Analysis of interatomic Contacts of Structural Units in PDB entry:
1MWT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MWT entry

There are 2 chains in PDB entry 1MWT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 27GLU 668
B
ASP 27GLU 668
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 57 helices in PDB entry 1MWT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
41 48Right-handed alpha
Helix 3
3
A
50 64Right-handed alpha
Helix 4
4
A
64 74Right-handed alpha
Helix 5
5
A
128 132Right-handed 310
Helix 6
6
A
182 190Right-handed alpha
Helix 7
7
A
193 202Right-handed alpha
Helix 8
8
A
221 232Right-handed alpha
Helix 9
9
A
245 248Right-handed 310
Helix 10
10
A
249 254Right-handed alpha
Helix 11
11
A
260 265Right-handed alpha
Helix 12
12
A
266 270Right-handed 310
Helix 13
13
A
282 287Right-handed alpha
Helix 14
14
A
287 292Right-handed alpha
Helix 15
15
A
329 339Right-handed alpha
Helix 16
16
A
368 374Right-handed alpha
Helix 17
17
A
376 385Right-handed alpha
Helix 18
19
A
404 416Right-handed alpha
Helix 19
20
A
435 439Right-handed 310
Helix 20
21
A
455 461Right-handed alpha
Helix 21
22
A
463 475Right-handed alpha
Helix 22
23
A
475 487Right-handed alpha
Helix 23
24
A
510 518Right-handed alpha
Helix 24
25
A
527 537Right-handed alpha
Helix 25
26
A
538 540Right-handed 310
Helix 26
27
A
564 581Right-handed alpha
Helix 27
28
A
641 657Right-handed alpha
Helix 28
29
A
658 661Right-handed 310
Helix 29
30
B
27 39Right-handed alpha
Helix 30
31
B
41 48Right-handed alpha
Helix 31
32
B
50 58Right-handed alpha
Helix 32
33
B
58 64Right-handed alpha
Helix 33
34
B
64 74Right-handed alpha
Helix 34
35
B
128 132Right-handed 310
Helix 35
36
B
182 190Right-handed alpha
Helix 36
37
B
193 203Right-handed alpha
Helix 37
38
B
221 231Right-handed alpha
Helix 38
39
B
245 248Right-handed 310
Helix 39
40
B
249 254Right-handed alpha
Helix 40
41
B
262 266Right-handed 310
Helix 41
42
B
282 287Right-handed alpha
Helix 42
43
B
287 292Right-handed alpha
Helix 43
44
B
329 339Right-handed alpha
Helix 44
45
B
368 373Right-handed alpha
Helix 45
46
B
376 385Right-handed alpha
Helix 46
48
B
404 416Right-handed alpha
Helix 47
49
B
435 439Right-handed 310
Helix 48
50
B
454 461Right-handed alpha
Helix 49
51
B
463 486Right-handed alpha
Helix 50
52
B
510 519Right-handed alpha
Helix 51
53
B
527 536Right-handed alpha
Helix 52
54
B
537 540Right-handed 310
Helix 53
55
B
566 581Right-handed alpha
Helix 54
56
B
583 588Right-handed alpha
Helix 55
57
B
636 640Right-handed 310
Helix 56
58
B
641 658Right-handed alpha
Helix 57
59
B
659 661Right-handed 310
Back to top of page

There are 17 sheets in PDB entry 1MWT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 85first strand
Strand 2
A
92 103anti-parallel
Strand 3
A
106 118anti-parallel
Strand 4
A
123 125anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
140 147first strand
Strand 2
A
296 303anti-parallel
Strand 3
A
308 316anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
234 242first strand
Strand 2
A
161 173anti-parallel
Strand 3
A
154 155anti-parallel
Strand 4
A
324 325parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
234 242first strand
Strand 2
A
161 173anti-parallel
Strand 3
A
212 217anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
255 258first strand
Strand 2
A
277 281anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
357 363first strand
Strand 2
A
345 350anti-parallel
Strand 3
A
628 634anti-parallel
Strand 4
A
613 621anti-parallel
Strand 5
A
594 602anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
424 427first strand
Strand 2
A
451 454anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
431 432first strand
Strand 2
A
443 444anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
544 545first strand
Strand 2
A
557 559anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
77 86first strand
Strand 2
B
93 103anti-parallel
Strand 3
B
106 118anti-parallel
Strand 4
B
123 125anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
140 147first strand
Strand 2
B
296 303anti-parallel
Strand 3
B
309 316anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
234 242first strand
Strand 2
B
161 173anti-parallel
Strand 3
B
154 155anti-parallel
Strand 4
B
324 325parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
234 242first strand
Strand 2
B
161 173anti-parallel
Strand 3
B
212 217anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
255 258first strand
Strand 2
B
277 281anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
357 363first strand
Strand 2
B
345 350anti-parallel
Strand 3
B
628 634anti-parallel
Strand 4
B
614 621anti-parallel
Strand 5
B
594 601anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
425 427first strand
Strand 2
B
451 453anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
544 545first strand
Strand 2
B
557 559anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il