Analysis of interatomic Contacts of Structural Units in PDB entry:
1MVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MVL entry

There is 1 chain in PDB entry 1MVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 19GLN 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1MVL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
29 33Right-handed 310
Helix 2
2
A
34 44Right-handed alpha
Helix 3
3
A
54 59Right-handed 310
Helix 4
4
A
61 65Right-handed 310
Helix 5
5
A
75 81Right-handed alpha
Helix 6
6
A
88 97Right-handed alpha
Helix 7
7
A
106 116Right-handed alpha
Helix 8
8
A
120 128Right-handed alpha
Helix 9
9
A
142 148Right-handed alpha
Helix 10
10
A
148 162Right-handed alpha
Helix 11
11
A
185 200Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1MVL.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
70 72first strand
Strand 2
A
47 52parallel
Strand 3
A
21 26parallel
Strand 4
A
99 105parallel
Strand 5
A
135 139parallel
Strand 6
A
164 165parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il