Analysis of interatomic Contacts of Structural Units in PDB entry:
1M8Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M8Z entry

There is 1 chain in PDB entry 1M8Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 828LYS 1166
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1M8Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
830 838Right-handed alpha
Helix 2
2
A
845 850Right-handed 310
Helix 3
3
A
852 858Right-handed alpha
Helix 4
4
A
859 873Right-handed alpha
Helix 5
5
A
874 886Right-handed alpha
Helix 6
6
A
888 894Right-handed alpha
Helix 7
7
A
897 909Right-handed alpha
Helix 8
8
A
910 922Right-handed alpha
Helix 9
9
A
924 930Right-handed alpha
Helix 10
10
A
933 945Right-handed alpha
Helix 11
11
A
946 956Right-handed alpha
Helix 12
12
A
960 967Right-handed alpha
Helix 13
13
A
969 981Right-handed alpha
Helix 14
14
A
982 985Right-handed 310
Helix 15
15
A
986 993Right-handed alpha
Helix 16
16
A
996 1002Right-handed alpha
Helix 17
17
A
1005 1017Right-handed alpha
Helix 18
18
A
1018 1032Right-handed alpha
Helix 19
19
A
1032 1037Right-handed alpha
Helix 20
20
A
1041 1053Right-handed alpha
Helix 21
21
A
1054 1066Right-handed alpha
Helix 22
22
A
1068 1074Right-handed alpha
Helix 23
23
A
1077 1089Right-handed alpha
Helix 24
24
A
1090 1104Right-handed alpha
Helix 25
25
A
1111 1117Right-handed alpha
Helix 26
26
A
1120 1132Right-handed alpha
Helix 27
27
A
1133 1143Right-handed alpha
Helix 28
28
A
1144 1146Right-handed 310
Helix 29
29
A
1147 1152Right-handed alpha
Helix 30
30
A
1153 1154Right-handed 310
Helix 31
31
A
1155 1155Right-handed 310
Helix 32
32
A
1156 1165Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1M8Z.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1105 1106first strand
Strand 2
A
1109 1110anti-parallel
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