handed 310
Helix 4
4
A
102 106Right-handed 310
Helix 5
5
A
133 149Right-handed alpha
Helix 6
6
A
189 198Right-handed alpha
Helix 7
7
A
223 227Right-handed 310
Helix 8
8
A
234 244Right-handed alpha
Helix 9
9
A
261 278Right-handed alpha
Helix 10
10
A
310 316Right-handed alpha
Helix 11
11
A
321 340Right-handed alpha
Helix 12
12
A
354 365Right-handed alpha
Helix 13
13
A
377 387Right-handed alpha
Helix 14
14
A
516 522Right-handed alpha
Helix 15
15
A
524 542Right-handed alpha
Helix 16
16
A
547 564Right-handed alpha
Helix 17
17
A
582 591Right-handed alpha
Helix 18
18
A
602 614Right-handed alpha
Helix 19
19
A
617 626Right-handed alpha
Helix 20
20
A
644 648Right-handed 310
Helix 21
21
A
667 675Right-handed alpha
Helix 22
22
A
677 683Right-handed 310
Helix 23
23
A
684 703Right-handed alpha
Helix 24
24
A
720 726Right-handed alpha
Helix 25
25
A
751 764Right-handed alpha
Helix 26
26
B
63 73Right-handed alpha
Helix 27
27
B
152 156Right-handed 310
Helix 28
28
B
164 168Right-handed 310
Helix 29
29
B
192 200Right-handed alpha
Helix 30
30
B
263 267Right-handed 310
Helix 31
31
B
273 279Right-handed 310
Helix 32
32
B
280 285Right-handed alpha
Helix 33
33
B
293 297Right-handed 310
Helix 34
34
B
313 319Right-handed alpha
Helix 35
35
B
320 332Right-handed alpha
Helix 36
36
B
399 414Right-handed alpha
Helix 37
37
B
423 436Right-handed alpha
Helix 38
38
B
470 476Right-handed alpha
Helix 39
39
B
481 494Right-handed alpha
Helix 40
40
B
508 518Right-handed alpha
Helix 41
41
B
533 550Right-handed alpha
Helix 42
42
B
638 645Right-handed alpha
Helix 43
43
B
647 666Right-handed alpha
Helix 44
44
B
668 690Right-handed alpha
Helix 45
45
B
706 708Right-handed 310
Helix 46
46
B
709 719Right-handed alpha
Helix 47
47
B
729 743Right-handed alpha
Helix 48
48
B
744 753Right-handed alpha
Helix 49
49
B
818 822Right-handed 310
Helix 50
50
B
848 859Right-handed alpha
Helix 51
51
B
889 901Right-handed alpha
Helix 52
52
B
912 925Right-handed alpha
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There are 12 sheets in PDB entry 1M2V. Click on sheet of interest to get list of strands forming it: 1, 4, 5, 16, 24, 27, 31, 32, 35, 36, 41, 56,

There are 3 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
456 461anti-parallel
Strand 3
A
413 418anti-parallel
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There are 8 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 113first strand
Strand 2
A
500 512anti-parallel
Strand 3
A
19 20parallel
Strand 4
A
500 512parallel
Strand 5
A
484 494anti-parallel
Strand 6
A
399 408anti-parallel
Strand 7
A
444 450anti-parallel
Strand 8
A
422 423anti-parallel
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There are 2 strands in 5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
86 88anti-parallel
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There are 15 strands in 16 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 348first strand
Strand 2
A
282 288parallel
Strand 3
A
123 129parallel
Strand 4
A
156 162parallel
Strand 5
A
229 230anti-parallel
Strand 6
A
156 162anti-parallel
Strand 7
A
165 170anti-parallel
Strand 8
A
178 183anti-parallel
Strand 9
B
374 378parallel
Strand 10
B
354 358anti-parallel
Strand 11
B
347 350anti-parallel
Strand 12
B
306 311parallel
Strand 13
B
440 446parallel
Strand 14
B
495 503parallel
Strand 15
B
523 527parallel
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There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 575first strand
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There are 4 strands in 27 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
628 632first strand
Strand 2
A
653 657anti-parallel
Strand 3
A
661 666anti-parallel
Strand 4
A
710 715parallel
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There are 1 strands in 31 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
702 704first strand
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There are 3 strands in 32 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 207first strand
Strand 2
B
594 600anti-parallel
Strand 3
B
566 572anti-parallel
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There are 7 strands in 35 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 291first strand
Strand 2
B
623 636anti-parallel
Strand 3
B
189 190parallel
Strand 4
B
623 636parallel
Strand 5
B
608 619anti-parallel
Strand 6
B
553 562anti-parallel
Strand 7
B
582 588anti-parallel
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There are 2 strands in 36 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 252first strand
Strand 2
B
259 261anti-parallel
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There are 1 strands in 41 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
394 395first strand
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There are 3 strands in 56 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
799 803first strand
Strand 2
B
807 812anti-parallel
Strand 3
B
870 874parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il