Analysis of interatomic Contacts of Structural Units in PDB entry:
1M6X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M6X entry

There are 12 chains in PDB entry 1M6X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
T 1 C 13
I
T 14 T 32
F
T 1 C 13
J
T 14 C 33
G
T 1 C 33
H
T 1 C 33
A
SER 2ARG 422
B
SER 2ARG 422
C
SER 2THR 342
C
THR 344ARG 422
D
SER 2THR 342
D
THR 344ARG 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 1M6X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 10Right-handed alpha
Helix 2
2
A
11 22Right-handed alpha
Helix 3
3
A
27 32Right-handed alpha
Helix 4
4
A
34 48Right-handed alpha
Helix 5
5
A
53 68Right-handed alpha
Helix 6
6
A
85 97Right-handed alpha
Helix 7
7
A
115 127Right-handed alpha
Helix 8
8
A
136 150Right-handed alpha
Helix 9
9
A
153 167Right-handed alpha
Helix 10
10
A
171 189Right-handed alpha
Helix 11
11
A
191 197Right-handed alpha
Helix 12
12
A
240 250Right-handed alpha
Helix 13
13
A
278 291Right-handed alpha
Helix 14
14
A
293 298Right-handed 310
Helix 15
15
A
305 318Right-handed alpha
Helix 16
16
A
320 329Right-handed alpha
Helix 17
17
A
351 359Right-handed alpha
Helix 18
18
A
379 390Right-handed alpha
Helix 19
19
A
395 400Right-handed alpha
Helix 20
20
A
408 422Right-handed alpha
Helix 21
21
B
2 10Right-handed alpha
Helix 22
22
B
11 22Right-handed alpha
Helix 23
23
B
27 32Right-handed alpha
Helix 24
24
B
34 48Right-handed alpha
Helix 25
25
B
53 68Right-handed alpha
Helix 26
26
B
85 97Right-handed alpha
Helix 27
27
B
115 127Right-handed alpha
Helix 28
28
B
139 150Right-handed alpha
Helix 29
29
B
153 167Right-handed alpha
Helix 30
30
B
171 189Right-handed alpha
Helix 31
31
B
191 197Right-handed alpha
Helix 32
32
B
240 250Right-handed alpha
Helix 33
33
B
278 291Right-handed alpha
Helix 34
34
B
293 298Right-handed 310
Helix 35
35
B
305 319Right-handed alpha
Helix 36
36
B
320 329Right-handed alpha
Helix 37
37
B
351 360Right-handed alpha
Helix 38
38
B
379 390Right-handed alpha
Helix 39
39
B
395 400Right-handed alpha
Helix 40
40
B
408 421Right-handed alpha
Helix 41
41
C
2 10Right-handed alpha
Helix 42
42
C
11 22Right-handed alpha
Helix 43
43
C
27 32Right-handed alpha
Helix 44
44
C
34 48Right-handed alpha
Helix 45
45
C
53 68Right-handed alpha
Helix 46
46
C
85 97Right-handed alpha
Helix 47
47
C
115 127Right-handed alpha
Helix 48
48
C
137 149Right-handed alpha
Helix 49
49
C
153 167Right-handed alpha
Helix 50
50
C
171 189Right-handed alpha
Helix 51
51
C
191 197Right-handed alpha
Helix 52
52
C
240 250Right-handed alpha
Helix 53
53
C
278 291Right-handed alpha
Helix 54
54
C
293 298Right-handed 310
Helix 55
55
C
305 318Right-handed alpha
Helix 56
56
C
320 329Right-handed alpha
Helix 57
57
C
336 343Right-handed alpha
Helix 58
58
C
351 359Right-handed alpha
Helix 59
59
C
379 389Right-handed alpha
Helix 60
60
C
395 400Right-handed alpha
Helix 61
61
C
408 421Right-handed alpha
Helix 62
62
D
2 10Right-handed alpha
Helix 63
63
D
11 22Right-handed alpha
Helix 64
64
D
27 32Right-handed alpha
Helix 65
65
D
34 48Right-handed alpha
Helix 66
66
D
53 68Right-handed alpha
Helix 67
67
D
85 97Right-handed alpha
Helix 68
68
D
115 127Right-handed alpha
Helix 69
69
D
137 149Right-handed alpha
Helix 70
70
D
153 167Right-handed alpha
Helix 71
71
D
171 189Right-handed alpha
Helix 72
72
D
191 197Right-handed alpha
Helix 73
73
D
199 203Right-handed 310
Helix 74
74
D
240 250Right-handed alpha
Helix 75
75
D
278 291Right-handed alpha
Helix 76
76
D
293 298Right-handed 310
Helix 77
77
D
305 319Right-handed alpha
Helix 78
78
D
320 329Right-handed alpha
Helix 79
79
D
336 344Right-handed alpha
Helix 80
80
D
351 360Right-handed alpha
Helix 81
81
D
379 389Right-handed alpha
Helix 82
82
D
395 400Right-handed alpha
Helix 83
83
D
408 421Right-handed alpha
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There are 16 sheets in PDB entry 1M6X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 71first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
101 106parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
198 208first strand
Strand 2
A
212 219anti-parallel
Strand 3
A
228 232anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
255 256first strand
Strand 2
A
272 273anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
362 364first strand
Strand 2
A
371 373anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
69 71first strand
Strand 2
B
76 81anti-parallel
Strand 3
B
101 106parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
198 208first strand
Strand 2
B
212 219anti-parallel
Strand 3
B
228 232anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
255 256first strand
Strand 2
B
272 273anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
362 364first strand
Strand 2
B
371 373anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
69 71first strand
Strand 2
C
76 81anti-parallel
Strand 3
C
101 106parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
198 208first strand
Strand 2
C
212 219anti-parallel
Strand 3
C
228 232anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
255 256first strand
Strand 2
C
272 273anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
362 365first strand
Strand 2
C
370 373anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
69 71first strand
Strand 2
D
76 81anti-parallel
Strand 3
D
101 106parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
204 208first strand
Strand 2
D
212 219anti-parallel
Strand 3
D
228 232anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
255 256first strand
Strand 2
D
272 273anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
362 365first strand
Strand 2
D
370 373anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il