Analysis of interatomic Contacts of Structural Units in PDB entry:
1MAQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MAQ entry

There is 1 chain in PDB entry 1MAQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 3LYS 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1MAQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
H1
A
16 26Right-handed alpha
Helix 2
H2
A
51 63Right-handed alpha
Helix 3
H3
A
77 88Right-handed alpha
Helix 4
H4
A
93 97Right-handed alpha
Helix 5
H5
A
108 122Right-handed alpha
Helix 6
H6
A
141 150Right-handed alpha
Helix 7
H7
A
170 179Right-handed alpha
Helix 8
H8
A
202 215Right-handed alpha
Helix 9
H9
A
233 246Right-handed alpha
Helix 10
H10
A
277 293Right-handed alpha
Helix 11
H11
A
300 311Right-handed alpha
Helix 12
H12
A
313 344Right-handed alpha
Helix 13
H13
A
351 355Right-handed alpha
Helix 14
H14
A
367 377Right-handed alpha
Helix 15
H15
A
394 409Right-handed alpha
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There are 3 sheets in PDB entry 1MAQ. Click on sheet of interest to get list of strands forming it: S1, S2, S3,

There are 7 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
99 105first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
250 255anti-parallel
Strand 4
A
218 223parallel
Strand 5
A
184 189parallel
Strand 6
A
129 137parallel
Strand 7
A
154 158parallel
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There are 2 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
33 35first strand
Strand 2
A
378 380parallel
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There are 2 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
359 363first strand
Strand 2
A
385 389anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il